CircRNA Information

General Information
circRNA Basic Information
CircID chr19:44819116|44819471
Strand +
CircType exon
Host Gene ENSG00000187244.9;
Algorism CIRI2;
Sequence ATGGCGCTTGTTCCCGTGGGGGTTGGAGGCTTCACAGGAGATGCCATCGCGGCTCAGGGCGCTGGTCACTTTCAGGGTCAGAGAGCTGCTCACCCAACCCTGCCGTCCGGGGATTGGCTCTGCGGGCTATGGAGGCTCCGATCAGGCCCCGGCTGGTGGGGTCAAGGGGTGGGGTCAAGGGCAGAGGTGAACGACGTCCAGTCTCCCAGGAAGTGGAAAGGAGGGTGTGATACTTGGATGAGTGAGAGGGGGCTCAGGGTGGAGAGGAAGGTCCCTTACGCTGCCCCCCAATTGGCTCCAGCTGAGTTTGGGGTCTGGATGGCCGCGGGCAGAGCAGATGAGTGTGACTTCGTCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:44819116|44819471 hsa-miR-224-5p 0 0 1
chr19:44819116|44819471 hsa-miR-224-3p 0 0 1
chr19:44819116|44819471 hsa-miR-504-5p 0 0 1
chr19:44819116|44819471 hsa-miR-504-3p 0 0 1
chr19:44819116|44819471 hsa-miR-646 0 1 1
chr19:44819116|44819471 hsa-miR-938 0 0 1
chr19:44819116|44819471 hsa-miR-1226-5p 0 0 1
chr19:44819116|44819471 hsa-miR-1226-3p 0 0 1
chr19:44819116|44819471 hsa-miR-1228-5p 0 0 1
chr19:44819116|44819471 hsa-miR-1228-3p 0 0 1
chr19:44819116|44819471 hsa-miR-1262 0 0 1
chr19:44819116|44819471 hsa-miR-1275 0 0 1
chr19:44819116|44819471 hsa-miR-512-5p 0 0 1
chr19:44819116|44819471 hsa-miR-1225-3p 1 0 1
chr19:44819116|44819471 hsa-miR-486-3p 0 0 1
chr19:44819116|44819471 hsa-miR-885-3p 0 0 1
chr19:44819116|44819471 hsa-miR-296-3p 1 1 1
chr19:44819116|44819471 hsa-miR-1207-3p 0 0 1
chr19:44819116|44819471 hsa-miR-767-3p 0 0 1
chr19:44819116|44819471 hsa-miR-1207-5p 0 1 1
chr19:44819116|44819471 hsa-miR-324-3p 0 0 1
chr19:44819116|44819471 hsa-miR-125a-5p 1 1 1
chr19:44819116|44819471 hsa-miR-1233 0 0 1
chr19:44819116|44819471 hsa-miR-125b 0 0 1
chr19:44819116|44819471 hsa-miR-1201 0 0 1
chr19:44819116|44819471 hsa-miR-220a 0 0 1
chr19:44819116|44819471 hsa-miR-346 1 0 0
chr19:44819116|44819471 hsa-miR-1291 1 1 0
chr19:44819116|44819471 hsa-miR-1470 1 0 0
chr19:44819116|44819471 hsa-miR-3196 1 0 0
chr19:44819116|44819471 hsa-miR-4319 0 1 0
chr19:44819116|44819471 hsa-miR-4254 1 0 0
chr19:44819116|44819471 hsa-miR-4290 1 0 0
chr19:44819116|44819471 hsa-miR-3609 0 1 0
chr19:44819116|44819471 hsa-miR-3651 0 1 0
chr19:44819116|44819471 hsa-miR-3135b 0 1 0
chr19:44819116|44819471 hsa-miR-4522 1 0 0
chr19:44819116|44819471 hsa-miR-4642 0 1 0
chr19:44819116|44819471 hsa-miR-4660 0 1 0
chr19:44819116|44819471 hsa-miR-4681 0 1 0
chr19:44819116|44819471 hsa-miR-4686 0 1 0
chr19:44819116|44819471 hsa-miR-4688 0 1 0
chr19:44819116|44819471 hsa-miR-4780 0 1 0
chr19:44819116|44819471 hsa-miR-5193 1 1 0
chr19:44819116|44819471 hsa-miR-7703 1 0 0
chr19:44819116|44819471 hsa-miR-7976 1 0 0
chr19:44819116|44819471 hsa-miR-12125 0 1 0
chr19:44819116|44819471 hsa-miR-6749-3p 1 0 0
chr19:44819116|44819471 hsa-miR-18a-3p 0 1 0
chr19:44819116|44819471 hsa-miR-4665-3p 1 0 0
chr19:44819116|44819471 hsa-miR-205-5p 1 0 0
chr19:44819116|44819471 hsa-miR-210-5p 1 0 0
chr19:44819116|44819471 hsa-miR-7851-3p 1 1 0
chr19:44819116|44819471 hsa-miR-3192-5p 0 1 0
chr19:44819116|44819471 hsa-miR-3677-5p 0 1 0
chr19:44819116|44819471 hsa-miR-296-5p 1 1 0
chr19:44819116|44819471 hsa-miR-6875-3p 1 0 0
chr19:44819116|44819471 hsa-miR-6727-5p 1 0 0
chr19:44819116|44819471 hsa-miR-6849-3p 1 0 0
chr19:44819116|44819471 hsa-miR-7110-3p 1 0 0
chr19:44819116|44819471 hsa-miR-6817-3p 0 1 0
chr19:44819116|44819471 hsa-miR-6787-3p 0 1 0
chr19:44819116|44819471 hsa-miR-6845-3p 1 1 0
chr19:44819116|44819471 hsa-miR-423-3p 1 0 0
chr19:44819116|44819471 hsa-miR-877-3p 0 1 0
chr19:44819116|44819471 hsa-miR-6728-3p 1 1 0
chr19:44819116|44819471 hsa-miR-6788-3p 1 0 0
chr19:44819116|44819471 hsa-miR-4436b-5p 1 0 0
chr19:44819116|44819471 hsa-miR-939-3p 1 1 0
chr19:44819116|44819471 hsa-miR-4793-5p 1 0 0
chr19:44819116|44819471 hsa-miR-6784-5p 0 1 0
chr19:44819116|44819471 hsa-miR-30c-2-3p 0 1 0
chr19:44819116|44819471 hsa-miR-5001-3p 0 1 0
chr19:44819116|44819471 hsa-miR-7161-3p 0 1 0
chr19:44819116|44819471 hsa-miR-3667-3p 1 1 0
chr19:44819116|44819471 hsa-miR-6823-5p 0 1 0
chr19:44819116|44819471 hsa-miR-659-5p 0 1 0
chr19:44819116|44819471 hsa-miR-7111-3p 1 1 0
chr19:44819116|44819471 hsa-miR-7843-3p 0 1 0
chr19:44819116|44819471 hsa-miR-6769a-3p 1 0 0
chr19:44819116|44819471 hsa-miR-103b 0 1 0
chr19:44819116|44819471 hsa-miR-6892-5p 0 1 0
chr19:44819116|44819471 hsa-miR-181b-5p 0 1 0
chr19:44819116|44819471 hsa-miR-4687-5p 1 1 0
chr19:44819116|44819471 hsa-miR-6813-3p 1 0 0
chr19:44819116|44819471 hsa-miR-873-3p 0 1 0
chr19:44819116|44819471 hsa-miR-6828-3p 0 1 0
chr19:44819116|44819471 hsa-miR-4758-3p 0 1 0
chr19:44819116|44819471 hsa-miR-6887-3p 1 0 0
chr19:44819116|44819471 hsa-miR-6782-3p 1 0 0
chr19:44819116|44819471 hsa-miR-7848-3p 1 0 0
chr19:44819116|44819471 hsa-miR-6865-3p 1 1 0
chr19:44819116|44819471 hsa-miR-4529-5p 0 1 0
chr19:44819116|44819471 hsa-miR-1914-5p 1 0 0
chr19:44819116|44819471 hsa-miR-5088-3p 1 0 0
chr19:44819116|44819471 hsa-miR-6738-3p 1 0 0
chr19:44819116|44819471 hsa-miR-6777-3p 1 0 0
chr19:44819116|44819471 hsa-miR-3124-3p 0 1 0
chr19:44819116|44819471 hsa-miR-3620-3p 1 1 0
chr19:44819116|44819471 hsa-miR-4433a-5p 1 0 0
chr19:44819116|44819471 hsa-miR-1229-3p 1 0 0
chr19:44819116|44819471 hsa-miR-4433b-5p 1 0 0
chr19:44819116|44819471 hsa-miR-6759-3p 1 1 0
chr19:44819116|44819471 hsa-miR-3162-3p 1 1 0
chr19:44819116|44819471 hsa-miR-4714-5p 0 1 0
chr19:44819116|44819471 hsa-miR-4763-3p 0 1 0
chr19:44819116|44819471 hsa-miR-328-5p 1 1 0
chr19:44819116|44819471 hsa-miR-6885-5p 0 1 0
chr19:44819116|44819471 hsa-miR-30c-1-3p 0 1 0
chr19:44819116|44819471 hsa-miR-1199-5p 0 1 0
chr19:44819116|44819471 hsa-miR-6736-5p 0 1 0
chr19:44819116|44819471 hsa-miR-6877-3p 1 1 0
chr19:44819116|44819471 hsa-miR-6762-5p 1 0 0
chr19:44819116|44819471 hsa-miR-6792-3p 1 0 0
chr19:44819116|44819471 hsa-miR-6801-3p 1 0 0
chr19:44819116|44819471 hsa-miR-6805-3p 1 1 0
chr19:44819116|44819471 hsa-miR-3059-5p 1 1 0
chr19:44819116|44819471 hsa-miR-4723-3p 1 0 0
chr19:44819116|44819471 hsa-miR-6751-3p 1 1 0
chr19:44819116|44819471 hsa-miR-6819-3p 1 0 0
chr19:44819116|44819471 hsa-miR-6823-3p 1 1 0
chr19:44819116|44819471 hsa-miR-7114-3p 1 0 0
chr19:44819116|44819471 hsa-miR-4756-5p 1 0 0
chr19:44819116|44819471 hsa-miR-6783-3p 1 0 0
chr19:44819116|44819471 hsa-miR-10397-5p 0 1 0
chr19:44819116|44819471 hsa-miR-6781-3p 1 0 0
chr19:44819116|44819471 hsa-miR-6824-3p 1 0 0
chr19:44819116|44819471 hsa-miR-574-3p 1 0 0
chr19:44819116|44819471 hsa-miR-412-3p 1 0 0
chr19:44819116|44819471 hsa-miR-125b-5p 1 1 0
chr19:44819116|44819471 hsa-miR-549a-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr19:44819116|44819471
ORF Type ORF1
Protein Length 118
Nucleotide Length 354
Protein Sequence MALVPVGVGGFTGDAIAAQGAGHFQGQRAAHPTLPSGDWLCGLWRLRSGPGWWGQGVGSRAEVNDVQSPRKWKGGCDTWMSERGLRVERKVPYAAPQLAPAEFGVWMAAGRADECDFV
Nucleotide Sequence ATGGCGCTTGTTCCCGTGGGGGTTGGAGGCTTCACAGGAGATGCCATCGCGGCTCAGGGCGCTGGTCACTTTCAGGGTCAGAGAGCTGCTCACCCAACCCTGCCGTCCGGGGATTGGCTCTGCGGGCTATGGAGGCTCCGATCAGGCCCCGGCTGGTGGGGTCAAGGGGTGGGGTCAAGGGCAGAGGTGAACGACGTCCAGTCTCCCAGGAAGTGGAAAGGAGGGTGTGATACTTGGATGAGTGAGAGGGGGCTCAGGGTGGAGAGGAAGGTCCCTTACGCTGCCCCCCAATTGGCTCCAGCTGAGTTTGGGGTCTGGATGGCCGCGGGCAGAGCAGATGAGTGTGACTTCGTC

CircID chr19:44819116|44819471
ORF Type ORF2
Protein Length 60
Nucleotide Length 183
Protein Sequence MFPWGLEASQEMPSRLRALVTFRVRELLTQPCRPGIGSAGYGGSDQAPAGGVKGWGQGQR
Nucleotide Sequence TTGTTCCCGTGGGGGTTGGAGGCTTCACAGGAGATGCCATCGCGGCTCAGGGCGCTGGTCACTTTCAGGGTCAGAGAGCTGCTCACCCAACCCTGCCGTCCGGGGATTGGCTCTGCGGGCTATGGAGGCTCCGATCAGGCCCCGGCTGGTGGGGTCAAGGGGTGGGGTCAAGGGCAGAGGTGA

CircID chr19:44819116|44819471
ORF Type ORF3
Protein Length 25
Nucleotide Length 75
Protein Sequence MPPNWLQLSLGSGWPRAEQMSVTSS
Nucleotide Sequence CTGCCCCCCAATTGGCTCCAGCTGAGTTTGGGGTCTGGATGGCCGCGGGCAGAGCAGATGAGTGTGACTTCGTCT

CircID chr19:44819116|44819471
ORF Type ORF4
Protein Length 38
Nucleotide Length 117
Protein Sequence MALRAMEAPIRPRLVGSRGGVKGRGERRPVSQEVERRV
Nucleotide Sequence TTGGCTCTGCGGGCTATGGAGGCTCCGATCAGGCCCCGGCTGGTGGGGTCAAGGGGTGGGGTCAAGGGCAGAGGTGAACGACGTCCAGTCTCCCAGGAAGTGGAAAGGAGGGTGTGA

CircID chr19:44819116|44819471
ORF Type ORF5
Protein Length 31
Nucleotide Length 96
Protein Sequence MSPLSLIQVSHPPFHFLGDWTSFTSALDPTP
Nucleotide Sequence CTGAGCCCCCTCTCACTCATCCAAGTATCACACCCTCCTTTCCACTTCCTGGGAGACTGGACGTCGTTCACCTCTGCCCTTGACCCCACCCCTTGA

CircID chr19:44819116|44819471
ORF Type ORF6
Protein Length 27
Nucleotide Length 84
Protein Sequence MLCPRPSRPQTQLEPIGGQRKGPSSPP
Nucleotide Sequence CTGCTCTGCCCGCGGCCATCCAGACCCCAAACTCAGCTGGAGCCAATTGGGGGGCAGCGTAAGGGACCTTCCTCTCCACCCTGA

CircID chr19:44819116|44819471
ORF Type ORF7
Protein Length 50
Nucleotide Length 153
Protein Sequence MPLTPPLDPTSRGLIGASIARRANPRTAGLGEQLSDPESDQRPEPRWHLL
Nucleotide Sequence CTGCCCTTGACCCCACCCCTTGACCCCACCAGCCGGGGCCTGATCGGAGCCTCCATAGCCCGCAGAGCCAATCCCCGGACGGCAGGGTTGGGTGAGCAGCTCTCTGACCCTGAAAGTGACCAGCGCCCTGAGCCGCGATGGCATCTCCTGTGA

CircID chr19:44819116|44819471
ORF Type ORF8
Protein Length 38
Nucleotide Length 117
Protein Sequence MGGSVRDLPLHPEPPLTHPSITPSFPLPGRLDVVHLCP
Nucleotide Sequence TTGGGGGGCAGCGTAAGGGACCTTCCTCTCCACCCTGAGCCCCCTCTCACTCATCCAAGTATCACACCCTCCTTTCCACTTCCTGGGAGACTGGACGTCGTTCACCTCTGCCCTTGA

CircID chr19:44819116|44819471
ORF Type ORF9
Protein Length 27
Nucleotide Length 81
Protein Sequence MTLKVTSALSRDGISCEASNPHGNKRH
Nucleotide Sequence CTGACCCTGAAAGTGACCAGCGCCCTGAGCCGCGATGGCATCTCCTGTGAAGCCTCCAACCCCCACGGGAACAAGCGCCAT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites