CircRNA Information

General Information
circRNA Basic Information
CircID chr19:44878347|44878571
Strand +
CircType exon
Host Gene ENSG00000130202.8;
Algorism CIRI2;
Sequence TCCATGTCATCCTCGAGTGCTGGGGGTGGAGGCAACATGAGGCCTTTCTCTGCCTTCTCTTCCTCCTCCTCCTCCTCCTCATCCTTGCCATCTGGTTCCATGGGACCAGGGACTACTGGTGTCCAGAAGACGGGGTCCCCATTTCCCAACACCTGAGCTTTCGGATCGTAGAATCCCCCGTCGCCACTGGCTCCTCCTCCTGCTCCTCCAGGGCTCTTCCTCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:44878347|44878571 hsa-miR-31-5p 0 0 1
chr19:44878347|44878571 hsa-miR-31-3p 0 0 1
chr19:44878347|44878571 hsa-miR-422a 0 0 1
chr19:44878347|44878571 hsa-miR-575 0 1 1
chr19:44878347|44878571 hsa-miR-611 0 0 1
chr19:44878347|44878571 hsa-miR-765 1 1 1
chr19:44878347|44878571 hsa-miR-1299 0 0 1
chr19:44878347|44878571 hsa-miR-1255a 0 0 1
chr19:44878347|44878571 hsa-miR-125a-3p 0 0 1
chr19:44878347|44878571 hsa-miR-361-3p 0 0 1
chr19:44878347|44878571 hsa-miR-199b-3p 0 0 1
chr19:44878347|44878571 hsa-miR-199a-3p 0 0 1
chr19:44878347|44878571 hsa-miR-151-5p 0 0 1
chr19:44878347|44878571 hsa-miR-1233 0 0 1
chr19:44878347|44878571 hsa-miR-1255b 0 0 1
chr19:44878347|44878571 hsa-miR-378 0 0 1
chr19:44878347|44878571 hsa-miR-516b 0 0 1
chr19:44878347|44878571 hsa-miR-1273 0 0 1
chr19:44878347|44878571 hsa-miR-133b 0 1 0
chr19:44878347|44878571 hsa-miR-650 1 0 0
chr19:44878347|44878571 hsa-miR-663a 1 0 0
chr19:44878347|44878571 hsa-miR-760 1 0 0
chr19:44878347|44878571 hsa-miR-940 1 0 0
chr19:44878347|44878571 hsa-miR-1276 1 0 0
chr19:44878347|44878571 hsa-miR-2861 1 0 0
chr19:44878347|44878571 hsa-miR-3132 1 0 0
chr19:44878347|44878571 hsa-miR-3197 1 0 0
chr19:44878347|44878571 hsa-miR-4271 0 1 0
chr19:44878347|44878571 hsa-miR-4281 1 0 0
chr19:44878347|44878571 hsa-miR-3919 0 1 0
chr19:44878347|44878571 hsa-miR-4466 1 0 0
chr19:44878347|44878571 hsa-miR-2392 1 1 0
chr19:44878347|44878571 hsa-miR-4523 1 0 0
chr19:44878347|44878571 hsa-miR-3960 1 0 0
chr19:44878347|44878571 hsa-miR-4656 1 0 0
chr19:44878347|44878571 hsa-miR-4688 1 1 0
chr19:44878347|44878571 hsa-miR-4689 0 1 0
chr19:44878347|44878571 hsa-miR-4739 1 1 0
chr19:44878347|44878571 hsa-miR-5698 1 0 0
chr19:44878347|44878571 hsa-miR-6081 1 0 0
chr19:44878347|44878571 hsa-miR-6085 1 0 0
chr19:44878347|44878571 hsa-miR-6090 1 0 0
chr19:44878347|44878571 hsa-miR-6127 1 0 0
chr19:44878347|44878571 hsa-miR-6165 1 1 0
chr19:44878347|44878571 hsa-miR-7150 1 0 0
chr19:44878347|44878571 hsa-miR-12118 1 0 0
chr19:44878347|44878571 hsa-miR-12128 1 0 0
chr19:44878347|44878571 hsa-miR-127-5p 1 0 0
chr19:44878347|44878571 hsa-miR-4433b-3p 1 0 0
chr19:44878347|44878571 hsa-miR-6734-5p 1 1 0
chr19:44878347|44878571 hsa-miR-6809-5p 1 1 0
chr19:44878347|44878571 hsa-miR-4433a-3p 1 0 0
chr19:44878347|44878571 hsa-miR-6836-3p 0 1 0
chr19:44878347|44878571 hsa-miR-671-5p 1 0 0
chr19:44878347|44878571 hsa-miR-7106-5p 1 1 0
chr19:44878347|44878571 hsa-miR-6894-5p 1 0 0
chr19:44878347|44878571 hsa-miR-6854-5p 1 1 0
chr19:44878347|44878571 hsa-miR-6799-5p 1 0 0
chr19:44878347|44878571 hsa-miR-6510-5p 1 0 0
chr19:44878347|44878571 hsa-miR-766-5p 1 1 0
chr19:44878347|44878571 hsa-miR-3934-5p 0 1 0
chr19:44878347|44878571 hsa-miR-1227-5p 1 0 0
chr19:44878347|44878571 hsa-miR-6807-5p 1 0 0
chr19:44878347|44878571 hsa-miR-6757-5p 1 0 0
chr19:44878347|44878571 hsa-miR-6880-5p 1 1 0
chr19:44878347|44878571 hsa-miR-7847-3p 1 1 0
chr19:44878347|44878571 hsa-miR-4695-5p 1 0 0
chr19:44878347|44878571 hsa-miR-6744-5p 0 1 0
chr19:44878347|44878571 hsa-miR-6746-5p 1 0 0
chr19:44878347|44878571 hsa-miR-4722-5p 1 1 0
chr19:44878347|44878571 hsa-miR-7154-3p 1 0 0
chr19:44878347|44878571 hsa-miR-505-5p 1 1 0
chr19:44878347|44878571 hsa-miR-3928-3p 1 0 0
chr19:44878347|44878571 hsa-miR-6721-5p 1 0 0
chr19:44878347|44878571 hsa-miR-197-5p 1 0 0
chr19:44878347|44878571 hsa-miR-874-3p 1 0 0
chr19:44878347|44878571 hsa-miR-7845-5p 1 0 0
chr19:44878347|44878571 hsa-miR-3180-3p 1 0 0
chr19:44878347|44878571 hsa-miR-6732-5p 1 0 0
chr19:44878347|44878571 hsa-miR-6798-5p 1 0 0
chr19:44878347|44878571 hsa-miR-6770-5p 0 1 0
chr19:44878347|44878571 hsa-miR-3156-5p 1 0 0
chr19:44878347|44878571 hsa-miR-5006-5p 1 0 0
chr19:44878347|44878571 hsa-miR-4640-5p 1 0 0
chr19:44878347|44878571 hsa-miR-6771-5p 1 0 0
chr19:44878347|44878571 hsa-miR-4638-3p 0 1 0
chr19:44878347|44878571 hsa-miR-6717-5p 1 0 0
chr19:44878347|44878571 hsa-miR-4776-5p 1 0 0
chr19:44878347|44878571 hsa-miR-7160-3p 1 0 0
chr19:44878347|44878571 hsa-miR-423-5p 1 0 0
chr19:44878347|44878571 hsa-miR-7152-3p 0 1 0
chr19:44878347|44878571 hsa-miR-2114-5p 0 1 0
chr19:44878347|44878571 hsa-miR-6768-3p 0 1 0
chr19:44878347|44878571 hsa-miR-3152-5p 0 1 0
chr19:44878347|44878571 hsa-miR-133a-3p 0 1 0
chr19:44878347|44878571 hsa-miR-4423-5p 0 1 0
chr19:44878347|44878571 hsa-miR-4716-5p 0 1 0
chr19:44878347|44878571 hsa-miR-744-3p 0 1 0
chr19:44878347|44878571 hsa-miR-10400-5p 1 0 0
chr19:44878347|44878571 hsa-miR-1207-5p 1 0 0
chr19:44878347|44878571 hsa-miR-1233-5p 1 0 0
chr19:44878347|44878571 hsa-miR-4763-3p 1 0 0
chr19:44878347|44878571 hsa-miR-6778-5p 1 0 0
chr19:44878347|44878571 hsa-miR-6865-5p 1 0 0
chr19:44878347|44878571 hsa-miR-6870-5p 1 0 0
chr19:44878347|44878571 hsa-miR-1343-5p 1 0 0
chr19:44878347|44878571 hsa-miR-6743-5p 1 0 0
chr19:44878347|44878571 hsa-miR-6754-5p 1 0 0
chr19:44878347|44878571 hsa-miR-6803-5p 1 0 0
chr19:44878347|44878571 hsa-miR-6815-5p 1 1 0
chr19:44878347|44878571 hsa-miR-6819-5p 1 0 0
chr19:44878347|44878571 hsa-miR-6851-5p 1 0 0
chr19:44878347|44878571 hsa-miR-11181-3p 1 1 0
chr19:44878347|44878571 hsa-miR-1249-5p 1 0 0
chr19:44878347|44878571 hsa-miR-6722-3p 1 0 0
chr19:44878347|44878571 hsa-miR-6797-5p 1 1 0
chr19:44878347|44878571 hsa-miR-6808-5p 1 0 0
chr19:44878347|44878571 hsa-miR-6879-5p 1 0 0
chr19:44878347|44878571 hsa-miR-7111-5p 1 1 0
chr19:44878347|44878571 hsa-miR-6780b-5p 1 1 0
chr19:44878347|44878571 hsa-miR-6836-5p 1 0 0
chr19:44878347|44878571 hsa-miR-10396b-5p 1 0 0
chr19:44878347|44878571 hsa-miR-1237-5p 1 0 0
chr19:44878347|44878571 hsa-miR-4649-5p 1 0 0
chr19:44878347|44878571 hsa-miR-4725-3p 1 0 0
chr19:44878347|44878571 hsa-miR-6729-5p 1 0 0
chr19:44878347|44878571 hsa-miR-6794-5p 1 0 0
chr19:44878347|44878571 hsa-miR-6858-5p 1 1 0
chr19:44878347|44878571 hsa-miR-6889-5p 1 0 0
chr19:44878347|44878571 hsa-miR-4723-5p 1 1 0
chr19:44878347|44878571 hsa-miR-6831-5p 1 0 0
chr19:44878347|44878571 hsa-miR-939-5p 1 1 0
chr19:44878347|44878571 hsa-miR-6511a-5p 0 1 0
chr19:44878347|44878571 hsa-miR-6731-5p 1 0 0
chr19:44878347|44878571 hsa-miR-4665-5p 1 0 0
chr19:44878347|44878571 hsa-miR-3173-3p 1 0 0
chr19:44878347|44878571 hsa-miR-6891-5p 0 1 0
chr19:44878347|44878571 hsa-miR-4716-3p 1 1 0
chr19:44878347|44878571 hsa-miR-4667-5p 0 1 0
chr19:44878347|44878571 hsa-miR-3184-5p 1 0 0
chr19:44878347|44878571 hsa-miR-6791-5p 1 0 0
chr19:44878347|44878571 hsa-miR-4676-5p 0 1 0
chr19:44878347|44878571 hsa-miR-99b-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr19:44878347|44878571
ORF Type ORF1
Protein Length 50
Nucleotide Length 153
Protein Sequence MSSSSAGGGGNMRPFSAFSSSSSSSSSLPSGSMGPGTTGVQKTGSPFPNT
Nucleotide Sequence ATGTCATCCTCGAGTGCTGGGGGTGGAGGCAACATGAGGCCTTTCTCTGCCTTCTCTTCCTCCTCCTCCTCCTCCTCATCCTTGCCATCTGGTTCCATGGGACCAGGGACTACTGGTGTCCAGAAGACGGGGTCCCCATTTCCCAACACCTGA

CircID chr19:44878347|44878571
ORF Type ORF2
Protein Length 58
Nucleotide Length 174
Protein Sequence MPSLPPPPPPHPCHLVPWDQGLLVSRRRGPHFPTPELSDRRIPRRHWLLLLLLQGSSS
Nucleotide Sequence CTGCCTTCTCTTCCTCCTCCTCCTCCTCCTCATCCTTGCCATCTGGTTCCATGGGACCAGGGACTACTGGTGTCCAGAAGACGGGGTCCCCATTTCCCAACACCTGAGCTTTCGGATCGTAGAATCCCCCGTCGCCACTGGCTCCTCCTCCTGCTCCTCCAGGGCTCTTCCTCC

CircID chr19:44878347|44878571
ORF Type ORF3
Protein Length 49
Nucleotide Length 147
Protein Sequence MGNGDPVFWTPVVPGPMEPDGKDEEEEEEEEKAEKGLMLPPPPALEDDM
Nucleotide Sequence TTGGGAAATGGGGACCCCGTCTTCTGGACACCAGTAGTCCCTGGTCCCATGGAACCAGATGGCAAGGATGAGGAGGAGGAGGAGGAGGAAGAGAAGGCAGAGAAAGGCCTCATGTTGCCTCCACCCCCAGCACTCGAGGATGACATG

CircID chr19:44878347|44878571
ORF Type ORF4
Protein Length 32
Nucleotide Length 99
Protein Sequence MEEQEEEPVATGDSTIRKLRCWEMGTPSSGHQ
Nucleotide Sequence CTGGAGGAGCAGGAGGAGGAGCCAGTGGCGACGGGGGATTCTACGATCCGAAAGCTCAGGTGTTGGGAAATGGGGACCCCGTCTTCTGGACACCAGTAG

CircID chr19:44878347|44878571
ORF Type ORF5
Protein Length 36
Nucleotide Length 108
Protein Sequence MVPWNQMARMRRRRRRKRRQRKASCCLHPQHSRMTW
Nucleotide Sequence CTGGTCCCATGGAACCAGATGGCAAGGATGAGGAGGAGGAGGAGGAGGAAGAGAAGGCAGAGAAAGGCCTCATGTTGCCTCCACCCCCAGCACTCGAGGATGACATGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites