CircRNA Information

General Information
circRNA Basic Information
CircID chr19:44882345|44886219
Strand +
CircType exon
Host Gene ENSG00000130202.8;
Algorism CIRI2;
Sequence CTGCTCAGTGCATGAGGCGCCAGCATCAAAGTAGGGGGTCTTGAGTGGGCTGTGCTCCGAGGCCCCCAGAGTGAAGAGCTGGGAGGGCTGTAGTGGGAGAGGGGCGGGGAGGTCAGGAACTGCCCCCACCACCCAGCCAGCTTCTCCCTGCCAGGCCCCTCCCAGCCCTGGGGTGGGTGTGGAGGTGGGGATAGCTTGGGCTCCAGGGAAAGTGCTCACCATCTCCTGTGCCTCCAGCTTCGCTTTTGGGGTCGGTGGCTTGTAGGAGGGAGGTCCCTCCAGGTCTTCGTCCTCCTCTGCCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:44882345|44886219 hsa-miR-150-5p 0 0 1
chr19:44882345|44886219 hsa-miR-150-3p 0 0 1
chr19:44882345|44886219 hsa-miR-326 0 1 1
chr19:44882345|44886219 hsa-miR-412-5p 0 0 1
chr19:44882345|44886219 hsa-miR-412-3p 0 0 1
chr19:44882345|44886219 hsa-miR-619-5p 0 0 1
chr19:44882345|44886219 hsa-miR-619-3p 0 0 1
chr19:44882345|44886219 hsa-miR-631 0 1 1
chr19:44882345|44886219 hsa-miR-637 0 1 1
chr19:44882345|44886219 hsa-miR-650 0 0 1
chr19:44882345|44886219 hsa-miR-541-5p 0 0 1
chr19:44882345|44886219 hsa-miR-541-3p 0 0 1
chr19:44882345|44886219 hsa-miR-1200 0 0 1
chr19:44882345|44886219 hsa-miR-1293 0 1 1
chr19:44882345|44886219 hsa-miR-486-3p 0 1 1
chr19:44882345|44886219 hsa-miR-532-3p 0 0 1
chr19:44882345|44886219 hsa-miR-423-5p 0 1 1
chr19:44882345|44886219 hsa-miR-654-5p 0 0 1
chr19:44882345|44886219 hsa-miR-566 0 0 1
chr19:44882345|44886219 hsa-miR-1224-3p 0 1 1
chr19:44882345|44886219 hsa-miR-1207-5p 1 1 1
chr19:44882345|44886219 hsa-miR-330-5p 0 0 1
chr19:44882345|44886219 hsa-miR-1274a 0 0 1
chr19:44882345|44886219 hsa-miR-608 1 1 0
chr19:44882345|44886219 hsa-miR-762 1 1 0
chr19:44882345|44886219 hsa-miR-1913 0 1 0
chr19:44882345|44886219 hsa-miR-2861 0 1 0
chr19:44882345|44886219 hsa-miR-3131 0 1 0
chr19:44882345|44886219 hsa-miR-3132 1 1 0
chr19:44882345|44886219 hsa-miR-3197 1 0 0
chr19:44882345|44886219 hsa-miR-4301 0 1 0
chr19:44882345|44886219 hsa-miR-4254 0 1 0
chr19:44882345|44886219 hsa-miR-4290 0 1 0
chr19:44882345|44886219 hsa-miR-3612 0 1 0
chr19:44882345|44886219 hsa-miR-4441 0 1 0
chr19:44882345|44886219 hsa-miR-4443 0 1 0
chr19:44882345|44886219 hsa-miR-4447 0 1 0
chr19:44882345|44886219 hsa-miR-3135b 0 1 0
chr19:44882345|44886219 hsa-miR-4469 0 1 0
chr19:44882345|44886219 hsa-miR-4498 0 1 0
chr19:44882345|44886219 hsa-miR-4505 0 1 0
chr19:44882345|44886219 hsa-miR-4516 0 1 0
chr19:44882345|44886219 hsa-miR-4656 1 0 0
chr19:44882345|44886219 hsa-miR-4739 1 1 0
chr19:44882345|44886219 hsa-miR-4741 1 0 0
chr19:44882345|44886219 hsa-miR-5193 0 1 0
chr19:44882345|44886219 hsa-miR-5194 0 1 0
chr19:44882345|44886219 hsa-miR-5685 0 1 0
chr19:44882345|44886219 hsa-miR-5787 0 1 0
chr19:44882345|44886219 hsa-miR-6081 1 0 0
chr19:44882345|44886219 hsa-miR-6085 1 0 0
chr19:44882345|44886219 hsa-miR-7150 0 1 0
chr19:44882345|44886219 hsa-miR-8073 0 1 0
chr19:44882345|44886219 hsa-miR-4731-5p 1 1 0
chr19:44882345|44886219 hsa-miR-7106-5p 1 0 0
chr19:44882345|44886219 hsa-miR-6894-5p 1 1 0
chr19:44882345|44886219 hsa-miR-6892-3p 0 1 0
chr19:44882345|44886219 hsa-miR-3622a-5p 1 1 0
chr19:44882345|44886219 hsa-miR-3192-5p 0 1 0
chr19:44882345|44886219 hsa-miR-7847-3p 1 1 0
chr19:44882345|44886219 hsa-miR-3064-5p 0 1 0
chr19:44882345|44886219 hsa-miR-7154-3p 0 1 0
chr19:44882345|44886219 hsa-miR-197-5p 1 0 0
chr19:44882345|44886219 hsa-miR-6776-5p 0 1 0
chr19:44882345|44886219 hsa-miR-7110-3p 0 1 0
chr19:44882345|44886219 hsa-miR-6760-5p 0 1 0
chr19:44882345|44886219 hsa-miR-2467-3p 0 1 0
chr19:44882345|44886219 hsa-miR-7855-5p 0 1 0
chr19:44882345|44886219 hsa-miR-4713-5p 0 1 0
chr19:44882345|44886219 hsa-miR-7108-3p 0 1 0
chr19:44882345|44886219 hsa-miR-7161-3p 0 1 0
chr19:44882345|44886219 hsa-miR-7113-3p 0 1 0
chr19:44882345|44886219 hsa-miR-296-3p 0 1 0
chr19:44882345|44886219 hsa-miR-6823-5p 0 1 0
chr19:44882345|44886219 hsa-miR-6847-5p 0 1 0
chr19:44882345|44886219 hsa-miR-6821-3p 0 1 0
chr19:44882345|44886219 hsa-miR-6861-3p 0 1 0
chr19:44882345|44886219 hsa-miR-4446-3p 0 1 0
chr19:44882345|44886219 hsa-miR-378a-5p 0 1 0
chr19:44882345|44886219 hsa-miR-3162-5p 0 1 0
chr19:44882345|44886219 hsa-miR-4640-3p 0 1 0
chr19:44882345|44886219 hsa-miR-1306-5p 0 1 0
chr19:44882345|44886219 hsa-miR-7846-3p 1 0 0
chr19:44882345|44886219 hsa-miR-4707-5p 1 0 0
chr19:44882345|44886219 hsa-miR-584-3p 0 1 0
chr19:44882345|44886219 hsa-miR-3180-5p 1 0 0
chr19:44882345|44886219 hsa-miR-4758-3p 0 1 0
chr19:44882345|44886219 hsa-miR-6778-3p 0 1 0
chr19:44882345|44886219 hsa-miR-6856-3p 0 1 0
chr19:44882345|44886219 hsa-miR-6886-3p 0 1 0
chr19:44882345|44886219 hsa-miR-4749-3p 0 1 0
chr19:44882345|44886219 hsa-miR-668-5p 0 1 0
chr19:44882345|44886219 hsa-miR-3670 0 1 0
chr19:44882345|44886219 hsa-miR-5584-3p 0 1 0
chr19:44882345|44886219 hsa-miR-4750-3p 1 0 0
chr19:44882345|44886219 hsa-miR-6734-3p 0 1 0
chr19:44882345|44886219 hsa-miR-1249-3p 0 1 0
chr19:44882345|44886219 hsa-miR-3156-3p 0 1 0
chr19:44882345|44886219 hsa-miR-4763-3p 1 1 0
chr19:44882345|44886219 hsa-miR-6778-5p 1 0 0
chr19:44882345|44886219 hsa-miR-6787-5p 1 1 0
chr19:44882345|44886219 hsa-miR-6775-5p 0 1 0
chr19:44882345|44886219 hsa-miR-6743-5p 1 0 0
chr19:44882345|44886219 hsa-miR-6754-5p 0 1 0
chr19:44882345|44886219 hsa-miR-6851-5p 1 0 0
chr19:44882345|44886219 hsa-miR-6779-5p 0 1 0
chr19:44882345|44886219 hsa-miR-6808-5p 1 0 0
chr19:44882345|44886219 hsa-miR-7111-5p 1 0 0
chr19:44882345|44886219 hsa-miR-1915-3p 0 1 0
chr19:44882345|44886219 hsa-miR-3620-5p 1 1 0
chr19:44882345|44886219 hsa-miR-4728-5p 0 1 0
chr19:44882345|44886219 hsa-miR-328-5p 1 0 0
chr19:44882345|44886219 hsa-miR-4685-5p 1 1 0
chr19:44882345|44886219 hsa-miR-6735-5p 0 1 0
chr19:44882345|44886219 hsa-miR-6795-5p 1 0 0
chr19:44882345|44886219 hsa-miR-6848-5p 1 0 0
chr19:44882345|44886219 hsa-miR-6858-5p 1 0 0
chr19:44882345|44886219 hsa-miR-6883-5p 0 1 0
chr19:44882345|44886219 hsa-miR-6887-5p 1 0 0
chr19:44882345|44886219 hsa-miR-6831-5p 1 0 0
chr19:44882345|44886219 hsa-miR-939-5p 1 0 0
chr19:44882345|44886219 hsa-miR-324-3p 1 0 0
chr19:44882345|44886219 hsa-miR-4472 0 1 0
chr19:44882345|44886219 hsa-miR-4716-3p 0 1 0
chr19:44882345|44886219 hsa-miR-6766-5p 0 1 0
chr19:44882345|44886219 hsa-miR-3184-5p 0 1 0
chr19:44882345|44886219 hsa-miR-6837-5p 0 1 0
chr19:44882345|44886219 hsa-miR-6764-5p 0 1 0
chr19:44882345|44886219 hsa-miR-4690-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr19:44882345|44886219
ORF Type ORF1
Protein Length 52
Nucleotide Length 156
Protein Sequence MPGPSQPWGGCGGGDSLGSRESAHHLLCLQLRFWGRWLVGGRSLQVFVLLCP
Nucleotide Sequence CTGCCAGGCCCCTCCCAGCCCTGGGGTGGGTGTGGAGGTGGGGATAGCTTGGGCTCCAGGGAAAGTGCTCACCATCTCCTGTGCCTCCAGCTTCGCTTTTGGGGTCGGTGGCTTGTAGGAGGGAGGTCCCTCCAGGTCTTCGTCCTCCTCTGCCCC

CircID chr19:44882345|44886219
ORF Type ORF2
Protein Length 74
Nucleotide Length 225
Protein Sequence MSGLCSEAPRVKSWEGCSGRGAGRSGTAPTTQPASPCQAPPSPGVGVEVGIAWAPGKVLTISCASSFAFGVGGL
Nucleotide Sequence TTGAGTGGGCTGTGCTCCGAGGCCCCCAGAGTGAAGAGCTGGGAGGGCTGTAGTGGGAGAGGGGCGGGGAGGTCAGGAACTGCCCCCACCACCCAGCCAGCTTCTCCCTGCCAGGCCCCTCCCAGCCCTGGGGTGGGTGTGGAGGTGGGGATAGCTTGGGCTCCAGGGAAAGTGCTCACCATCTCCTGTGCCTCCAGCTTCGCTTTTGGGGTCGGTGGCTTGTAG

CircID chr19:44882345|44886219
ORF Type ORF3
Protein Length 94
Nucleotide Length 282
Protein Sequence MEGPPSYKPPTPKAKLEAQEMVSTFPGAQAIPTSTPTPGLGGAWQGEAGWVVGAVPDLPAPLPLQPSQLFTLGASEHSPLKTPYFDAGASCTEQ
Nucleotide Sequence CTGGAGGGACCTCCCTCCTACAAGCCACCGACCCCAAAAGCGAAGCTGGAGGCACAGGAGATGGTGAGCACTTTCCCTGGAGCCCAAGCTATCCCCACCTCCACACCCACCCCAGGGCTGGGAGGGGCCTGGCAGGGAGAAGCTGGCTGGGTGGTGGGGGCAGTTCCTGACCTCCCCGCCCCTCTCCCACTACAGCCCTCCCAGCTCTTCACTCTGGGGGCCTCGGAGCACAGCCCACTCAAGACCCCCTACTTTGATGCTGGCGCCTCATGCACTGAGCAG

CircID chr19:44882345|44886219
ORF Type ORF4
Protein Length 68
Nucleotide Length 204
Protein Sequence MEPKLSPPPHPPQGWEGPGREKLAGWWGQFLTSPPLSHYSPPSSSLWGPRSTAHSRPPTLMLAPHALS
Nucleotide Sequence CTGGAGCCCAAGCTATCCCCACCTCCACACCCACCCCAGGGCTGGGAGGGGCCTGGCAGGGAGAAGCTGGCTGGGTGGTGGGGGCAGTTCCTGACCTCCCCGCCCCTCTCCCACTACAGCCCTCCCAGCTCTTCACTCTGGGGGCCTCGGAGCACAGCCCACTCAAGACCCCCTACTTTGATGCTGGCGCCTCATGCACTGAGC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites