CircRNA Information

General Information
circRNA Basic Information
CircID chr19:44992761|44992838
Strand -
CircType exon
Host Gene ENSG00000104853.14;
Algorism CIRI2;
Sequence CTGCACCCACCACGACCACCGCCACCAGGGAGGAGGCCTCCACGTCCCTGCCCACCAAGCCCACCCAGGGGGCCAGCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:44992761|44992838 hsa-miR-650 0 0 1
chr19:44992761|44992838 hsa-miR-541-5p 0 0 1
chr19:44992761|44992838 hsa-miR-541-3p 0 0 1
chr19:44992761|44992838 hsa-miR-1293 0 0 1
chr19:44992761|44992838 hsa-miR-654-5p 1 1 1
chr19:44992761|44992838 hsa-miR-331-3p 0 0 1
chr19:44992761|44992838 hsa-miR-1207-5p 0 1 1
chr19:44992761|44992838 hsa-miR-323-5p 0 0 1
chr19:44992761|44992838 hsa-miR-608 1 0 0
chr19:44992761|44992838 hsa-miR-612 1 0 0
chr19:44992761|44992838 hsa-miR-762 1 0 0
chr19:44992761|44992838 hsa-miR-892b 1 0 0
chr19:44992761|44992838 hsa-miR-933 1 0 0
chr19:44992761|44992838 hsa-miR-1268a 1 0 0
chr19:44992761|44992838 hsa-miR-2861 1 0 0
chr19:44992761|44992838 hsa-miR-3141 1 0 0
chr19:44992761|44992838 hsa-miR-4313 0 1 0
chr19:44992761|44992838 hsa-miR-4322 1 0 0
chr19:44992761|44992838 hsa-miR-4265 1 0 0
chr19:44992761|44992838 hsa-miR-4292 0 1 0
chr19:44992761|44992838 hsa-miR-1268b 1 0 0
chr19:44992761|44992838 hsa-miR-4440 0 1 0
chr19:44992761|44992838 hsa-miR-4467 1 0 0
chr19:44992761|44992838 hsa-miR-4481 1 0 0
chr19:44992761|44992838 hsa-miR-4505 1 0 0
chr19:44992761|44992838 hsa-miR-4507 1 0 0
chr19:44992761|44992838 hsa-miR-1587 1 0 0
chr19:44992761|44992838 hsa-miR-4651 1 0 0
chr19:44992761|44992838 hsa-miR-4721 1 0 0
chr19:44992761|44992838 hsa-miR-6134 1 0 0
chr19:44992761|44992838 hsa-miR-6860 1 1 0
chr19:44992761|44992838 hsa-miR-370-3p 1 0 0
chr19:44992761|44992838 hsa-miR-323a-5p 0 1 0
chr19:44992761|44992838 hsa-miR-149-5p 1 0 0
chr19:44992761|44992838 hsa-miR-6861-5p 1 0 0
chr19:44992761|44992838 hsa-miR-8071 1 0 0
chr19:44992761|44992838 hsa-miR-6089 1 0 0
chr19:44992761|44992838 hsa-miR-6757-5p 1 1 0
chr19:44992761|44992838 hsa-miR-6880-5p 1 0 0
chr19:44992761|44992838 hsa-miR-6741-5p 1 0 0
chr19:44992761|44992838 hsa-miR-6721-5p 1 1 0
chr19:44992761|44992838 hsa-miR-6776-5p 1 0 0
chr19:44992761|44992838 hsa-miR-7845-5p 1 0 0
chr19:44992761|44992838 hsa-miR-6748-5p 1 0 0
chr19:44992761|44992838 hsa-miR-6793-5p 1 0 0
chr19:44992761|44992838 hsa-miR-1229-5p 1 0 0
chr19:44992761|44992838 hsa-miR-1908-5p 1 0 0
chr19:44992761|44992838 hsa-miR-1228-5p 1 0 0
chr19:44992761|44992838 hsa-miR-7112-5p 1 0 0
chr19:44992761|44992838 hsa-miR-7152-3p 1 0 0
chr19:44992761|44992838 hsa-miR-4746-3p 1 0 0
chr19:44992761|44992838 hsa-miR-10400-5p 1 0 0
chr19:44992761|44992838 hsa-miR-4763-3p 1 1 0
chr19:44992761|44992838 hsa-miR-6769b-5p 1 1 0
chr19:44992761|44992838 hsa-miR-6787-5p 1 0 0
chr19:44992761|44992838 hsa-miR-6816-5p 1 0 0
chr19:44992761|44992838 hsa-miR-6737-5p 1 0 0
chr19:44992761|44992838 hsa-miR-6756-5p 1 1 0
chr19:44992761|44992838 hsa-miR-6769a-5p 1 0 0
chr19:44992761|44992838 hsa-miR-6803-5p 1 0 0
chr19:44992761|44992838 hsa-miR-6842-5p 1 0 0
chr19:44992761|44992838 hsa-miR-6851-5p 1 0 0
chr19:44992761|44992838 hsa-miR-6751-5p 1 0 0
chr19:44992761|44992838 hsa-miR-6779-5p 1 0 0
chr19:44992761|44992838 hsa-miR-6808-5p 1 1 0
chr19:44992761|44992838 hsa-miR-6879-5p 1 0 0
chr19:44992761|44992838 hsa-miR-3620-5p 1 0 0
chr19:44992761|44992838 hsa-miR-1237-5p 1 0 0
chr19:44992761|44992838 hsa-miR-328-5p 1 0 0
chr19:44992761|44992838 hsa-miR-4701-3p 1 0 0
chr19:44992761|44992838 hsa-miR-4758-5p 1 0 0
chr19:44992761|44992838 hsa-miR-3940-5p 1 0 0
chr19:44992761|44992838 hsa-miR-6766-5p 1 0 0
chr19:44992761|44992838 hsa-miR-6785-5p 1 0 0
chr19:44992761|44992838 hsa-miR-6791-5p 1 1 0
chr19:44992761|44992838 hsa-miR-6829-3p 0 1 0
chr19:44992761|44992838 hsa-miR-10400-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr19:44992761|44992838
ORF Type ORF1
Protein Length 26
Nucleotide Length 78
Protein Sequence LHPPRPPPPGRRPPRPCPPSPPRGPA
Nucleotide Sequence CTGCACCCACCACGACCACCGCCACCAGGGAGGAGGCCTCCACGTCCCTGCCCACCAAGCCCACCCAGGGGGCCAGCT
CircID chr19:44992761|44992838
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence LAPWVGLVGRDVEASSLVAVVVVGA
Nucleotide Sequence CTGGCCCCCTGGGTGGGCTTGGTGGGCAGGGACGTGGAGGCCTCCTCCCTGGTGGCGGTGGTCGTGGTGGGTGCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab