CircNet

General Information

circRNA Basic Information

CircID	chr19:45056450\|45062195
Strand	+
CircType	exon
Host Gene	ENSG00000104859.14;
Algorism	CIRI2;DCC;
Sequence	TCTCAGAGGAGCAGTGCCTGTACCAGATCTACATTGATGAGTTGTACGGAGGCCTCCAGAGACCCAGCGAAGATGAGAAGAAGAAGATGCTCCGGAAAGACAAGGAGGAGGCAGAGGCCATCAAGCATGCCAAGGCTCTTGAGGAGGAGAAGGCCATGTACTCGGGACGCCGCTCTCGACGCCAGCGGAGAGAGTTTCGGGAGAAGCGGCTGAGGGGTCGCAAGATCAGCCCACCCAGCTATGCCCGCCGAGACAGCCCCACCTATGACCCCTATAAGCG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	miRanda	targetScan
chr19:45056450\|45062195	hsa-miR-150-3p	1	1
chr19:45056450\|45062195	hsa-miR-92a-2-5p	1	1
chr19:45056450\|45062195	hsa-miR-212-5p	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:45056450\|45062195
ORF Type	ORF1
Protein Length	64
Nucleotide Length	192
Protein Sequence	MLRKDKEEAEAIKHAKALEEEKAMYSGRRSRRQRREFREKRLRGRKISPPSYARRDSPTYDPYK
Nucleotide Sequence	ATGCTCCGGAAAGACAAGGAGGAGGCAGAGGCCATCAAGCATGCCAAGGCTCTTGAGGAGGAGAAGGCCATGTACTCGGGACGCCGCTCTCGACGCCAGCGGAGAGAGTTTCGGGAGAAGCGGCTGAGGGGTCGCAAGATCAGCCCACCCAGCTATGCCCGCCGAGACAGCCCCACCTATGACCCCTATAAG

CircID	chr19:45056450\|45062195
ORF Type	ORF2
Protein Length	59
Nucleotide Length	177
Protein Sequence	MSCTEASRDPAKMRRRRCSGKTRRRQRPSSMPRLLRRRRPCTRDAALDASGESFGRSG*
Nucleotide Sequence	ATGAGTTGTACGGAGGCCTCCAGAGACCCAGCGAAGATGAGAAGAAGAAGATGCTCCGGAAAGACAAGGAGGAGGCAGAGGCCATCAAGCATGCCAAGGCTCTTGAGGAGGAGAAGGCCATGTACTCGGGACGCCGCTCTCGACGCCAGCGGAGAGAGTTTCGGGAGAAGCGGCTGA

CircID	chr19:45056450\|45062195
ORF Type	ORF3
Protein Length	43
Nucleotide Length	129
Protein Sequence	MAFSSSRALACLMASASSLSFRSIFFFSSSLGLWRPPYNSSM*
Nucleotide Sequence	ATGGCCTTCTCCTCCTCAAGAGCCTTGGCATGCTTGATGGCCTCTGCCTCCTCCTTGTCTTTCCGGAGCATCTTCTTCTTCTCATCTTCGCTGGGTCTCTGGAGGCCTCCGTACAACTCATCAATGTAG

CircID	chr19:45056450\|45062195
ORF Type	ORF4
Protein Length	92
Nucleotide Length	276
Protein Sequence	LIGVIGGAVSAGIAGWADLATPQPLLPKLSPLASRAASRVHGLLLLKSLGMLDGLCLLLVFPEHLLLLIFAGSLEASVQLINVDLVQALLL*
Nucleotide Sequence	CTTATAGGGGTCATAGGTGGGGCTGTCTCGGCGGGCATAGCTGGGTGGGCTGATCTTGCGACCCCTCAGCCGCTTCTCCCGAAACTCTCTCCGCTGGCGTCGAGAGCGGCGTCCCGAGTACATGGCCTTCTCCTCCTCAAGAGCCTTGGCATGCTTGATGGCCTCTGCCTCCTCCTTGTCTTTCCGGAGCATCTTCTTCTTCTCATCTTCGCTGGGTCTCTGGAGGCCTCCGTACAACTCATCAATGTAGATCTGGTACAGGCACTGCTCCTCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr19:45056450\|45062195	NOP56	1	1	0
chr19:45056450\|45062195	ELAVL1	1	6	1
chr19:45056450\|45062195	SF3B4	1	0	0
chr19:45056450\|45062195	SF3B1	1	0	0
chr19:45056450\|45062195	FMR1	1	0	0
chr19:45056450\|45062195	CSTF2	2	0	0
chr19:45056450\|45062195	FUS	1	0	0
chr19:45056450\|45062195	SRSF7	1	0	0
chr19:45056450\|45062195	CPSF4	0	1	0
chr19:45056450\|45062195	SRSF1	2	0	6
chr19:45056450\|45062195	NOP58	2	1	3
chr19:45056450\|45062195	ADAR	1	0	0
chr19:45056450\|45062195	U2AF2	3	3	0
chr19:45056450\|45062195	SRSF9	2	0	3
chr19:45056450\|45062195	DDX54	0	0	3
chr19:45056450\|45062195	RBM10	2	0	0
chr19:45056450\|45062195	PTBP1	1	0	0
chr19:45056450\|45062195	HNRNPC	0	3	0
chr19:45056450\|45062195	TRA2A	3	0	7
chr19:45056450\|45062195	ZNF184	0	0	1
chr19:45056450\|45062195	SMNDC1	2	0	1
chr19:45056450\|45062195	MSI2	0	0	1
chr19:45056450\|45062195	ACIN1	2	0	3
chr19:45056450\|45062195	LIN28B	3	0	3
chr19:45056450\|45062195	BCCIP	0	0	2
chr19:45056450\|45062195	IGF2BP3	0	0	2
chr19:45056450\|45062195	IGF2BP2	1	1	5
chr19:45056450\|45062195	STAU1	1	0	0
chr19:45056450\|45062195	BUD13	2	0	1
chr19:45056450\|45062195	RBFOX2	1	1	0
chr19:45056450\|45062195	EIF4G2	0	0	1
chr19:45056450\|45062195	CSTF2T	0	0	1
chr19:45056450\|45062195	VIM	0	0	1
chr19:45056450\|45062195	EWSR1	1	0	0
chr19:45056450\|45062195	EIF4A3	6	2	4
chr19:45056450\|45062195	FBL	0	2	3

CircRNA Information