CircRNA Information

General Information
circRNA Basic Information
CircID chr19:45263113|45263367
Strand +
CircType exon
Host Gene ENSG00000007047.14;
Algorism find_circ;CIRI2;DCC;
Sequence GTTGCCATCAAGATTATCGACAAAACCCAGCTGAATCCCAGCAGCCTGCAGAAGGTGAGGCTGGGGAGACGGGGGAGAGCAGGAGCCAGGCTTCCGGCACAGCCGGGTGACCCACCTGACCCTTCCTGCGGGGGCCCGGCTGGGGAAAGGATCCCCCAAGCCACCCACCCTCACTCTCCTCTGTCTTCCTTTCTGGCCACGCCCAGCTGTTCCGAGAAGTCCGCATCATGAAGGGCCTAAACCACCCCAACATCG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:45263113|45263367 hsa-miR-504-5p 0 0 1
chr19:45263113|45263367 hsa-miR-504-3p 0 0 1
chr19:45263113|45263367 hsa-miR-588 0 0 1
chr19:45263113|45263367 hsa-miR-596 0 0 1
chr19:45263113|45263367 hsa-miR-298 0 1 1
chr19:45263113|45263367 hsa-miR-744-5p 0 0 1
chr19:45263113|45263367 hsa-miR-744-3p 0 0 1
chr19:45263113|45263367 hsa-miR-939-5p 0 0 1
chr19:45263113|45263367 hsa-miR-939-3p 0 0 1
chr19:45263113|45263367 hsa-miR-1180-5p 0 0 1
chr19:45263113|45263367 hsa-miR-1180-3p 0 0 1
chr19:45263113|45263367 hsa-miR-149-5p 0 1 1
chr19:45263113|45263367 hsa-miR-485-5p 0 1 1
chr19:45263113|45263367 hsa-miR-361-3p 0 0 1
chr19:45263113|45263367 hsa-miR-1224-3p 1 1 1
chr19:45263113|45263367 hsa-miR-483-5p 0 1 1
chr19:45263113|45263367 hsa-miR-551a 1 0 0
chr19:45263113|45263367 hsa-miR-622 0 1 0
chr19:45263113|45263367 hsa-miR-663a 1 0 0
chr19:45263113|45263367 hsa-miR-762 1 0 0
chr19:45263113|45263367 hsa-miR-2110 0 1 0
chr19:45263113|45263367 hsa-miR-3175 0 1 0
chr19:45263113|45263367 hsa-miR-4326 1 0 0
chr19:45263113|45263367 hsa-miR-4505 1 1 0
chr19:45263113|45263367 hsa-miR-4651 1 0 0
chr19:45263113|45263367 hsa-miR-4734 0 1 0
chr19:45263113|45263367 hsa-miR-5698 0 1 0
chr19:45263113|45263367 hsa-miR-5787 1 1 0
chr19:45263113|45263367 hsa-miR-6081 1 0 0
chr19:45263113|45263367 hsa-miR-6085 1 0 0
chr19:45263113|45263367 hsa-miR-6165 1 0 0
chr19:45263113|45263367 hsa-miR-8085 0 1 0
chr19:45263113|45263367 hsa-miR-8089 1 1 0
chr19:45263113|45263367 hsa-miR-4731-5p 0 1 0
chr19:45263113|45263367 hsa-miR-6879-3p 1 0 0
chr19:45263113|45263367 hsa-miR-6765-5p 1 0 0
chr19:45263113|45263367 hsa-miR-3150a-3p 0 1 0
chr19:45263113|45263367 hsa-miR-6825-5p 1 1 0
chr19:45263113|45263367 hsa-miR-125a-3p 1 0 0
chr19:45263113|45263367 hsa-miR-139-3p 0 1 0
chr19:45263113|45263367 hsa-miR-6089 1 0 0
chr19:45263113|45263367 hsa-miR-4722-5p 1 0 0
chr19:45263113|45263367 hsa-miR-505-5p 0 1 0
chr19:45263113|45263367 hsa-miR-6890-5p 1 0 0
chr19:45263113|45263367 hsa-miR-4655-5p 1 0 0
chr19:45263113|45263367 hsa-miR-3189-5p 1 0 0
chr19:45263113|45263367 hsa-miR-6873-3p 0 1 0
chr19:45263113|45263367 hsa-miR-6845-3p 0 1 0
chr19:45263113|45263367 hsa-miR-1292-5p 1 0 0
chr19:45263113|45263367 hsa-miR-3180-3p 1 0 0
chr19:45263113|45263367 hsa-miR-942-5p 1 0 0
chr19:45263113|45263367 hsa-miR-6786-5p 1 0 0
chr19:45263113|45263367 hsa-miR-1226-5p 1 0 0
chr19:45263113|45263367 hsa-miR-7108-3p 1 0 0
chr19:45263113|45263367 hsa-miR-6803-3p 1 0 0
chr19:45263113|45263367 hsa-miR-3667-3p 1 0 0
chr19:45263113|45263367 hsa-miR-4783-5p 1 0 0
chr19:45263113|45263367 hsa-miR-4743-3p 0 1 0
chr19:45263113|45263367 hsa-miR-6780a-3p 1 1 0
chr19:45263113|45263367 hsa-miR-4787-5p 1 0 0
chr19:45263113|45263367 hsa-miR-4638-3p 1 0 0
chr19:45263113|45263367 hsa-miR-5196-3p 1 0 0
chr19:45263113|45263367 hsa-miR-149-3p 1 0 0
chr19:45263113|45263367 hsa-miR-6824-5p 1 0 0
chr19:45263113|45263367 hsa-miR-7154-5p 0 1 0
chr19:45263113|45263367 hsa-miR-3158-5p 0 1 0
chr19:45263113|45263367 hsa-miR-4661-3p 0 1 0
chr19:45263113|45263367 hsa-miR-4632-3p 1 0 0
chr19:45263113|45263367 hsa-miR-6746-3p 1 0 0
chr19:45263113|45263367 hsa-miR-6758-3p 1 1 0
chr19:45263113|45263367 hsa-miR-6865-3p 0 1 0
chr19:45263113|45263367 hsa-miR-5088-3p 0 1 0
chr19:45263113|45263367 hsa-miR-328-3p 1 0 0
chr19:45263113|45263367 hsa-miR-6777-3p 1 0 0
chr19:45263113|45263367 hsa-miR-449b-3p 1 0 0
chr19:45263113|45263367 hsa-miR-6734-3p 1 0 0
chr19:45263113|45263367 hsa-miR-4639-3p 0 1 0
chr19:45263113|45263367 hsa-miR-4802-5p 0 1 0
chr19:45263113|45263367 hsa-miR-6750-3p 1 0 0
chr19:45263113|45263367 hsa-miR-4763-3p 1 0 0
chr19:45263113|45263367 hsa-miR-6787-5p 1 1 0
chr19:45263113|45263367 hsa-miR-6812-5p 1 0 0
chr19:45263113|45263367 hsa-miR-6870-5p 1 1 0
chr19:45263113|45263367 hsa-miR-1343-5p 1 0 0
chr19:45263113|45263367 hsa-miR-6726-5p 1 0 0
chr19:45263113|45263367 hsa-miR-6756-5p 1 1 0
chr19:45263113|45263367 hsa-miR-6803-5p 1 0 0
chr19:45263113|45263367 hsa-miR-6813-5p 1 0 0
chr19:45263113|45263367 hsa-miR-6851-5p 1 0 0
chr19:45263113|45263367 hsa-miR-6722-3p 1 0 0
chr19:45263113|45263367 hsa-miR-6763-5p 0 1 0
chr19:45263113|45263367 hsa-miR-7111-5p 1 1 0
chr19:45263113|45263367 hsa-miR-3620-5p 1 0 0
chr19:45263113|45263367 hsa-miR-10396a-5p 1 0 0
chr19:45263113|45263367 hsa-miR-10396b-5p 1 0 0
chr19:45263113|45263367 hsa-miR-1909-3p 1 0 0
chr19:45263113|45263367 hsa-miR-328-5p 1 0 0
chr19:45263113|45263367 hsa-miR-6735-5p 1 0 0
chr19:45263113|45263367 hsa-miR-6794-5p 1 0 0
chr19:45263113|45263367 hsa-miR-6795-5p 1 1 0
chr19:45263113|45263367 hsa-miR-6846-5p 1 1 0
chr19:45263113|45263367 hsa-miR-6848-5p 1 0 0
chr19:45263113|45263367 hsa-miR-6887-5p 1 1 0
chr19:45263113|45263367 hsa-miR-4723-5p 0 1 0
chr19:45263113|45263367 hsa-miR-10394-3p 1 0 0
chr19:45263113|45263367 hsa-miR-6731-5p 1 1 0
chr19:45263113|45263367 hsa-miR-7843-5p 1 1 0
chr19:45263113|45263367 hsa-miR-4665-5p 1 0 0
chr19:45263113|45263367 hsa-miR-4700-5p 0 1 0
chr19:45263113|45263367 hsa-miR-4667-5p 0 1 0
chr19:45263113|45263367 hsa-miR-6784-3p 1 0 0
chr19:45263113|45263367 hsa-miR-6862-3p 1 0 0
chr19:45263113|45263367 hsa-miR-3622a-3p 0 1 0
chr19:45263113|45263367 hsa-miR-4723-3p 1 0 0
chr19:45263113|45263367 hsa-miR-7114-3p 1 1 0
chr19:45263113|45263367 hsa-miR-6884-5p 0 1 0
chr19:45263113|45263367 hsa-miR-4701-5p 0 1 0
chr19:45263113|45263367 hsa-miR-1234-3p 1 0 0
chr19:45263113|45263367 hsa-miR-3622b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr19:45263113|45263367
ORF Type ORF1
Protein Length 53
Nucleotide Length 159
Protein Sequence MGDPFPSRAPAGRVRWVTRLCRKPGSCSPPSPQPHLLQAAGIQLGFVDNLDGN
Nucleotide Sequence TTGGGGGATCCTTTCCCCAGCCGGGCCCCCGCAGGAAGGGTCAGGTGGGTCACCCGGCTGTGCCGGAAGCCTGGCTCCTGCTCTCCCCCGTCTCCCCAGCCTCACCTTCTGCAGGCTGCTGGGATTCAGCTGGGTTTTGTCGATAATCTTGATGGCAAC

CircID chr19:45263113|45263367
ORF Type ORF2
Protein Length 29
Nucleotide Length 87
Protein Sequence MAPALPRLPSLTFCRLLGFSWVLSIILMA
Nucleotide Sequence CTGGCTCCTGCTCTCCCCCGTCTCCCCAGCCTCACCTTCTGCAGGCTGCTGGGATTCAGCTGGGTTTTGTCGATAATCTTGATGGCA

CircID chr19:45263113|45263367
ORF Type ORF3
Protein Length 79
Nucleotide Length 240
Protein Sequence MLGWFRPFMMRTSRNSWAWPERKTEESEGGWLGGSFPQPGPRRKGQVGHPAVPEAWLLLSPVSPASPSAGCWDSAGFCR
Nucleotide Sequence ATGTTGGGGTGGTTTAGGCCCTTCATGATGCGGACTTCTCGGAACAGCTGGGCGTGGCCAGAAAGGAAGACAGAGGAGAGTGAGGGTGGGTGGCTTGGGGGATCCTTTCCCCAGCCGGGCCCCCGCAGGAAGGGTCAGGTGGGTCACCCGGCTGTGCCGGAAGCCTGGCTCCTGCTCTCCCCCGTCTCCCCAGCCTCACCTTCTGCAGGCTGCTGGGATTCAGCTGGGTTTTGTCGATAA

CircID chr19:45263113|45263367
ORF Type ORF4
Protein Length 66
Nucleotide Length 201
Protein Sequence MNPSSLQKVRLGRRGRAGARLPAQPGDPPDPSCGGPAGERIPQATHPHSPLSSFLATPSCSEKSAS
Nucleotide Sequence CTGAATCCCAGCAGCCTGCAGAAGGTGAGGCTGGGGAGACGGGGGAGAGCAGGAGCCAGGCTTCCGGCACAGCCGGGTGACCCACCTGACCCTTCCTGCGGGGGCCCGGCTGGGGAAAGGATCCCCCAAGCCACCCACCCTCACTCTCCTCTGTCTTCCTTTCTGGCCACGCCCAGCTGTTCCGAGAAGTCCGCATCATGA

CircID chr19:45263113|45263367
ORF Type ORF5
Protein Length 46
Nucleotide Length 138
Protein Sequence MTLPAGARLGKGSPKPPTLTLLCLPFWPRPAVPRSPHHEGPKPPQH
Nucleotide Sequence CTGACCCTTCCTGCGGGGGCCCGGCTGGGGAAAGGATCCCCCAAGCCACCCACCCTCACTCTCCTCTGTCTTCCTTTCTGGCCACGCCCAGCTGTTCCGAGAAGTCCGCATCATGAAGGGCCTAAACCACCCCAACAT

CircID chr19:45263113|45263367
ORF Type ORF6
Protein Length 43
Nucleotide Length 129
Protein Sequence MRGPGWGKDPPSHPPSLSSVFLSGHAQLFREVRIMKGLNHPNI
Nucleotide Sequence CTGCGGGGGCCCGGCTGGGGAAAGGATCCCCCAAGCCACCCACCCTCACTCTCCTCTGTCTTCCTTTCTGGCCACGCCCAGCTGTTCCGAGAAGTCCGCATCATGAAGGGCCTAAACCACCCCAACATC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr19:45263113|45263367 NOP56 1 1 0
chr19:45263113|45263367 MOV10 0 0 1
chr19:45263113|45263367 ELAVL1 0 1 0
chr19:45263113|45263367 SF3B4 2 0 0
chr19:45263113|45263367 TBRG4 0 1 0
chr19:45263113|45263367 CNBP 1 0 0
chr19:45263113|45263367 YTHDF1 6 2 0
chr19:45263113|45263367 RPS3 0 0 1
chr19:45263113|45263367 YTHDF2 8 2 0
chr19:45263113|45263367 RBM15B 1 1 0
chr19:45263113|45263367 DGCR8 0 1 0
chr19:45263113|45263367 DDX59 0 2 1
chr19:45263113|45263367 U2AF1 1 0 0
chr19:45263113|45263367 ADAR 1 0 0
chr19:45263113|45263367 U2AF2 7 0 0
chr19:45263113|45263367 DDX54 0 0 1
chr19:45263113|45263367 DDX55 1 0 0
chr19:45263113|45263367 PCBP2 1 0 0
chr19:45263113|45263367 RBM15 1 2 0
chr19:45263113|45263367 CPSF2 0 1 0
chr19:45263113|45263367 PTBP1 2 0 0
chr19:45263113|45263367 DHX9 1 1 1
chr19:45263113|45263367 DDX3X 11 10 0
chr19:45263113|45263367 LIN28B 2 0 0
chr19:45263113|45263367 IGF2BP2 3 1 2
chr19:45263113|45263367 YTHDC1 3 2 0
chr19:45263113|45263367 RBFOX2 3 1 0
chr19:45263113|45263367 PRPF8 0 1 1
chr19:45263113|45263367 CSTF2T 0 1 0
chr19:45263113|45263367 XRN2 0 1 0
chr19:45263113|45263367 ATXN2 2 1 0
chr19:45263113|45263367 EIF4A3 2 2 3
chr19:45263113|45263367 FBL 2 0 2