CircRNA Information

General Information
circRNA Basic Information
CircID chr19:45473093|45473258
Strand +
CircType exon
Host Gene ENSG00000125740.12;
Algorism CIRI2;
Sequence CCCCTGTCCCCAAAGTCACCAGCTCTCCGGCCTCGCCGGGGCACAGAAACAAGAGGCAGGACAAAACACAAGGAATCCTCCTGTCCGATGGCAGTGGCGCAGTGGCCGCAGAGGGTCAGACGGAGGAGCCAGGGAGGCCACACACCCACTTTGTCTCTTCCCCTCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:45473093|45473258 hsa-miR-149-5p 0 0 1
chr19:45473093|45473258 hsa-miR-149-3p 0 0 1
chr19:45473093|45473258 hsa-miR-520g-5p 0 0 1
chr19:45473093|45473258 hsa-miR-520g-3p 0 0 1
chr19:45473093|45473258 hsa-miR-520h 0 0 1
chr19:45473093|45473258 hsa-miR-504-5p 0 0 1
chr19:45473093|45473258 hsa-miR-504-3p 0 0 1
chr19:45473093|45473258 hsa-miR-581 0 0 1
chr19:45473093|45473258 hsa-miR-609 0 0 1
chr19:45473093|45473258 hsa-miR-663b 0 0 1
chr19:45473093|45473258 hsa-miR-502-5p 0 0 1
chr19:45473093|45473258 hsa-miR-644 0 0 1
chr19:45473093|45473258 hsa-miR-138 0 0 1
chr19:45473093|45473258 hsa-miR-147 0 0 1
chr19:45473093|45473258 hsa-miR-608 1 0 0
chr19:45473093|45473258 hsa-miR-639 1 0 0
chr19:45473093|45473258 hsa-miR-644a 0 1 0
chr19:45473093|45473258 hsa-miR-762 1 0 0
chr19:45473093|45473258 hsa-miR-892b 1 0 0
chr19:45473093|45473258 hsa-miR-665 1 0 0
chr19:45473093|45473258 hsa-miR-3164 0 1 0
chr19:45473093|45473258 hsa-miR-4252 0 1 0
chr19:45473093|45473258 hsa-miR-4268 0 1 0
chr19:45473093|45473258 hsa-miR-4271 1 1 0
chr19:45473093|45473258 hsa-miR-4285 0 1 0
chr19:45473093|45473258 hsa-miR-4455 0 1 0
chr19:45473093|45473258 hsa-miR-4689 1 0 0
chr19:45473093|45473258 hsa-miR-4739 1 0 0
chr19:45473093|45473258 hsa-miR-8089 1 1 0
chr19:45473093|45473258 hsa-miR-138-5p 0 1 0
chr19:45473093|45473258 hsa-miR-6734-5p 0 1 0
chr19:45473093|45473258 hsa-miR-4726-3p 1 0 0
chr19:45473093|45473258 hsa-miR-4687-3p 1 0 0
chr19:45473093|45473258 hsa-miR-6089 1 1 0
chr19:45473093|45473258 hsa-miR-4722-5p 1 0 0
chr19:45473093|45473258 hsa-miR-197-5p 1 0 0
chr19:45473093|45473258 hsa-miR-7845-5p 1 0 0
chr19:45473093|45473258 hsa-miR-1915-5p 1 0 0
chr19:45473093|45473258 hsa-miR-6798-5p 1 0 0
chr19:45473093|45473258 hsa-miR-6782-5p 1 0 0
chr19:45473093|45473258 hsa-miR-6810-5p 0 1 0
chr19:45473093|45473258 hsa-miR-1908-5p 0 1 0
chr19:45473093|45473258 hsa-miR-7113-3p 0 1 0
chr19:45473093|45473258 hsa-miR-6878-3p 0 1 0
chr19:45473093|45473258 hsa-miR-6818-3p 0 1 0
chr19:45473093|45473258 hsa-miR-4743-5p 1 1 0
chr19:45473093|45473258 hsa-miR-378a-5p 1 0 0
chr19:45473093|45473258 hsa-miR-6800-5p 1 0 0
chr19:45473093|45473258 hsa-miR-4707-5p 1 1 0
chr19:45473093|45473258 hsa-miR-6889-3p 0 1 0
chr19:45473093|45473258 hsa-miR-6778-3p 0 1 0
chr19:45473093|45473258 hsa-miR-2276-5p 0 1 0
chr19:45473093|45473258 hsa-miR-6812-3p 1 0 0
chr19:45473093|45473258 hsa-miR-6838-3p 1 0 0
chr19:45473093|45473258 hsa-miR-4763-3p 1 0 0
chr19:45473093|45473258 hsa-miR-6787-5p 1 1 0
chr19:45473093|45473258 hsa-miR-6743-5p 1 0 0
chr19:45473093|45473258 hsa-miR-5196-5p 1 0 0
chr19:45473093|45473258 hsa-miR-10396b-5p 1 0 0
chr19:45473093|45473258 hsa-miR-4725-3p 0 1 0
chr19:45473093|45473258 hsa-miR-6729-5p 1 0 0
chr19:45473093|45473258 hsa-miR-6887-5p 1 0 0
chr19:45473093|45473258 hsa-miR-939-5p 1 1 0
chr19:45473093|45473258 hsa-miR-6731-5p 0 1 0
chr19:45473093|45473258 hsa-miR-6736-5p 1 0 0
chr19:45473093|45473258 hsa-miR-6791-3p 0 1 0
chr19:45473093|45473258 hsa-miR-324-3p 0 1 0
chr19:45473093|45473258 hsa-miR-10398-3p 1 1 0
chr19:45473093|45473258 hsa-miR-4723-3p 1 1 0
chr19:45473093|45473258 hsa-miR-3085-3p 1 0 0
chr19:45473093|45473258 hsa-miR-6783-3p 1 0 0
chr19:45473093|45473258 hsa-miR-6817-5p 0 1 0
chr19:45473093|45473258 hsa-miR-6781-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr19:45473093|45473258
ORF Type ORF1
Protein Length 54
Nucleotide Length 162
Protein Sequence MSPKSPALRPRRGTETRGRTKHKESSCPMAVAQWPQRVRRRSQGGHTPTLSLPL
Nucleotide Sequence CTGTCCCCAAAGTCACCAGCTCTCCGGCCTCGCCGGGGCACAGAAACAAGAGGCAGGACAAAACACAAGGAATCCTCCTGTCCGATGGCAGTGGCGCAGTGGCCGCAGAGGGTCAGACGGAGGAGCCAGGGAGGCCACACACCCACTTTGTCTCTTCCCCTC

CircID chr19:45473093|45473258
ORF Type ORF2
Protein Length 28
Nucleotide Length 84
Protein Sequence MSDGSGAVAAEGQTEEPGRPHTHFVSSP
Nucleotide Sequence CTGTCCGATGGCAGTGGCGCAGTGGCCGCAGAGGGTCAGACGGAGGAGCCAGGGAGGCCACACACCCACTTTGTCTCTTCCCCT

CircID chr19:45473093|45473258
ORF Type ORF3
Protein Length 31
Nucleotide Length 93
Protein Sequence MPSDRRIPCVLSCLLFLCPGEAGELVTLGTG
Nucleotide Sequence CTGCCATCGGACAGGAGGATTCCTTGTGTTTTGTCCTGCCTCTTGTTTCTGTGCCCCGGCGAGGCCGGAGAGCTGGTGACTTTGGGGACAGGG

CircID chr19:45473093|45473258
ORF Type ORF4
Protein Length 38
Nucleotide Length 117
Protein Sequence MAPPSDPLRPLRHCHRTGGFLVFCPASCFCAPARPESW
Nucleotide Sequence CTGGCTCCTCCGTCTGACCCTCTGCGGCCACTGCGCCACTGCCATCGGACAGGAGGATTCCTTGTGTTTTGTCCTGCCTCTTGTTTCTGTGCCCCGGCGAGGCCGGAGAGCTGGTGA

CircID chr19:45473093|45473258
ORF Type ORF5
Protein Length 39
Nucleotide Length 117
Protein Sequence MTLCGHCATAIGQEDSLCFVLPLVSVPRRGRRAGDFGDR
Nucleotide Sequence CTGACCCTCTGCGGCCACTGCGCCACTGCCATCGGACAGGAGGATTCCTTGTGTTTTGTCCTGCCTCTTGTTTCTGTGCCCCGGCGAGGCCGGAGAGCTGGTGACTTTGGGGACAGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites