CircRNA Information

General Information
circRNA Basic Information
CircID chr19:45591876|45592022
Strand -
CircType exon
Host Gene ENSG00000177464.4;
Algorism CIRI2;
Sequence TTCGGCTTCTGGGGCGCTTCCCCTGGCCCACGGGGGCTGTGGGGCCACAGGGAGCGGGAGGCCATGGGGCCCCCTGAGCCCCTTCCTTGGAGGCTCAGGGGAACATGGTGGGATGTGGTCTACAGGGAAGAGATGAGGTTGGGTAGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:45591876|45592022 hsa-miR-1236-5p 0 0 1
chr19:45591876|45592022 hsa-miR-1236-3p 0 0 1
chr19:45591876|45592022 hsa-miR-663b 0 1 1
chr19:45591876|45592022 hsa-miR-1266-5p 0 0 1
chr19:45591876|45592022 hsa-miR-1266-3p 0 0 1
chr19:45591876|45592022 hsa-miR-296-5p 0 0 1
chr19:45591876|45592022 hsa-miR-339-5p 0 0 1
chr19:45591876|45592022 hsa-miR-1224-3p 1 0 1
chr19:45591876|45592022 hsa-miR-331-3p 0 0 1
chr19:45591876|45592022 hsa-miR-125a-5p 0 1 1
chr19:45591876|45592022 hsa-miR-1260 0 0 1
chr19:45591876|45592022 hsa-miR-1274a 0 0 1
chr19:45591876|45592022 hsa-miR-1280 0 0 1
chr19:45591876|45592022 hsa-miR-125b 0 0 1
chr19:45591876|45592022 hsa-miR-1274b 0 0 1
chr19:45591876|45592022 hsa-miR-24 0 0 1
chr19:45591876|45592022 hsa-miR-4323 0 1 0
chr19:45591876|45592022 hsa-miR-4437 0 1 0
chr19:45591876|45592022 hsa-miR-4476 0 1 0
chr19:45591876|45592022 hsa-miR-4739 0 1 0
chr19:45591876|45592022 hsa-miR-5193 1 0 0
chr19:45591876|45592022 hsa-miR-5704 1 1 0
chr19:45591876|45592022 hsa-miR-6085 0 1 0
chr19:45591876|45592022 hsa-miR-7706 0 1 0
chr19:45591876|45592022 hsa-miR-6836-3p 1 0 0
chr19:45591876|45592022 hsa-miR-874-5p 0 1 0
chr19:45591876|45592022 hsa-miR-3189-5p 1 1 0
chr19:45591876|45592022 hsa-miR-6849-3p 1 0 0
chr19:45591876|45592022 hsa-miR-6783-5p 0 1 0
chr19:45591876|45592022 hsa-miR-6805-5p 0 1 0
chr19:45591876|45592022 hsa-miR-6858-3p 1 0 0
chr19:45591876|45592022 hsa-miR-3934-3p 0 1 0
chr19:45591876|45592022 hsa-miR-4640-5p 0 1 0
chr19:45591876|45592022 hsa-miR-7113-3p 0 1 0
chr19:45591876|45592022 hsa-miR-767-5p 0 1 0
chr19:45591876|45592022 hsa-miR-6878-3p 0 1 0
chr19:45591876|45592022 hsa-miR-7111-3p 1 0 0
chr19:45591876|45592022 hsa-miR-6830-5p 0 1 0
chr19:45591876|45592022 hsa-miR-146b-3p 0 1 0
chr19:45591876|45592022 hsa-miR-7106-3p 0 1 0
chr19:45591876|45592022 hsa-miR-4758-3p 1 0 0
chr19:45591876|45592022 hsa-miR-6793-3p 1 0 0
chr19:45591876|45592022 hsa-miR-2114-3p 0 1 0
chr19:45591876|45592022 hsa-miR-5591-3p 1 0 0
chr19:45591876|45592022 hsa-miR-4283 0 1 0
chr19:45591876|45592022 hsa-miR-1285-5p 0 1 0
chr19:45591876|45592022 hsa-miR-4717-5p 1 1 0
chr19:45591876|45592022 hsa-miR-627-5p 0 1 0
chr19:45591876|45592022 hsa-let-7b-3p 1 0 0
chr19:45591876|45592022 hsa-miR-4716-5p 0 1 0
chr19:45591876|45592022 hsa-miR-6813-5p 0 1 0
chr19:45591876|45592022 hsa-miR-6780b-5p 0 1 0
chr19:45591876|45592022 hsa-miR-4725-3p 0 1 0
chr19:45591876|45592022 hsa-miR-4726-5p 0 1 0
chr19:45591876|45592022 hsa-miR-6876-5p 0 1 0
chr19:45591876|45592022 hsa-miR-6891-5p 0 1 0
chr19:45591876|45592022 hsa-miR-6751-3p 0 1 0
chr19:45591876|45592022 hsa-miR-6891-3p 1 1 0
chr19:45591876|45592022 hsa-miR-6827-3p 1 0 0
chr19:45591876|45592022 hsa-miR-6843-3p 0 1 0
chr19:45591876|45592022 hsa-miR-135b-5p 0 1 0
chr19:45591876|45592022 hsa-miR-125b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr19:45591876|45592022
ORF Type ORF1
Protein Length 37
Nucleotide Length 111
Protein Sequence MWGHREREAMGPPEPLPWRLRGTWWDVVYREEMRLGR
Nucleotide Sequence CTGTGGGGCCACAGGGAGCGGGAGGCCATGGGGCCCCCTGAGCCCCTTCCTTGGAGGCTCAGGGGAACATGGTGGGATGTGGTCTACAGGGAAGAGATGAGGTTGGGTAGG

CircID chr19:45591876|45592022
ORF Type ORF2
Protein Length 37
Nucleotide Length 114
Protein Sequence MAHGGCGATGSGRPWGPLSPFLGGSGEHGGMWSTGKR
Nucleotide Sequence CTGGCCCACGGGGGCTGTGGGGCCACAGGGAGCGGGAGGCCATGGGGCCCCCTGAGCCCCTTCCTTGGAGGCTCAGGGGAACATGGTGGGATGTGGTCTACAGGGAAGAGATGA

CircID chr19:45591876|45592022
ORF Type ORF3
Protein Length 32
Nucleotide Length 96
Protein Sequence MSLQGRGSGGPMASRSLWPHSPRGPGEAPQKP
Nucleotide Sequence CTGAGCCTCCAAGGAAGGGGCTCAGGGGGCCCCATGGCCTCCCGCTCCCTGTGGCCCCACAGCCCCCGTGGGCCAGGGGAAGCGCCCCAGAAGCCG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites