CircRNA Information

General Information
circRNA Basic Information
CircID chr19:46606269|46606439
Strand -
CircType exon
Host Gene ENSG00000160014.15;
Algorism CIRI2;
Sequence CTCTGCGCTTGCCTGCGCTTTGCACTTCCTTTCGCATGTGCCTGCGCCTGCCTGTTCTGCTGGCGGAAGTGCCTCCCCAGTGCTTTGCATGGGCAGCTCCTTCCCGTCCCTTAGCTCAGATGTCCCCTCGGGGAGGCCTTCCCTGACCCCCATCTCAAGTACACAGCCTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:46606269|46606439 hsa-miR-19a-5p 0 0 1
chr19:46606269|46606439 hsa-miR-19a-3p 0 0 1
chr19:46606269|46606439 hsa-miR-22-5p 0 0 1
chr19:46606269|46606439 hsa-miR-22-3p 0 0 1
chr19:46606269|46606439 hsa-miR-130a-5p 0 0 1
chr19:46606269|46606439 hsa-miR-130a-3p 0 0 1
chr19:46606269|46606439 hsa-miR-143-5p 0 0 1
chr19:46606269|46606439 hsa-miR-143-3p 0 0 1
chr19:46606269|46606439 hsa-miR-301a-5p 0 0 1
chr19:46606269|46606439 hsa-miR-301a-3p 0 0 1
chr19:46606269|46606439 hsa-miR-130b-5p 0 0 1
chr19:46606269|46606439 hsa-miR-130b-3p 0 0 1
chr19:46606269|46606439 hsa-miR-518f-5p 0 0 1
chr19:46606269|46606439 hsa-miR-518f-3p 0 0 1
chr19:46606269|46606439 hsa-miR-518b 0 0 1
chr19:46606269|46606439 hsa-miR-518c-5p 0 0 1
chr19:46606269|46606439 hsa-miR-518c-3p 0 0 1
chr19:46606269|46606439 hsa-miR-527 0 0 1
chr19:46606269|46606439 hsa-miR-558 0 0 1
chr19:46606269|46606439 hsa-miR-610 1 0 1
chr19:46606269|46606439 hsa-miR-650 0 1 1
chr19:46606269|46606439 hsa-miR-454-5p 0 0 1
chr19:46606269|46606439 hsa-miR-454-3p 0 0 1
chr19:46606269|46606439 hsa-miR-708-5p 0 0 1
chr19:46606269|46606439 hsa-miR-708-3p 0 0 1
chr19:46606269|46606439 hsa-miR-301b-5p 0 0 1
chr19:46606269|46606439 hsa-miR-301b-3p 0 0 1
chr19:46606269|46606439 hsa-miR-922 0 0 1
chr19:46606269|46606439 hsa-miR-939-5p 0 0 1
chr19:46606269|46606439 hsa-miR-939-3p 0 0 1
chr19:46606269|46606439 hsa-miR-940 0 0 1
chr19:46606269|46606439 hsa-miR-330-3p 0 1 1
chr19:46606269|46606439 hsa-miR-28-5p 0 0 1
chr19:46606269|46606439 hsa-miR-519b-3p 0 0 1
chr19:46606269|46606439 hsa-miR-519c-3p 0 0 1
chr19:46606269|46606439 hsa-miR-518a-5p 0 0 1
chr19:46606269|46606439 hsa-miR-518a-3p 0 0 1
chr19:46606269|46606439 hsa-miR-518d-3p 0 0 1
chr19:46606269|46606439 hsa-miR-19b 0 0 1
chr19:46606269|46606439 hsa-miR-519a 0 0 1
chr19:46606269|46606439 hsa-miR-762 1 0 0
chr19:46606269|46606439 hsa-miR-3188 1 0 0
chr19:46606269|46606439 hsa-miR-3196 1 0 0
chr19:46606269|46606439 hsa-miR-3197 1 1 0
chr19:46606269|46606439 hsa-miR-4303 1 1 0
chr19:46606269|46606439 hsa-miR-3666 0 1 0
chr19:46606269|46606439 hsa-miR-4436a 0 1 0
chr19:46606269|46606439 hsa-miR-4493 0 1 0
chr19:46606269|46606439 hsa-miR-4514 0 1 0
chr19:46606269|46606439 hsa-miR-4530 1 1 0
chr19:46606269|46606439 hsa-miR-4533 0 1 0
chr19:46606269|46606439 hsa-miR-4641 0 1 0
chr19:46606269|46606439 hsa-miR-4656 1 0 0
chr19:46606269|46606439 hsa-miR-4663 1 0 0
chr19:46606269|46606439 hsa-miR-4681 0 1 0
chr19:46606269|46606439 hsa-miR-4682 1 0 0
chr19:46606269|46606439 hsa-miR-4692 0 1 0
chr19:46606269|46606439 hsa-miR-4741 1 0 0
chr19:46606269|46606439 hsa-miR-5194 1 0 0
chr19:46606269|46606439 hsa-miR-6085 1 0 0
chr19:46606269|46606439 hsa-miR-7974 1 0 0
chr19:46606269|46606439 hsa-miR-12119 1 0 0
chr19:46606269|46606439 hsa-miR-12128 0 1 0
chr19:46606269|46606439 hsa-miR-6825-5p 0 1 0
chr19:46606269|46606439 hsa-miR-4687-3p 1 0 0
chr19:46606269|46606439 hsa-miR-3622a-5p 1 0 0
chr19:46606269|46606439 hsa-miR-4653-3p 1 0 0
chr19:46606269|46606439 hsa-miR-7160-5p 1 0 0
chr19:46606269|46606439 hsa-miR-6806-5p 1 0 0
chr19:46606269|46606439 hsa-miR-6776-5p 1 0 0
chr19:46606269|46606439 hsa-miR-7845-5p 1 0 0
chr19:46606269|46606439 hsa-miR-1292-5p 1 0 0
chr19:46606269|46606439 hsa-miR-3180-3p 1 0 0
chr19:46606269|46606439 hsa-miR-6881-5p 1 0 0
chr19:46606269|46606439 hsa-miR-6810-5p 1 0 0
chr19:46606269|46606439 hsa-miR-3127-5p 1 0 0
chr19:46606269|46606439 hsa-miR-296-3p 1 0 0
chr19:46606269|46606439 hsa-miR-4690-5p 0 1 0
chr19:46606269|46606439 hsa-miR-92b-5p 1 1 0
chr19:46606269|46606439 hsa-miR-4446-3p 1 0 0
chr19:46606269|46606439 hsa-miR-149-3p 1 0 0
chr19:46606269|46606439 hsa-miR-6789-5p 1 0 0
chr19:46606269|46606439 hsa-miR-6892-5p 0 1 0
chr19:46606269|46606439 hsa-miR-7112-5p 1 1 0
chr19:46606269|46606439 hsa-miR-664b-5p 1 1 0
chr19:46606269|46606439 hsa-miR-423-5p 1 0 0
chr19:46606269|46606439 hsa-miR-3191-3p 1 0 0
chr19:46606269|46606439 hsa-miR-4773 0 1 0
chr19:46606269|46606439 hsa-miR-6778-3p 0 1 0
chr19:46606269|46606439 hsa-miR-214-3p 0 1 0
chr19:46606269|46606439 hsa-miR-3200-5p 0 1 0
chr19:46606269|46606439 hsa-miR-2277-5p 1 0 0
chr19:46606269|46606439 hsa-miR-3177-3p 1 0 0
chr19:46606269|46606439 hsa-miR-4763-3p 1 0 0
chr19:46606269|46606439 hsa-miR-6816-5p 1 0 0
chr19:46606269|46606439 hsa-miR-6893-5p 1 1 0
chr19:46606269|46606439 hsa-miR-6775-5p 1 0 0
chr19:46606269|46606439 hsa-miR-6743-5p 1 0 0
chr19:46606269|46606439 hsa-miR-6803-5p 0 1 0
chr19:46606269|46606439 hsa-miR-6751-5p 0 1 0
chr19:46606269|46606439 hsa-miR-6797-5p 1 0 0
chr19:46606269|46606439 hsa-miR-4728-5p 1 0 0
chr19:46606269|46606439 hsa-miR-5196-5p 0 1 0
chr19:46606269|46606439 hsa-miR-6738-5p 1 0 0
chr19:46606269|46606439 hsa-miR-6794-5p 1 0 0
chr19:46606269|46606439 hsa-miR-6795-5p 1 0 0
chr19:46606269|46606439 hsa-miR-6887-5p 1 0 0
chr19:46606269|46606439 hsa-miR-6885-5p 1 1 0
chr19:46606269|46606439 hsa-miR-6511b-5p 0 1 0
chr19:46606269|46606439 hsa-miR-4665-5p 1 0 0
chr19:46606269|46606439 hsa-miR-3679-5p 1 0 0
chr19:46606269|46606439 hsa-miR-4747-5p 0 1 0
chr19:46606269|46606439 hsa-miR-6750-5p 1 0 0
chr19:46606269|46606439 hsa-miR-550a-5p 1 0 0
chr19:46606269|46606439 hsa-miR-6762-5p 1 0 0
chr19:46606269|46606439 hsa-miR-3619-5p 1 1 0
chr19:46606269|46606439 hsa-miR-3622b-3p 1 0 0
chr19:46606269|46606439 hsa-miR-7157-3p 1 0 0
chr19:46606269|46606439 hsa-miR-106b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr19:46606269|46606439
ORF Type ORF1
Protein Length 33
Nucleotide Length 102
Protein Sequence MRFALPFACACACLFCWRKCLPSALHGQLLPVP
Nucleotide Sequence CTGCGCTTTGCACTTCCTTTCGCATGTGCCTGCGCCTGCCTGTTCTGCTGGCGGAAGTGCCTCCCCAGTGCTTTGCATGGGCAGCTCCTTCCCGTCCCTTAG

CircID chr19:46606269|46606439
ORF Type ORF2
Protein Length 50
Nucleotide Length 150
Protein Sequence MHFLSHVPAPACSAGGSASPVLCMGSSFPSLSSDVPSGRPSLTPISSTQP
Nucleotide Sequence TTGCACTTCCTTTCGCATGTGCCTGCGCCTGCCTGTTCTGCTGGCGGAAGTGCCTCCCCAGTGCTTTGCATGGGCAGCTCCTTCCCGTCCCTTAGCTCAGATGTCCCCTCGGGGAGGCCTTCCCTGACCCCCATCTCAAGTACACAGCCT

CircID chr19:46606269|46606439
ORF Type ORF3
Protein Length 47
Nucleotide Length 144
Protein Sequence LRLPALCTSFRMCLRLPVLLAEVPPQCFAWAAPSRPLAQMSPRGGLP
Nucleotide Sequence CTGCGCTTGCCTGCGCTTTGCACTTCCTTTCGCATGTGCCTGCGCCTGCCTGTTCTGCTGGCGGAAGTGCCTCCCCAGTGCTTTGCATGGGCAGCTCCTTCCCGTCCCTTAGCTCAGATGTCCCCTCGGGGAGGCCTTCCCTGA

CircID chr19:46606269|46606439
ORF Type ORF4
Protein Length 51
Nucleotide Length 153
Protein Sequence MGVREGLPEGTSELRDGKELPMQSTGEALPPAEQAGAGTCERKCKAQASAE
Nucleotide Sequence ATGGGGGTCAGGGAAGGCCTCCCCGAGGGGACATCTGAGCTAAGGGACGGGAAGGAGCTGCCCATGCAAAGCACTGGGGAGGCACTTCCGCCAGCAGAACAGGCAGGCGCAGGCACATGCGAAAGGAAGTGCAAAGCGCAGGCAAGCGCAGAG

CircID chr19:46606269|46606439
ORF Type ORF5
Protein Length 26
Nucleotide Length 78
Protein Sequence MGRHFRQQNRQAQAHAKGSAKRRQAQ
Nucleotide Sequence CTGGGGAGGCACTTCCGCCAGCAGAACAGGCAGGCGCAGGCACATGCGAAAGGAAGTGCAAAGCGCAGGCAAGCGCAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites