CircNet

General Information

circRNA Basic Information

CircID	chr19:47353073\|47353254
Strand	-
CircType	exon
Host Gene	ENSG00000134815.17;
Algorism	CIRI2;
Sequence	CACCACCGGGCTCCCAGCGAGGAAGAGGCCTTGGAGAAATGGGACTGGAATTGTCCAGAGACGCGTCGCCTCTTGGAAGATGCCTTCTTCCGTGAAGAGGATTACATCCGTCAGGGTTCTGAGGAATGTCAGAAGTTTTGGACCTTCTTTGAACGCCTGCAGAGATTCCAGAATCTCAAGAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:47353073\|47353254	hsa-miR-380-5p	0	0	1
chr19:47353073\|47353254	hsa-miR-380-3p	0	0	1
chr19:47353073\|47353254	hsa-miR-326	0	0	1
chr19:47353073\|47353254	hsa-miR-422a	0	0	1
chr19:47353073\|47353254	hsa-miR-412-5p	0	0	1
chr19:47353073\|47353254	hsa-miR-412-3p	0	0	1
chr19:47353073\|47353254	hsa-miR-493-5p	0	0	1
chr19:47353073\|47353254	hsa-miR-493-3p	0	0	1
chr19:47353073\|47353254	hsa-miR-526b-5p	0	0	1
chr19:47353073\|47353254	hsa-miR-526b-3p	0	0	1
chr19:47353073\|47353254	hsa-miR-593-5p	0	0	1
chr19:47353073\|47353254	hsa-miR-593-3p	0	0	1
chr19:47353073\|47353254	hsa-miR-1323	0	1	1
chr19:47353073\|47353254	hsa-miR-216b-5p	0	0	1
chr19:47353073\|47353254	hsa-miR-216b-3p	0	0	1
chr19:47353073\|47353254	hsa-miR-920	0	0	1
chr19:47353073\|47353254	hsa-miR-1236-5p	0	0	1
chr19:47353073\|47353254	hsa-miR-1236-3p	0	0	1
chr19:47353073\|47353254	hsa-miR-1238-5p	0	0	1
chr19:47353073\|47353254	hsa-miR-1238-3p	0	0	1
chr19:47353073\|47353254	hsa-miR-1205	0	0	1
chr19:47353073\|47353254	hsa-miR-1299	0	1	1
chr19:47353073\|47353254	hsa-miR-548o-3p	0	0	1
chr19:47353073\|47353254	hsa-miR-548o	0	0	1
chr19:47353073\|47353254	hsa-miR-145-5p	0	0	1
chr19:47353073\|47353254	hsa-miR-1184	0	0	1
chr19:47353073\|47353254	hsa-miR-875-3p	0	0	1
chr19:47353073\|47353254	hsa-miR-330-5p	0	0	1
chr19:47353073\|47353254	hsa-miR-515-5p	0	0	1
chr19:47353073\|47353254	hsa-miR-378	0	0	1
chr19:47353073\|47353254	hsa-miR-500	0	0	1
chr19:47353073\|47353254	hsa-miR-516b	0	0	1
chr19:47353073\|47353254	hsa-miR-720	0	0	1
chr19:47353073\|47353254	hsa-miR-612	1	0	0
chr19:47353073\|47353254	hsa-miR-3185	0	1	0
chr19:47353073\|47353254	hsa-miR-141-5p	0	1	0
chr19:47353073\|47353254	hsa-miR-3186-5p	0	1	0
chr19:47353073\|47353254	hsa-miR-4638-3p	1	0	0
chr19:47353073\|47353254	hsa-miR-3925-3p	0	1	0
chr19:47353073\|47353254	hsa-miR-10400-5p	1	1	0
chr19:47353073\|47353254	hsa-miR-6511b-5p	0	1	0
chr19:47353073\|47353254	hsa-miR-2682-3p	0	1	0
chr19:47353073\|47353254	hsa-miR-3910	0	1	0

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:47353073\|47353254
ORF Type	ORF1
Protein Length	50
Nucleotide Length	150
Protein Sequence	MEKWDWNCPETRRLLEDAFFREEDYIRQGSEECQKFWTFFERLQRFQNLK
Nucleotide Sequence	TTGGAGAAATGGGACTGGAATTGTCCAGAGACGCGTCGCCTCTTGGAAGATGCCTTCTTCCGTGAAGAGGATTACATCCGTCAGGGTTCTGAGGAATGTCAGAAGTTTTGGACCTTCTTTGAACGCCTGCAGAGATTCCAGAATCTCAAG

CircID	chr19:47353073\|47353254
ORF Type	ORF2
Protein Length	34
Nucleotide Length	102
Protein Sequence	MPSSVKRITSVRVLRNVRSFGPSLNACRDSRISR
Nucleotide Sequence	ATGCCTTCTTCCGTGAAGAGGATTACATCCGTCAGGGTTCTGAGGAATGTCAGAAGTTTTGGACCTTCTTTGAACGCCTGCAGAGATTCCAGAATCTCAAGA

CircID	chr19:47353073\|47353254
ORF Type	ORF3
Protein Length	57
Nucleotide Length	171
Protein Sequence	MESLQAFKEGPKLLTFLRTLTDVILFTEEGIFQEATRLWTIPVPFLQGLFLAGSPVV
Nucleotide Sequence	CTGGAATCTCTGCAGGCGTTCAAAGAAGGTCCAAAACTTCTGACATTCCTCAGAACCCTGACGGATGTAATCCTCTTCACGGAAGAAGGCATCTTCCAAGAGGCGACGCGTCTCTGGACAATTCCAGTCCCATTTCTCCAAGGCCTCTTCCTCGCTGGGAGCCCGGTGGTG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information