CircRNA Information

General Information
circRNA Basic Information
CircID chr19:48454908|48455025
Strand -
CircType exon
Host Gene ENSG00000105447.11;
Algorism CIRI2;
Sequence AATTTCATCTCCCCATGTCGCCATTTCTTAAAACATTTCTTTTCTCCTTTTCGTTTTCCCAATTGCCCTGTCCGCCTCTATCTTCTCTGTCCCCCTCCATCTAGGTCTCTGTCCCCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:48454908|48455025 hsa-miR-143-5p 0 0 1
chr19:48454908|48455025 hsa-miR-143-3p 0 0 1
chr19:48454908|48455025 hsa-miR-939-5p 0 0 1
chr19:48454908|48455025 hsa-miR-939-3p 0 0 1
chr19:48454908|48455025 hsa-miR-1253 0 0 1
chr19:48454908|48455025 hsa-miR-769-5p 0 0 1
chr19:48454908|48455025 hsa-miR-1273 0 0 1
chr19:48454908|48455025 hsa-miR-184 1 1 0
chr19:48454908|48455025 hsa-miR-206 1 0 0
chr19:48454908|48455025 hsa-miR-658 1 0 0
chr19:48454908|48455025 hsa-miR-762 1 0 0
chr19:48454908|48455025 hsa-miR-1270 1 0 0
chr19:48454908|48455025 hsa-miR-2110 1 0 0
chr19:48454908|48455025 hsa-miR-3138 1 1 0
chr19:48454908|48455025 hsa-miR-3147 1 0 0
chr19:48454908|48455025 hsa-miR-3153 1 1 0
chr19:48454908|48455025 hsa-miR-3154 1 0 0
chr19:48454908|48455025 hsa-miR-3185 1 0 0
chr19:48454908|48455025 hsa-miR-3196 1 0 0
chr19:48454908|48455025 hsa-miR-3197 1 0 0
chr19:48454908|48455025 hsa-miR-4299 1 0 0
chr19:48454908|48455025 hsa-miR-4298 1 1 0
chr19:48454908|48455025 hsa-miR-4271 1 0 0
chr19:48454908|48455025 hsa-miR-3661 1 0 0
chr19:48454908|48455025 hsa-miR-3918 1 0 0
chr19:48454908|48455025 hsa-miR-3945 1 0 0
chr19:48454908|48455025 hsa-miR-4428 1 0 0
chr19:48454908|48455025 hsa-miR-4443 1 0 0
chr19:48454908|48455025 hsa-miR-4462 1 0 0
chr19:48454908|48455025 hsa-miR-4467 1 0 0
chr19:48454908|48455025 hsa-miR-4488 1 0 0
chr19:48454908|48455025 hsa-miR-4489 1 0 0
chr19:48454908|48455025 hsa-miR-4499 1 0 0
chr19:48454908|48455025 hsa-miR-4505 1 0 0
chr19:48454908|48455025 hsa-miR-4514 1 0 0
chr19:48454908|48455025 hsa-miR-4516 1 0 0
chr19:48454908|48455025 hsa-miR-4533 1 0 0
chr19:48454908|48455025 hsa-miR-4534 1 1 0
chr19:48454908|48455025 hsa-miR-4644 1 0 0
chr19:48454908|48455025 hsa-miR-4651 1 0 0
chr19:48454908|48455025 hsa-miR-4656 1 0 0
chr19:48454908|48455025 hsa-miR-4688 1 0 0
chr19:48454908|48455025 hsa-miR-4689 1 0 0
chr19:48454908|48455025 hsa-miR-4706 1 0 0
chr19:48454908|48455025 hsa-miR-4784 1 0 0
chr19:48454908|48455025 hsa-miR-5090 1 0 0
chr19:48454908|48455025 hsa-miR-5093 1 0 0
chr19:48454908|48455025 hsa-miR-5194 1 0 0
chr19:48454908|48455025 hsa-miR-5698 1 0 0
chr19:48454908|48455025 hsa-miR-5739 1 0 0
chr19:48454908|48455025 hsa-miR-6085 1 0 0
chr19:48454908|48455025 hsa-miR-6124 1 0 0
chr19:48454908|48455025 hsa-miR-6132 1 0 0
chr19:48454908|48455025 hsa-miR-6133 1 0 0
chr19:48454908|48455025 hsa-miR-6134 1 0 0
chr19:48454908|48455025 hsa-miR-6165 1 0 0
chr19:48454908|48455025 hsa-miR-7150 1 0 0
chr19:48454908|48455025 hsa-miR-7704 1 0 0
chr19:48454908|48455025 hsa-miR-8053 1 0 0
chr19:48454908|48455025 hsa-miR-8082 1 1 0
chr19:48454908|48455025 hsa-miR-8085 1 0 0
chr19:48454908|48455025 hsa-miR-9500 1 0 0
chr19:48454908|48455025 hsa-miR-12114 1 0 0
chr19:48454908|48455025 hsa-miR-211-3p 1 0 0
chr19:48454908|48455025 hsa-miR-6765-5p 1 0 0
chr19:48454908|48455025 hsa-miR-3150a-3p 0 1 0
chr19:48454908|48455025 hsa-miR-4687-3p 1 0 0
chr19:48454908|48455025 hsa-miR-25-5p 1 0 0
chr19:48454908|48455025 hsa-miR-8071 1 0 0
chr19:48454908|48455025 hsa-miR-6515-5p 1 1 0
chr19:48454908|48455025 hsa-miR-6880-5p 1 0 0
chr19:48454908|48455025 hsa-miR-7847-3p 1 0 0
chr19:48454908|48455025 hsa-miR-6746-5p 1 0 0
chr19:48454908|48455025 hsa-miR-7154-3p 1 0 0
chr19:48454908|48455025 hsa-miR-6727-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6721-5p 1 0 0
chr19:48454908|48455025 hsa-miR-7845-5p 1 1 0
chr19:48454908|48455025 hsa-miR-1292-5p 1 0 0
chr19:48454908|48455025 hsa-miR-3180-3p 1 0 0
chr19:48454908|48455025 hsa-miR-6732-5p 1 0 0
chr19:48454908|48455025 hsa-miR-3190-3p 1 0 0
chr19:48454908|48455025 hsa-miR-6805-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6798-5p 1 0 0
chr19:48454908|48455025 hsa-miR-3126-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6760-5p 1 0 0
chr19:48454908|48455025 hsa-miR-2467-3p 1 0 0
chr19:48454908|48455025 hsa-miR-3150b-3p 1 0 0
chr19:48454908|48455025 hsa-miR-6810-5p 1 1 0
chr19:48454908|48455025 hsa-miR-7109-5p 1 1 0
chr19:48454908|48455025 hsa-miR-6740-5p 1 0 0
chr19:48454908|48455025 hsa-miR-1908-5p 1 0 0
chr19:48454908|48455025 hsa-miR-1228-5p 1 0 0
chr19:48454908|48455025 hsa-miR-92b-5p 1 0 0
chr19:48454908|48455025 hsa-miR-877-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6847-5p 1 0 0
chr19:48454908|48455025 hsa-miR-149-3p 1 0 0
chr19:48454908|48455025 hsa-miR-4668-5p 1 1 0
chr19:48454908|48455025 hsa-miR-6830-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6824-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6789-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6802-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6781-5p 1 0 0
chr19:48454908|48455025 hsa-miR-5010-5p 1 1 0
chr19:48454908|48455025 hsa-miR-6866-5p 1 1 0
chr19:48454908|48455025 hsa-miR-7112-5p 1 1 0
chr19:48454908|48455025 hsa-miR-423-5p 1 0 0
chr19:48454908|48455025 hsa-miR-3191-3p 1 0 0
chr19:48454908|48455025 hsa-miR-6801-5p 1 0 0
chr19:48454908|48455025 hsa-miR-5004-5p 1 0 0
chr19:48454908|48455025 hsa-miR-3177-3p 1 0 0
chr19:48454908|48455025 hsa-miR-3144-5p 1 0 0
chr19:48454908|48455025 hsa-miR-10400-5p 1 0 0
chr19:48454908|48455025 hsa-miR-1207-5p 1 0 0
chr19:48454908|48455025 hsa-miR-4763-3p 1 0 0
chr19:48454908|48455025 hsa-miR-6787-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6816-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6870-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6775-5p 1 1 0
chr19:48454908|48455025 hsa-miR-3180 1 0 0
chr19:48454908|48455025 hsa-miR-6743-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6756-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6803-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6815-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6819-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6851-5p 1 0 0
chr19:48454908|48455025 hsa-miR-11181-3p 1 0 0
chr19:48454908|48455025 hsa-miR-1249-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6779-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6780a-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6788-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6797-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6808-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6875-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6879-5p 1 1 0
chr19:48454908|48455025 hsa-miR-7111-5p 1 0 0
chr19:48454908|48455025 hsa-miR-4728-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6780b-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6836-5p 1 0 0
chr19:48454908|48455025 hsa-miR-1237-5p 1 0 0
chr19:48454908|48455025 hsa-miR-328-5p 1 0 0
chr19:48454908|48455025 hsa-miR-4632-5p 1 0 0
chr19:48454908|48455025 hsa-miR-4726-5p 1 0 0
chr19:48454908|48455025 hsa-miR-4749-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6735-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6738-5p 1 0 0
chr19:48454908|48455025 hsa-miR-675-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6794-5p 1 1 0
chr19:48454908|48455025 hsa-miR-6795-5p 1 1 0
chr19:48454908|48455025 hsa-miR-6846-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6848-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6887-5p 1 1 0
chr19:48454908|48455025 hsa-miR-4436b-3p 1 0 0
chr19:48454908|48455025 hsa-miR-4723-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6831-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6845-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6885-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6856-5p 1 0 0
chr19:48454908|48455025 hsa-miR-1914-3p 1 0 0
chr19:48454908|48455025 hsa-miR-4665-5p 1 0 0
chr19:48454908|48455025 hsa-miR-3679-5p 1 0 0
chr19:48454908|48455025 hsa-miR-4646-5p 1 0 0
chr19:48454908|48455025 hsa-miR-4747-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6891-5p 1 0 0
chr19:48454908|48455025 hsa-miR-4716-3p 1 1 0
chr19:48454908|48455025 hsa-miR-541-3p 1 0 0
chr19:48454908|48455025 hsa-miR-6785-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6849-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6529-5p 1 0 0
chr19:48454908|48455025 hsa-miR-6884-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr19:48454908|48455025
ORF Type ORF1
Protein Length 29
Nucleotide Length 90
Protein Sequence MSPFLKTFLFSFSFSQLPCPPLSSLSPSI
Nucleotide Sequence ATGTCGCCATTTCTTAAAACATTTCTTTTCTCCTTTTCGTTTTCCCAATTGCCCTGTCCGCCTCTATCTTCTCTGTCCCCCTCCATCTAG
CircID chr19:48454908|48455025
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MEGDREDRGGQGNWENEKEKRNVLRNGDMGR
Nucleotide Sequence ATGGAGGGGGACAGAGAAGATAGAGGCGGACAGGGCAATTGGGAAAACGAAAAGGAGAAAAGAAATGTTTTAAGAAATGGCGACATGGGGAGATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab