CircRNA Information

General Information
circRNA Basic Information
CircID chr19:48965503|48965852
Strand -
CircType exon
Host Gene ENSG00000087086.12;
Algorism CIRI2;
Sequence CAACCATGAGCTCCCAGATTCGTCAGAATTATTCCACCGACGTGGAGGCAGCCGTCAACAGCCTGGTCAATTTGTACCTGCAGGCCTCCTACACCTACCTCTCTCTGGTGAGTCCCCAGGACGCCCCTGGCCCTAATTTCCTCCAGCTGCGCACCTCCGGCCCTCACTGCACGCGCCAGCCTTCTTTGTGCGGTCGGGTAAACAGAGGGCGGAGTCCCCTTGGCCTCGCCTCCCGCTAACCATTGTTGCCTCCATCTCTTCCCGTAGGGCTTCTATTTCGACCGCGATGATGTGGCTCTGGAAGGCGTGAGCCACTTCTTCCGCGAATTGGCCGAGGAGAAGCGCGAGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:48965503|48965852 hsa-let-7b-5p 0 0 1
chr19:48965503|48965852 hsa-let-7b-3p 0 0 1
chr19:48965503|48965852 hsa-let-7c-5p 0 0 1
chr19:48965503|48965852 hsa-let-7c-3p 0 0 1
chr19:48965503|48965852 hsa-let-7d-5p 0 0 1
chr19:48965503|48965852 hsa-let-7d-3p 0 0 1
chr19:48965503|48965852 hsa-let-7e-5p 0 0 1
chr19:48965503|48965852 hsa-let-7e-3p 0 0 1
chr19:48965503|48965852 hsa-miR-98-5p 0 0 1
chr19:48965503|48965852 hsa-miR-98-3p 0 0 1
chr19:48965503|48965852 hsa-let-7g-5p 0 0 1
chr19:48965503|48965852 hsa-let-7g-3p 0 0 1
chr19:48965503|48965852 hsa-let-7i-5p 0 0 1
chr19:48965503|48965852 hsa-let-7i-3p 0 0 1
chr19:48965503|48965852 hsa-miR-650 0 0 1
chr19:48965503|48965852 hsa-miR-657 0 0 1
chr19:48965503|48965852 hsa-miR-1296-5p 0 0 1
chr19:48965503|48965852 hsa-miR-1296-3p 0 0 1
chr19:48965503|48965852 hsa-miR-765 1 0 1
chr19:48965503|48965852 hsa-miR-920 0 0 1
chr19:48965503|48965852 hsa-miR-933 1 1 1
chr19:48965503|48965852 hsa-miR-1226-5p 0 0 1
chr19:48965503|48965852 hsa-miR-1226-3p 0 0 1
chr19:48965503|48965852 hsa-miR-1205 0 0 1
chr19:48965503|48965852 hsa-miR-1267 0 0 1
chr19:48965503|48965852 hsa-miR-525-5p 0 0 1
chr19:48965503|48965852 hsa-miR-1207-3p 0 0 1
chr19:48965503|48965852 hsa-miR-520a-5p 0 0 1
chr19:48965503|48965852 hsa-let-7a 0 0 1
chr19:48965503|48965852 hsa-let-7f 0 0 1
chr19:48965503|48965852 hsa-miR-24 0 0 1
chr19:48965503|48965852 hsa-miR-637 1 0 0
chr19:48965503|48965852 hsa-miR-648 1 0 0
chr19:48965503|48965852 hsa-miR-658 0 1 0
chr19:48965503|48965852 hsa-miR-762 1 0 0
chr19:48965503|48965852 hsa-miR-1469 1 0 0
chr19:48965503|48965852 hsa-miR-2909 0 1 0
chr19:48965503|48965852 hsa-miR-3132 1 0 0
chr19:48965503|48965852 hsa-miR-3141 1 0 0
chr19:48965503|48965852 hsa-miR-3175 1 0 0
chr19:48965503|48965852 hsa-miR-3185 1 1 0
chr19:48965503|48965852 hsa-miR-4321 1 0 0
chr19:48965503|48965852 hsa-miR-4266 1 1 0
chr19:48965503|48965852 hsa-miR-4271 1 0 0
chr19:48965503|48965852 hsa-miR-3621 1 0 0
chr19:48965503|48965852 hsa-miR-3652 1 1 0
chr19:48965503|48965852 hsa-miR-3665 1 0 0
chr19:48965503|48965852 hsa-miR-3714 1 0 0
chr19:48965503|48965852 hsa-miR-4430 1 0 0
chr19:48965503|48965852 hsa-miR-4440 1 0 0
chr19:48965503|48965852 hsa-miR-4450 1 0 0
chr19:48965503|48965852 hsa-miR-4458 1 1 0
chr19:48965503|48965852 hsa-miR-3135b 1 1 0
chr19:48965503|48965852 hsa-miR-4466 1 0 0
chr19:48965503|48965852 hsa-miR-4492 1 0 0
chr19:48965503|48965852 hsa-miR-4498 1 0 0
chr19:48965503|48965852 hsa-miR-4510 1 0 0
chr19:48965503|48965852 hsa-miR-4526 1 0 0
chr19:48965503|48965852 hsa-miR-4533 1 0 0
chr19:48965503|48965852 hsa-miR-4534 1 0 0
chr19:48965503|48965852 hsa-miR-1587 1 0 0
chr19:48965503|48965852 hsa-miR-4634 1 0 0
chr19:48965503|48965852 hsa-miR-4651 1 0 0
chr19:48965503|48965852 hsa-miR-4681 0 1 0
chr19:48965503|48965852 hsa-miR-4689 1 0 0
chr19:48965503|48965852 hsa-miR-4706 1 0 0
chr19:48965503|48965852 hsa-miR-4710 0 1 0
chr19:48965503|48965852 hsa-miR-4721 1 0 0
chr19:48965503|48965852 hsa-miR-4734 1 0 0
chr19:48965503|48965852 hsa-miR-4739 1 1 0
chr19:48965503|48965852 hsa-miR-4741 1 0 0
chr19:48965503|48965852 hsa-miR-5739 1 0 0
chr19:48965503|48965852 hsa-miR-5787 1 0 0
chr19:48965503|48965852 hsa-miR-6077 0 1 0
chr19:48965503|48965852 hsa-miR-6088 1 0 0
chr19:48965503|48965852 hsa-miR-6090 1 0 0
chr19:48965503|48965852 hsa-miR-6125 1 0 0
chr19:48965503|48965852 hsa-miR-6127 1 0 0
chr19:48965503|48965852 hsa-miR-6129 1 1 0
chr19:48965503|48965852 hsa-miR-6133 1 0 0
chr19:48965503|48965852 hsa-miR-6165 1 0 0
chr19:48965503|48965852 hsa-miR-8085 1 0 0
chr19:48965503|48965852 hsa-miR-8089 1 1 0
chr19:48965503|48965852 hsa-miR-12114 1 0 0
chr19:48965503|48965852 hsa-miR-138-5p 1 0 0
chr19:48965503|48965852 hsa-miR-432-3p 1 0 0
chr19:48965503|48965852 hsa-miR-504-3p 1 0 0
chr19:48965503|48965852 hsa-miR-6765-5p 0 1 0
chr19:48965503|48965852 hsa-miR-671-5p 1 1 0
chr19:48965503|48965852 hsa-miR-136-3p 0 1 0
chr19:48965503|48965852 hsa-miR-7106-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6825-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6894-5p 1 0 0
chr19:48965503|48965852 hsa-miR-4687-3p 0 1 0
chr19:48965503|48965852 hsa-miR-6799-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6728-5p 1 0 0
chr19:48965503|48965852 hsa-miR-766-5p 0 1 0
chr19:48965503|48965852 hsa-miR-1227-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6089 1 0 0
chr19:48965503|48965852 hsa-miR-3192-5p 0 1 0
chr19:48965503|48965852 hsa-miR-6757-5p 1 1 0
chr19:48965503|48965852 hsa-miR-6880-5p 1 0 0
chr19:48965503|48965852 hsa-miR-7847-3p 1 0 0
chr19:48965503|48965852 hsa-miR-4695-5p 1 1 0
chr19:48965503|48965852 hsa-miR-6746-5p 1 0 0
chr19:48965503|48965852 hsa-miR-4722-5p 1 0 0
chr19:48965503|48965852 hsa-miR-1301-3p 1 0 0
chr19:48965503|48965852 hsa-miR-6727-5p 1 0 0
chr19:48965503|48965852 hsa-miR-197-5p 1 0 0
chr19:48965503|48965852 hsa-miR-8069 1 0 0
chr19:48965503|48965852 hsa-miR-7845-5p 1 0 0
chr19:48965503|48965852 hsa-miR-3180-3p 1 0 0
chr19:48965503|48965852 hsa-miR-6772-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6732-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6798-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6760-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6881-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6782-5p 1 0 0
chr19:48965503|48965852 hsa-miR-5008-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6735-3p 1 0 0
chr19:48965503|48965852 hsa-miR-1343-3p 0 1 0
chr19:48965503|48965852 hsa-miR-7109-5p 1 0 0
chr19:48965503|48965852 hsa-miR-1229-5p 1 0 0
chr19:48965503|48965852 hsa-miR-4640-5p 1 1 0
chr19:48965503|48965852 hsa-miR-6803-3p 0 1 0
chr19:48965503|48965852 hsa-miR-1228-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6771-5p 1 0 0
chr19:48965503|48965852 hsa-miR-485-5p 1 0 0
chr19:48965503|48965852 hsa-miR-7854-3p 1 0 0
chr19:48965503|48965852 hsa-miR-4743-5p 1 1 0
chr19:48965503|48965852 hsa-miR-4787-5p 1 0 0
chr19:48965503|48965852 hsa-miR-4446-3p 1 0 0
chr19:48965503|48965852 hsa-miR-149-3p 1 0 0
chr19:48965503|48965852 hsa-miR-6789-5p 1 1 0
chr19:48965503|48965852 hsa-miR-6802-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6781-5p 1 1 0
chr19:48965503|48965852 hsa-miR-6877-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6895-5p 0 1 0
chr19:48965503|48965852 hsa-miR-3191-3p 1 0 0
chr19:48965503|48965852 hsa-miR-4727-3p 1 0 0
chr19:48965503|48965852 hsa-miR-744-5p 1 0 0
chr19:48965503|48965852 hsa-miR-2276-5p 0 1 0
chr19:48965503|48965852 hsa-miR-2277-5p 1 0 0
chr19:48965503|48965852 hsa-miR-4795-5p 0 1 0
chr19:48965503|48965852 hsa-miR-1207-5p 1 0 0
chr19:48965503|48965852 hsa-miR-1233-5p 1 1 0
chr19:48965503|48965852 hsa-miR-1273h-5p 1 0 0
chr19:48965503|48965852 hsa-miR-4763-3p 1 0 0
chr19:48965503|48965852 hsa-miR-6769b-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6778-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6787-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6812-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6870-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6893-5p 1 0 0
chr19:48965503|48965852 hsa-miR-1343-5p 1 0 0
chr19:48965503|48965852 hsa-miR-5001-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6743-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6752-5p 1 1 0
chr19:48965503|48965852 hsa-miR-6754-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6769a-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6851-5p 1 1 0
chr19:48965503|48965852 hsa-miR-7107-5p 1 0 0
chr19:48965503|48965852 hsa-miR-7110-5p 1 0 0
chr19:48965503|48965852 hsa-miR-10401-5p 1 0 0
chr19:48965503|48965852 hsa-miR-11181-3p 1 0 0
chr19:48965503|48965852 hsa-miR-1249-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6763-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6779-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6797-5p 1 0 0
chr19:48965503|48965852 hsa-miR-7111-5p 1 0 0
chr19:48965503|48965852 hsa-miR-3620-5p 1 0 0
chr19:48965503|48965852 hsa-miR-4728-5p 0 1 0
chr19:48965503|48965852 hsa-miR-5196-5p 1 0 0
chr19:48965503|48965852 hsa-miR-10396a-5p 1 0 0
chr19:48965503|48965852 hsa-miR-1237-5p 1 1 0
chr19:48965503|48965852 hsa-miR-1909-3p 1 0 0
chr19:48965503|48965852 hsa-miR-328-5p 1 1 0
chr19:48965503|48965852 hsa-miR-4649-5p 1 0 0
chr19:48965503|48965852 hsa-miR-4726-5p 1 1 0
chr19:48965503|48965852 hsa-miR-4749-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6738-5p 1 0 0
chr19:48965503|48965852 hsa-miR-675-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6777-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6794-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6846-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6848-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6831-5p 1 0 0
chr19:48965503|48965852 hsa-miR-4758-5p 1 0 0
chr19:48965503|48965852 hsa-miR-365a-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6511b-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6731-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6758-5p 1 1 0
chr19:48965503|48965852 hsa-miR-6856-5p 0 1 0
chr19:48965503|48965852 hsa-miR-1271-3p 1 0 0
chr19:48965503|48965852 hsa-miR-3679-5p 1 0 0
chr19:48965503|48965852 hsa-miR-4646-5p 1 0 0
chr19:48965503|48965852 hsa-miR-4747-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6785-5p 1 0 0
chr19:48965503|48965852 hsa-miR-4667-5p 0 1 0
chr19:48965503|48965852 hsa-miR-6791-5p 1 0 0
chr19:48965503|48965852 hsa-miR-6762-5p 1 0 0
chr19:48965503|48965852 hsa-miR-4756-5p 1 0 0
chr19:48965503|48965852 hsa-miR-5581-5p 0 1 0
chr19:48965503|48965852 hsa-miR-10394-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr19:48965503|48965852
ORF Type ORF1
Protein Length 47
Nucleotide Length 144
Protein Sequence MHAPAFFVRSGKQRAESPWPRLPLTIVASISSRRASISTAMMWLWKA
Nucleotide Sequence CTGCACGCGCCAGCCTTCTTTGTGCGGTCGGGTAAACAGAGGGCGGAGTCCCCTTGGCCTCGCCTCCCGCTAACCATTGTTGCCTCCATCTCTTCCCGTAGGGCTTCTATTTCGACCGCGATGATGTGGCTCTGGAAGGCGTGA

CircID chr19:48965503|48965852
ORF Type ORF2
Protein Length 77
Nucleotide Length 234
Protein Sequence MSSQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLVSPQDAPGPNFLQLRTSGPHCTRQPSLCGRVNRGRSPLGLASR
Nucleotide Sequence ATGAGCTCCCAGATTCGTCAGAATTATTCCACCGACGTGGAGGCAGCCGTCAACAGCCTGGTCAATTTGTACCTGCAGGCCTCCTACACCTACCTCTCTCTGGTGAGTCCCCAGGACGCCCCTGGCCCTAATTTCCTCCAGCTGCGCACCTCCGGCCCTCACTGCACGCGCCAGCCTTCTTTGTGCGGTCGGGTAAACAGAGGGCGGAGTCCCCTTGGCCTCGCCTCCCGCTAA

CircID chr19:48965503|48965852
ORF Type ORF3
Protein Length 59
Nucleotide Length 177
Protein Sequence MARAVRAGGAQLEEIRARGVLGTHQREVGVGGLQVQIDQAVDGCLHVGGIILTNLGAHG
Nucleotide Sequence CTGGCGCGTGCAGTGAGGGCCGGAGGTGCGCAGCTGGAGGAAATTAGGGCCAGGGGCGTCCTGGGGACTCACCAGAGAGAGGTAGGTGTAGGAGGCCTGCAGGTACAAATTGACCAGGCTGTTGACGGCTGCCTCCACGTCGGTGGAATAATTCTGACGAATCTGGGAGCTCATGGT

CircID chr19:48965503|48965852
ORF Type ORF4
Protein Length 40
Nucleotide Length 123
Protein Sequence MEATMVSGRRGQGDSALCLPDRTKKAGACSEGRRCAAGGN
Nucleotide Sequence ATGGAGGCAACAATGGTTAGCGGGAGGCGAGGCCAAGGGGACTCCGCCCTCTGTTTACCCGACCGCACAAAGAAGGCTGGCGCGTGCAGTGAGGGCCGGAGGTGCGCAGCTGGAGGAAATTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites