CircRNA Information

General Information
circRNA Basic Information
CircID chr19:49098432|49098693
Strand -
CircType exon
Host Gene ENSG00000104852.13;
Algorism CIRI2;
Sequence CCTCACAATGATCCCAATGCTCAGGGGGATGCCTTCAAGACTCTCTTCGTGGCGAGAGTGGTAAGTCCCCAGCTCCTAGCTCCTGGAACCCCACGCTGCTGAGAGCCTGGGTCTGGCACAAAGGTCAAATAGGCTAGGTACAGGGGAATGTTCCAGGGGCTGTGGGACAGCTCTGTTCTCCCATTTAACGTCATATCCATCTCCTTGTAGAATTATGACACAACAGAATCCAAGCTCCGGAGAGAGTTTGAGGTGTACGGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:49098432|49098693 hsa-miR-192-5p 0 0 1
chr19:49098432|49098693 hsa-miR-192-3p 0 0 1
chr19:49098432|49098693 hsa-miR-214-5p 0 0 1
chr19:49098432|49098693 hsa-miR-214-3p 0 0 1
chr19:49098432|49098693 hsa-miR-215-5p 0 0 1
chr19:49098432|49098693 hsa-miR-215-3p 0 0 1
chr19:49098432|49098693 hsa-miR-484 0 0 1
chr19:49098432|49098693 hsa-miR-522-5p 0 0 1
chr19:49098432|49098693 hsa-miR-522-3p 0 0 1
chr19:49098432|49098693 hsa-miR-503-5p 0 0 1
chr19:49098432|49098693 hsa-miR-503-3p 0 0 1
chr19:49098432|49098693 hsa-miR-592 0 0 1
chr19:49098432|49098693 hsa-miR-597-5p 0 0 1
chr19:49098432|49098693 hsa-miR-597-3p 0 0 1
chr19:49098432|49098693 hsa-miR-599 0 0 1
chr19:49098432|49098693 hsa-miR-624-5p 0 0 1
chr19:49098432|49098693 hsa-miR-624-3p 0 0 1
chr19:49098432|49098693 hsa-miR-638 0 0 1
chr19:49098432|49098693 hsa-miR-708-5p 0 0 1
chr19:49098432|49098693 hsa-miR-708-3p 0 0 1
chr19:49098432|49098693 hsa-miR-665 0 0 1
chr19:49098432|49098693 hsa-miR-543 0 0 1
chr19:49098432|49098693 hsa-miR-922 0 0 1
chr19:49098432|49098693 hsa-miR-924 0 0 1
chr19:49098432|49098693 hsa-miR-1227-5p 0 0 1
chr19:49098432|49098693 hsa-miR-1227-3p 0 0 1
chr19:49098432|49098693 hsa-miR-1203 0 1 1
chr19:49098432|49098693 hsa-miR-1294 0 0 1
chr19:49098432|49098693 hsa-miR-1267 0 0 1
chr19:49098432|49098693 hsa-miR-486-5p 0 1 1
chr19:49098432|49098693 hsa-miR-1283 0 0 1
chr19:49098432|49098693 hsa-miR-324-5p 1 1 1
chr19:49098432|49098693 hsa-miR-28-5p 0 0 1
chr19:49098432|49098693 hsa-miR-331-3p 0 1 1
chr19:49098432|49098693 hsa-miR-188-3p 0 0 1
chr19:49098432|49098693 hsa-miR-769-3p 0 0 1
chr19:49098432|49098693 hsa-miR-125a-5p 0 0 1
chr19:49098432|49098693 hsa-miR-450b-3p 0 1 1
chr19:49098432|49098693 hsa-miR-371-5p 0 0 1
chr19:49098432|49098693 hsa-miR-125b 0 0 1
chr19:49098432|49098693 hsa-miR-637 0 1 0
chr19:49098432|49098693 hsa-miR-3155a 0 1 0
chr19:49098432|49098693 hsa-miR-3170 0 1 0
chr19:49098432|49098693 hsa-miR-4308 0 1 0
chr19:49098432|49098693 hsa-miR-4319 0 1 0
chr19:49098432|49098693 hsa-miR-3938 0 1 0
chr19:49098432|49098693 hsa-miR-3945 1 0 0
chr19:49098432|49098693 hsa-miR-4428 0 1 0
chr19:49098432|49098693 hsa-miR-4453 0 1 0
chr19:49098432|49098693 hsa-miR-3155b 0 1 0
chr19:49098432|49098693 hsa-miR-4538 0 1 0
chr19:49098432|49098693 hsa-miR-4635 0 1 0
chr19:49098432|49098693 hsa-miR-4739 1 0 0
chr19:49098432|49098693 hsa-miR-4791 0 1 0
chr19:49098432|49098693 hsa-miR-6085 0 1 0
chr19:49098432|49098693 hsa-miR-6090 1 0 0
chr19:49098432|49098693 hsa-miR-7974 1 0 0
chr19:49098432|49098693 hsa-miR-4433a-3p 1 0 0
chr19:49098432|49098693 hsa-miR-23b-5p 0 1 0
chr19:49098432|49098693 hsa-miR-1915-5p 1 0 0
chr19:49098432|49098693 hsa-miR-6871-5p 0 1 0
chr19:49098432|49098693 hsa-miR-6796-5p 0 1 0
chr19:49098432|49098693 hsa-miR-23a-5p 0 1 0
chr19:49098432|49098693 hsa-miR-1226-5p 1 0 0
chr19:49098432|49098693 hsa-miR-6853-5p 0 1 0
chr19:49098432|49098693 hsa-miR-1229-5p 1 0 0
chr19:49098432|49098693 hsa-miR-30c-2-3p 0 1 0
chr19:49098432|49098693 hsa-miR-6878-5p 0 1 0
chr19:49098432|49098693 hsa-miR-6782-3p 0 1 0
chr19:49098432|49098693 hsa-miR-605-3p 0 1 0
chr19:49098432|49098693 hsa-miR-6856-3p 0 1 0
chr19:49098432|49098693 hsa-miR-1914-5p 0 1 0
chr19:49098432|49098693 hsa-miR-4433a-5p 0 1 0
chr19:49098432|49098693 hsa-miR-4433b-5p 0 1 0
chr19:49098432|49098693 hsa-miR-4639-3p 0 1 0
chr19:49098432|49098693 hsa-miR-6729-3p 0 1 0
chr19:49098432|49098693 hsa-miR-1233-5p 1 0 0
chr19:49098432|49098693 hsa-miR-6726-5p 0 1 0
chr19:49098432|49098693 hsa-miR-6788-5p 0 1 0
chr19:49098432|49098693 hsa-miR-939-5p 1 0 0
chr19:49098432|49098693 hsa-miR-30c-1-3p 0 1 0
chr19:49098432|49098693 hsa-miR-6855-5p 0 1 0
chr19:49098432|49098693 hsa-miR-3679-5p 1 0 0
chr19:49098432|49098693 hsa-miR-506-3p 1 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr19:49098432|49098693
ORF Type ORF1
Protein Length 60
Nucleotide Length 180
Protein Sequence MEPHAAESLGLAQRSNRLGTGECSRGCGTALFSHLTSYPSPCRIMTQQNPSSGESLRCTD
Nucleotide Sequence CTGGAACCCCACGCTGCTGAGAGCCTGGGTCTGGCACAAAGGTCAAATAGGCTAGGTACAGGGGAATGTTCCAGGGGCTGTGGGACAGCTCTGTTCTCCCATTTAACGTCATATCCATCTCCTTGTAGAATTATGACACAACAGAATCCAAGCTCCGGAGAGAGTTTGAGGTGTACGGAC

CircID chr19:49098432|49098693
ORF Type ORF2
Protein Length 28
Nucleotide Length 87
Protein Sequence MCQTQALSSVGFQELGAGDLPLSPRRES
Nucleotide Sequence TTGTGCCAGACCCAGGCTCTCAGCAGCGTGGGGTTCCAGGAGCTAGGAGCTGGGGACTTACCACTCTCGCCACGAAGAGAGTCTTGA

CircID chr19:49098432|49098693
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MEHSPVPSLFDLCARPRLSAAWGSRS
Nucleotide Sequence CTGGAACATTCCCCTGTACCTAGCCTATTTGACCTTTGTGCCAGACCCAGGCTCTCAGCAGCGTGGGGTTCCAGGAGCTAG

CircID chr19:49098432|49098693
ORF Type ORF4
Protein Length 59
Nucleotide Length 180
Protein Sequence MDMTLNGRTELSHSPWNIPLYLAYLTFVPDPGSQQRGVPGARSWGLTTLATKRVLKASP
Nucleotide Sequence ATGGATATGACGTTAAATGGGAGAACAGAGCTGTCCCACAGCCCCTGGAACATTCCCCTGTACCTAGCCTATTTGACCTTTGTGCCAGACCCAGGCTCTCAGCAGCGTGGGGTTCCAGGAGCTAGGAGCTGGGGACTTACCACTCTCGCCACGAAGAGAGTCTTGAAGGCATCCCCCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites