CircRNA Information

General Information
circRNA Basic Information
CircID chr19:49200379|49200660
Strand -
CircType exon
Host Gene ENSG00000130529.14;
Algorism CIRI2;
Sequence ATCTTCACGGTCAACAAACAGCTGGGGCCCAAGATCGTCATCGTGAGCAAGATGGTGAGGCAGGGGCGGGGCCAAAGTGGGCGGGGACATAGGGAAAGGGGTGGGGCCAGGGAGGGAGTGGTCCGTGGAGAAGGGGCGTGACTTTGGGGAGCAATGGGGCGTGTTTTTGGGATATAGGGGTGGGGCCAGAGTAGGAAAGGGCGGGGCCAGACTCAGCCACATCTCCCCACAGATGAAGGACGTGTTCTTCTTCCTCTTCTTCCTCGGCGTGTGGCTGGTAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:49200379|49200660 hsa-miR-205-5p 0 0 1
chr19:49200379|49200660 hsa-miR-205-3p 0 0 1
chr19:49200379|49200660 hsa-miR-224-5p 0 0 1
chr19:49200379|49200660 hsa-miR-224-3p 0 0 1
chr19:49200379|49200660 hsa-miR-328-5p 0 0 1
chr19:49200379|49200660 hsa-miR-328-3p 0 0 1
chr19:49200379|49200660 hsa-miR-384 0 0 1
chr19:49200379|49200660 hsa-miR-627-5p 0 0 1
chr19:49200379|49200660 hsa-miR-627-3p 0 0 1
chr19:49200379|49200660 hsa-miR-634 0 0 1
chr19:49200379|49200660 hsa-miR-635 0 0 1
chr19:49200379|49200660 hsa-miR-653-5p 0 0 1
chr19:49200379|49200660 hsa-miR-653-3p 0 0 1
chr19:49200379|49200660 hsa-miR-924 0 0 1
chr19:49200379|49200660 hsa-miR-939-5p 0 0 1
chr19:49200379|49200660 hsa-miR-939-3p 0 0 1
chr19:49200379|49200660 hsa-miR-1178-5p 0 0 1
chr19:49200379|49200660 hsa-miR-1178-3p 0 0 1
chr19:49200379|49200660 hsa-miR-1249-5p 0 0 1
chr19:49200379|49200660 hsa-miR-1249-3p 0 0 1
chr19:49200379|49200660 hsa-miR-296-5p 0 1 1
chr19:49200379|49200660 hsa-miR-491-5p 0 0 1
chr19:49200379|49200660 hsa-miR-576-3p 0 0 1
chr19:49200379|49200660 hsa-miR-515-5p 0 1 1
chr19:49200379|49200660 hsa-miR-326 1 0 0
chr19:49200379|49200660 hsa-miR-557 1 0 0
chr19:49200379|49200660 hsa-miR-602 1 0 0
chr19:49200379|49200660 hsa-miR-647 1 0 0
chr19:49200379|49200660 hsa-miR-1202 1 0 0
chr19:49200379|49200660 hsa-miR-1260a 1 0 0
chr19:49200379|49200660 hsa-miR-1470 1 0 0
chr19:49200379|49200660 hsa-miR-1913 1 0 0
chr19:49200379|49200660 hsa-miR-1976 1 0 0
chr19:49200379|49200660 hsa-miR-3183 1 0 0
chr19:49200379|49200660 hsa-miR-4301 1 0 0
chr19:49200379|49200660 hsa-miR-4258 1 0 0
chr19:49200379|49200660 hsa-miR-4286 1 0 0
chr19:49200379|49200660 hsa-miR-4292 1 0 0
chr19:49200379|49200660 hsa-miR-3916 0 1 0
chr19:49200379|49200660 hsa-miR-4448 1 0 0
chr19:49200379|49200660 hsa-miR-4469 1 1 0
chr19:49200379|49200660 hsa-miR-3972 1 0 0
chr19:49200379|49200660 hsa-miR-4641 1 0 0
chr19:49200379|49200660 hsa-miR-5193 1 0 0
chr19:49200379|49200660 hsa-miR-8077 0 1 0
chr19:49200379|49200660 hsa-miR-6749-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6747-3p 1 1 0
chr19:49200379|49200660 hsa-miR-6836-3p 1 0 0
chr19:49200379|49200660 hsa-miR-212-5p 1 0 0
chr19:49200379|49200660 hsa-miR-149-5p 1 1 0
chr19:49200379|49200660 hsa-miR-3150a-3p 0 1 0
chr19:49200379|49200660 hsa-miR-6825-5p 0 1 0
chr19:49200379|49200660 hsa-miR-6720-5p 1 0 0
chr19:49200379|49200660 hsa-miR-766-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6892-3p 1 0 0
chr19:49200379|49200660 hsa-miR-210-5p 1 1 0
chr19:49200379|49200660 hsa-miR-6881-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6833-5p 1 0 0
chr19:49200379|49200660 hsa-miR-1225-3p 1 0 0
chr19:49200379|49200660 hsa-miR-7847-3p 1 0 0
chr19:49200379|49200660 hsa-miR-874-5p 1 1 0
chr19:49200379|49200660 hsa-miR-4474-3p 0 1 0
chr19:49200379|49200660 hsa-miR-874-3p 1 0 0
chr19:49200379|49200660 hsa-miR-3189-5p 1 1 0
chr19:49200379|49200660 hsa-miR-7110-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6817-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6726-3p 1 0 0
chr19:49200379|49200660 hsa-miR-1915-5p 1 0 0
chr19:49200379|49200660 hsa-miR-6832-3p 1 1 0
chr19:49200379|49200660 hsa-miR-6845-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6796-5p 0 1 0
chr19:49200379|49200660 hsa-miR-877-3p 1 0 0
chr19:49200379|49200660 hsa-miR-4655-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6760-5p 0 1 0
chr19:49200379|49200660 hsa-miR-3194-5p 1 0 0
chr19:49200379|49200660 hsa-miR-6774-3p 1 0 0
chr19:49200379|49200660 hsa-miR-4733-5p 0 1 0
chr19:49200379|49200660 hsa-miR-6882-3p 1 1 0
chr19:49200379|49200660 hsa-miR-4436b-5p 1 0 0
chr19:49200379|49200660 hsa-miR-6772-3p 1 0 0
chr19:49200379|49200660 hsa-miR-4763-5p 1 0 0
chr19:49200379|49200660 hsa-miR-6763-3p 1 0 0
chr19:49200379|49200660 hsa-miR-7108-3p 1 1 0
chr19:49200379|49200660 hsa-miR-1247-5p 1 1 0
chr19:49200379|49200660 hsa-miR-4707-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6803-3p 1 0 0
chr19:49200379|49200660 hsa-miR-4691-3p 0 1 0
chr19:49200379|49200660 hsa-miR-5001-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6757-3p 1 0 0
chr19:49200379|49200660 hsa-miR-7113-3p 1 1 0
chr19:49200379|49200660 hsa-miR-3667-3p 1 0 0
chr19:49200379|49200660 hsa-miR-3191-5p 1 1 0
chr19:49200379|49200660 hsa-miR-4783-5p 1 0 0
chr19:49200379|49200660 hsa-miR-6861-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6878-3p 1 1 0
chr19:49200379|49200660 hsa-miR-6809-3p 1 0 0
chr19:49200379|49200660 hsa-miR-4667-3p 1 0 0
chr19:49200379|49200660 hsa-miR-4446-5p 1 0 0
chr19:49200379|49200660 hsa-miR-1304-3p 1 0 0
chr19:49200379|49200660 hsa-miR-146b-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6786-3p 1 0 0
chr19:49200379|49200660 hsa-miR-339-5p 1 0 0
chr19:49200379|49200660 hsa-miR-3190-5p 1 0 0
chr19:49200379|49200660 hsa-miR-4646-3p 1 0 0
chr19:49200379|49200660 hsa-miR-211-5p 1 0 0
chr19:49200379|49200660 hsa-miR-1237-3p 1 0 0
chr19:49200379|49200660 hsa-miR-1236-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6743-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6811-3p 1 0 0
chr19:49200379|49200660 hsa-miR-7106-3p 1 1 0
chr19:49200379|49200660 hsa-miR-6813-3p 1 0 0
chr19:49200379|49200660 hsa-miR-4732-3p 1 0 0
chr19:49200379|49200660 hsa-miR-3619-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6804-3p 1 0 0
chr19:49200379|49200660 hsa-miR-4758-3p 1 1 0
chr19:49200379|49200660 hsa-miR-6867-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6793-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6778-3p 1 0 0
chr19:49200379|49200660 hsa-miR-519d-5p 1 1 0
chr19:49200379|49200660 hsa-miR-1224-3p 1 0 0
chr19:49200379|49200660 hsa-miR-2276-5p 1 0 0
chr19:49200379|49200660 hsa-miR-6752-3p 1 1 0
chr19:49200379|49200660 hsa-miR-6872-3p 1 0 0
chr19:49200379|49200660 hsa-miR-4632-3p 1 1 0
chr19:49200379|49200660 hsa-miR-6865-3p 1 0 0
chr19:49200379|49200660 hsa-miR-1914-5p 1 0 0
chr19:49200379|49200660 hsa-miR-6886-3p 1 0 0
chr19:49200379|49200660 hsa-miR-5088-3p 1 1 0
chr19:49200379|49200660 hsa-miR-4749-3p 1 0 0
chr19:49200379|49200660 hsa-miR-3151-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6777-3p 1 1 0
chr19:49200379|49200660 hsa-miR-1292-3p 1 1 0
chr19:49200379|49200660 hsa-miR-6794-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6880-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6802-3p 1 1 0
chr19:49200379|49200660 hsa-miR-6883-3p 1 1 0
chr19:49200379|49200660 hsa-miR-204-5p 1 0 0
chr19:49200379|49200660 hsa-miR-1227-3p 1 0 0
chr19:49200379|49200660 hsa-miR-130b-5p 1 0 0
chr19:49200379|49200660 hsa-miR-6748-3p 1 0 0
chr19:49200379|49200660 hsa-miR-1255b-2-3p 1 0 0
chr19:49200379|49200660 hsa-miR-3184-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6851-3p 1 0 0
chr19:49200379|49200660 hsa-miR-4433a-5p 1 1 0
chr19:49200379|49200660 hsa-miR-3173-5p 1 1 0
chr19:49200379|49200660 hsa-miR-4433b-5p 1 0 0
chr19:49200379|49200660 hsa-miR-6734-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6846-3p 1 0 0
chr19:49200379|49200660 hsa-miR-4639-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6780b-3p 1 0 0
chr19:49200379|49200660 hsa-miR-642a-5p 1 0 0
chr19:49200379|49200660 hsa-miR-6800-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6890-3p 1 0 0
chr19:49200379|49200660 hsa-miR-3162-3p 1 0 0
chr19:49200379|49200660 hsa-miR-18b-3p 1 0 0
chr19:49200379|49200660 hsa-miR-4740-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6763-5p 0 1 0
chr19:49200379|49200660 hsa-miR-3127-3p 1 1 0
chr19:49200379|49200660 hsa-miR-320a-5p 1 1 0
chr19:49200379|49200660 hsa-miR-4685-3p 1 1 0
chr19:49200379|49200660 hsa-miR-6866-3p 1 1 0
chr19:49200379|49200660 hsa-miR-4745-3p 1 0 0
chr19:49200379|49200660 hsa-miR-1271-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6791-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6877-3p 1 0 0
chr19:49200379|49200660 hsa-miR-324-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6724-5p 1 0 0
chr19:49200379|49200660 hsa-miR-10398-5p 1 0 0
chr19:49200379|49200660 hsa-miR-2682-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6753-3p 1 0 0
chr19:49200379|49200660 hsa-miR-4722-3p 1 0 0
chr19:49200379|49200660 hsa-miR-4757-5p 1 0 0
chr19:49200379|49200660 hsa-miR-193b-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6511a-3p 0 1 0
chr19:49200379|49200660 hsa-miR-6756-3p 1 1 0
chr19:49200379|49200660 hsa-miR-6784-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6792-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6862-3p 1 0 0
chr19:49200379|49200660 hsa-miR-10401-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6801-3p 1 1 0
chr19:49200379|49200660 hsa-miR-6805-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6810-3p 1 1 0
chr19:49200379|49200660 hsa-miR-6775-3p 1 1 0
chr19:49200379|49200660 hsa-miR-10392-3p 1 1 0
chr19:49200379|49200660 hsa-miR-4723-3p 1 1 0
chr19:49200379|49200660 hsa-miR-483-3p 1 1 0
chr19:49200379|49200660 hsa-miR-6511b-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6769b-3p 1 1 0
chr19:49200379|49200660 hsa-miR-6819-3p 1 0 0
chr19:49200379|49200660 hsa-miR-7114-3p 1 0 0
chr19:49200379|49200660 hsa-miR-3085-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6859-5p 0 1 0
chr19:49200379|49200660 hsa-miR-330-5p 1 0 0
chr19:49200379|49200660 hsa-miR-6744-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6783-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6781-3p 1 1 0
chr19:49200379|49200660 hsa-miR-5006-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6827-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6824-3p 1 0 0
chr19:49200379|49200660 hsa-miR-6834-3p 0 1 0
chr19:49200379|49200660 hsa-miR-1912-3p 1 0 0
chr19:49200379|49200660 hsa-miR-519e-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr19:49200379|49200660
ORF Type ORF1
Protein Length 39
Nucleotide Length 120
Protein Sequence MGPKIVIVSKMVRQGRGQSGRGHRERGGAREGVVRGEGA
Nucleotide Sequence CTGGGGCCCAAGATCGTCATCGTGAGCAAGATGGTGAGGCAGGGGCGGGGCCAAAGTGGGCGGGGACATAGGGAAAGGGGTGGGGCCAGGGAGGGAGTGGTCCGTGGAGAAGGGGCGTGA
CircID chr19:49200379|49200660
ORF Type ORF2
Protein Length 38
Nucleotide Length 114
Protein Sequence MGYRGGARVGKGGARLSHISPQMKDVFFFLFFLGVWLV
Nucleotide Sequence TTGGGATATAGGGGTGGGGCCAGAGTAGGAAAGGGCGGGGCCAGACTCAGCCACATCTCCCCACAGATGAAGGACGTGTTCTTCTTCCTCTTCTTCCTCGGCGTGTGGCTGGTA
CircID chr19:49200379|49200660
ORF Type ORF3
Protein Length 74
Nucleotide Length 222
Protein Sequence MWLSLAPPFPTLAPPLYPKNTPHCSPKSRPFSTDHSLPGPTPFPMSPPTLAPPLPHHLAHDDDLGPQLFVDRED
Nucleotide Sequence ATGTGGCTGAGTCTGGCCCCGCCCTTTCCTACTCTGGCCCCACCCCTATATCCCAAAAACACGCCCCATTGCTCCCCAAAGTCACGCCCCTTCTCCACGGACCACTCCCTCCCTGGCCCCACCCCTTTCCCTATGTCCCCGCCCACTTTGGCCCCGCCCCTGCCTCACCATCTTGCTCACGATGACGATCTTGGGCCCCAGCTGTTTGTTGACCGTGAAGAT
CircID chr19:49200379|49200660
ORF Type ORF4
Protein Length 36
Nucleotide Length 108
Protein Sequence MAPPLSLCPRPLWPRPCLTILLTMTILGPSCLLTVK
Nucleotide Sequence CTGGCCCCACCCCTTTCCCTATGTCCCCGCCCACTTTGGCCCCGCCCCTGCCTCACCATCTTGCTCACGATGACGATCTTGGGCCCCAGCTGTTTGTTGACCGTGAAG
CircID chr19:49200379|49200660
ORF Type ORF5
Protein Length 64
Nucleotide Length 195
Protein Sequence MWGDVAESGPALSYSGPTPISQKHAPLLPKVTPLLHGPLPPWPHPFPYVPAHFGPAPASPSCSR
Nucleotide Sequence CTGTGGGGAGATGTGGCTGAGTCTGGCCCCGCCCTTTCCTACTCTGGCCCCACCCCTATATCCCAAAAACACGCCCCATTGCTCCCCAAAGTCACGCCCCTTCTCCACGGACCACTCCCTCCCTGGCCCCACCCCTTTCCCTATGTCCCCGCCCACTTTGGCCCCGCCCCTGCCTCACCATCTTGCTCACGATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab