CircRNA Information

General Information
circRNA Basic Information
CircID chr19:49210231|49210379
Strand +
CircType exon
Host Gene ENSG00000130529.14;
Algorism CIRI2;
Sequence GGCTGGGGGCTCCGGGGTCGCCTGCACAATTGCCTGAGCAGGAGGCGCAAGTGGGAGATGACGATAAAGGGCGGGGCCAGCGCGGGCCGAGAGTGGAATTCCCGGATGAGGCGGTAACGCTGCGCCTTCCAGTAGAGATCGCTGTTGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:49210231|49210379 hsa-miR-150-5p 0 0 1
chr19:49210231|49210379 hsa-miR-150-3p 0 0 1
chr19:49210231|49210379 hsa-miR-370-5p 0 0 1
chr19:49210231|49210379 hsa-miR-370-3p 0 0 1
chr19:49210231|49210379 hsa-miR-1203 0 0 1
chr19:49210231|49210379 hsa-miR-1243 0 0 1
chr19:49210231|49210379 hsa-miR-1249-5p 0 0 1
chr19:49210231|49210379 hsa-miR-1249-3p 0 0 1
chr19:49210231|49210379 hsa-miR-1281 0 1 1
chr19:49210231|49210379 hsa-miR-1307-5p 0 0 1
chr19:49210231|49210379 hsa-miR-1307-3p 0 0 1
chr19:49210231|49210379 hsa-miR-1225-3p 0 0 1
chr19:49210231|49210379 hsa-miR-532-3p 0 0 1
chr19:49210231|49210379 hsa-miR-361-3p 0 0 1
chr19:49210231|49210379 hsa-miR-767-3p 0 0 1
chr19:49210231|49210379 hsa-miR-524-3p 0 0 1
chr19:49210231|49210379 hsa-miR-525-3p 0 0 1
chr19:49210231|49210379 hsa-miR-572 1 0 0
chr19:49210231|49210379 hsa-miR-636 1 0 0
chr19:49210231|49210379 hsa-miR-663b 1 0 0
chr19:49210231|49210379 hsa-miR-1469 1 0 0
chr19:49210231|49210379 hsa-miR-1538 1 0 0
chr19:49210231|49210379 hsa-miR-1539 1 0 0
chr19:49210231|49210379 hsa-miR-1913 1 0 0
chr19:49210231|49210379 hsa-miR-4268 1 0 0
chr19:49210231|49210379 hsa-miR-3615 1 1 0
chr19:49210231|49210379 hsa-miR-3943 0 1 0
chr19:49210231|49210379 hsa-miR-4642 1 0 0
chr19:49210231|49210379 hsa-miR-4767 1 0 0
chr19:49210231|49210379 hsa-miR-7703 1 0 0
chr19:49210231|49210379 hsa-miR-18a-3p 1 0 0
chr19:49210231|49210379 hsa-miR-4665-3p 1 0 0
chr19:49210231|49210379 hsa-miR-6836-3p 1 0 0
chr19:49210231|49210379 hsa-miR-149-5p 1 0 0
chr19:49210231|49210379 hsa-miR-6720-5p 1 0 0
chr19:49210231|49210379 hsa-miR-210-5p 1 0 0
chr19:49210231|49210379 hsa-miR-191-3p 1 0 0
chr19:49210231|49210379 hsa-miR-3189-5p 1 0 0
chr19:49210231|49210379 hsa-miR-6726-3p 1 0 0
chr19:49210231|49210379 hsa-miR-6832-3p 1 0 0
chr19:49210231|49210379 hsa-miR-423-3p 1 0 0
chr19:49210231|49210379 hsa-miR-4725-5p 1 0 0
chr19:49210231|49210379 hsa-miR-4713-5p 1 1 0
chr19:49210231|49210379 hsa-miR-4436b-5p 1 1 0
chr19:49210231|49210379 hsa-miR-3934-3p 0 1 0
chr19:49210231|49210379 hsa-miR-4763-5p 1 0 0
chr19:49210231|49210379 hsa-miR-7108-3p 1 0 0
chr19:49210231|49210379 hsa-miR-1247-5p 1 0 0
chr19:49210231|49210379 hsa-miR-4707-3p 1 0 0
chr19:49210231|49210379 hsa-miR-3944-3p 1 0 0
chr19:49210231|49210379 hsa-miR-6803-3p 1 0 0
chr19:49210231|49210379 hsa-miR-6878-3p 1 0 0
chr19:49210231|49210379 hsa-miR-425-3p 1 0 0
chr19:49210231|49210379 hsa-miR-6825-3p 1 0 0
chr19:49210231|49210379 hsa-miR-3190-5p 1 0 0
chr19:49210231|49210379 hsa-miR-6743-3p 1 0 0
chr19:49210231|49210379 hsa-miR-4758-3p 1 0 0
chr19:49210231|49210379 hsa-miR-6752-3p 1 0 0
chr19:49210231|49210379 hsa-miR-6782-3p 1 0 0
chr19:49210231|49210379 hsa-miR-4632-3p 1 0 0
chr19:49210231|49210379 hsa-miR-6886-3p 1 0 0
chr19:49210231|49210379 hsa-miR-4749-3p 1 0 0
chr19:49210231|49210379 hsa-miR-328-3p 1 0 0
chr19:49210231|49210379 hsa-miR-6777-3p 1 1 0
chr19:49210231|49210379 hsa-miR-2277-5p 1 0 0
chr19:49210231|49210379 hsa-miR-6880-3p 1 0 0
chr19:49210231|49210379 hsa-miR-6851-3p 1 0 0
chr19:49210231|49210379 hsa-miR-4433a-5p 1 0 0
chr19:49210231|49210379 hsa-miR-3173-5p 1 0 0
chr19:49210231|49210379 hsa-miR-4639-3p 0 1 0
chr19:49210231|49210379 hsa-miR-3156-3p 0 1 0
chr19:49210231|49210379 hsa-miR-4745-3p 1 0 0
chr19:49210231|49210379 hsa-miR-6511b-5p 0 1 0
chr19:49210231|49210379 hsa-miR-10396a-3p 1 0 0
chr19:49210231|49210379 hsa-miR-6799-3p 1 0 0
chr19:49210231|49210379 hsa-miR-6791-3p 1 1 0
chr19:49210231|49210379 hsa-miR-6724-5p 1 0 0
chr19:49210231|49210379 hsa-miR-2682-3p 1 0 0
chr19:49210231|49210379 hsa-miR-6792-3p 1 0 0
chr19:49210231|49210379 hsa-miR-10401-3p 1 0 0
chr19:49210231|49210379 hsa-miR-6801-3p 1 0 0
chr19:49210231|49210379 hsa-miR-6829-3p 1 0 0
chr19:49210231|49210379 hsa-miR-6775-3p 1 0 0
chr19:49210231|49210379 hsa-miR-10392-3p 1 0 0
chr19:49210231|49210379 hsa-miR-330-5p 1 0 0
chr19:49210231|49210379 hsa-miR-6744-3p 1 0 0
chr19:49210231|49210379 hsa-miR-33b-3p 1 0 0
chr19:49210231|49210379 hsa-miR-3922-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr19:49210231|49210379
ORF Type ORF1
Protein Length 31
Nucleotide Length 96
Protein Sequence MHNCLSRRRKWEMTIKGGASAGREWNSRMRR
Nucleotide Sequence CTGCACAATTGCCTGAGCAGGAGGCGCAAGTGGGAGATGACGATAAAGGGCGGGGCCAGCGCGGGCCGAGAGTGGAATTCCCGGATGAGGCGGTAA
CircID chr19:49210231|49210379
ORF Type ORF2
Protein Length 49
Nucleotide Length 147
Protein Sequence LGAPGSPAQLPEQEAQVGDDDKGRGQRGPRVEFPDEAVTLRLPVEIAVA
Nucleotide Sequence CTGGGGGCTCCGGGGTCGCCTGCACAATTGCCTGAGCAGGAGGCGCAAGTGGGAGATGACGATAAAGGGCGGGGCCAGCGCGGGCCGAGAGTGGAATTCCCGGATGAGGCGGTAACGCTGCGCCTTCCAGTAGAGATCGCTGTTGCC
CircID chr19:49210231|49210379
ORF Type ORF3
Protein Length 26
Nucleotide Length 78
Protein Sequence MAPPFIVISHLRLLLRQLCRRPRSPQ
Nucleotide Sequence CTGGCCCCGCCCTTTATCGTCATCTCCCACTTGCGCCTCCTGCTCAGGCAATTGTGCAGGCGACCCCGGAGCCCCCAG
CircID chr19:49210231|49210379
ORF Type ORF4
Protein Length 44
Nucleotide Length 132
Protein Sequence MEGAALPPHPGIPLSARAGPALYRHLPLAPPAQAIVQATPEPPA
Nucleotide Sequence CTGGAAGGCGCAGCGTTACCGCCTCATCCGGGAATTCCACTCTCGGCCCGCGCTGGCCCCGCCCTTTATCGTCATCTCCCACTTGCGCCTCCTGCTCAGGCAATTGTGCAGGCGACCCCGGAGCCCCCAGCC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab