CircRNA Information

General Information
circRNA Basic Information
CircID chr19:49491805|49491923
Strand -
CircType exon
Host Gene ENSG00000142541.15;
Algorism CIRI2;
Sequence TCCTGGTCTGAGCCCAATAAAGACTGTTAATTCCTCATGCGTTGCCTGCCCTTCCTCCATTGTTGCCCTGGAATGTACGGGACCCAGGGGCAGCAGCAGTCCAGGTGCCACAGGCAGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:49491805|49491923 hsa-miR-181c-5p 0 0 1
chr19:49491805|49491923 hsa-miR-181c-3p 0 0 1
chr19:49491805|49491923 hsa-miR-212-5p 0 0 1
chr19:49491805|49491923 hsa-miR-212-3p 0 0 1
chr19:49491805|49491923 hsa-miR-132-5p 0 0 1
chr19:49491805|49491923 hsa-miR-132-3p 0 0 1
chr19:49491805|49491923 hsa-miR-422a 0 0 1
chr19:49491805|49491923 hsa-miR-181d-5p 0 0 1
chr19:49491805|49491923 hsa-miR-181d-3p 0 0 1
chr19:49491805|49491923 hsa-miR-619-5p 0 0 1
chr19:49491805|49491923 hsa-miR-619-3p 0 0 1
chr19:49491805|49491923 hsa-miR-765 1 0 1
chr19:49491805|49491923 hsa-miR-1288-5p 0 0 1
chr19:49491805|49491923 hsa-miR-1288-3p 0 0 1
chr19:49491805|49491923 hsa-miR-331-3p 0 1 1
chr19:49491805|49491923 hsa-miR-324-3p 0 0 1
chr19:49491805|49491923 hsa-miR-378 0 0 1
chr19:49491805|49491923 hsa-miR-1269 0 0 1
chr19:49491805|49491923 hsa-miR-181a 0 0 1
chr19:49491805|49491923 hsa-miR-181b 0 0 1
chr19:49491805|49491923 hsa-miR-24 0 0 1
chr19:49491805|49491923 hsa-miR-661 0 1 0
chr19:49491805|49491923 hsa-miR-658 1 0 0
chr19:49491805|49491923 hsa-miR-760 1 0 0
chr19:49491805|49491923 hsa-miR-1269a 0 1 0
chr19:49491805|49491923 hsa-miR-3141 1 0 0
chr19:49491805|49491923 hsa-miR-4281 1 0 0
chr19:49491805|49491923 hsa-miR-3915 1 1 0
chr19:49491805|49491923 hsa-miR-4448 1 0 0
chr19:49491805|49491923 hsa-miR-4449 1 0 0
chr19:49491805|49491923 hsa-miR-378h 0 1 0
chr19:49491805|49491923 hsa-miR-4498 1 0 0
chr19:49491805|49491923 hsa-miR-1269b 0 1 0
chr19:49491805|49491923 hsa-miR-4534 1 1 0
chr19:49491805|49491923 hsa-miR-4674 0 1 0
chr19:49491805|49491923 hsa-miR-4688 1 0 0
chr19:49491805|49491923 hsa-miR-4689 1 0 0
chr19:49491805|49491923 hsa-miR-4692 1 0 0
chr19:49491805|49491923 hsa-miR-4739 1 0 0
chr19:49491805|49491923 hsa-miR-5090 1 0 0
chr19:49491805|49491923 hsa-miR-5093 1 0 0
chr19:49491805|49491923 hsa-miR-6133 1 0 0
chr19:49491805|49491923 hsa-miR-12115 1 0 0
chr19:49491805|49491923 hsa-miR-6894-5p 1 0 0
chr19:49491805|49491923 hsa-miR-6857-5p 1 0 0
chr19:49491805|49491923 hsa-miR-210-5p 0 1 0
chr19:49491805|49491923 hsa-miR-766-5p 1 0 0
chr19:49491805|49491923 hsa-miR-6880-5p 1 0 0
chr19:49491805|49491923 hsa-miR-7847-3p 1 0 0
chr19:49491805|49491923 hsa-miR-4653-3p 1 0 0
chr19:49491805|49491923 hsa-miR-6890-5p 1 0 0
chr19:49491805|49491923 hsa-miR-24-3p 0 1 0
chr19:49491805|49491923 hsa-miR-6762-3p 0 1 0
chr19:49491805|49491923 hsa-miR-6806-5p 1 0 0
chr19:49491805|49491923 hsa-miR-6721-5p 1 0 0
chr19:49491805|49491923 hsa-miR-23a-5p 1 0 0
chr19:49491805|49491923 hsa-miR-6798-5p 1 0 0
chr19:49491805|49491923 hsa-miR-6765-3p 0 1 0
chr19:49491805|49491923 hsa-miR-6882-3p 0 1 0
chr19:49491805|49491923 hsa-miR-1343-3p 0 1 0
chr19:49491805|49491923 hsa-miR-939-3p 0 1 0
chr19:49491805|49491923 hsa-miR-1226-5p 1 0 0
chr19:49491805|49491923 hsa-miR-1229-5p 1 0 0
chr19:49491805|49491923 hsa-miR-885-3p 1 0 0
chr19:49491805|49491923 hsa-miR-4446-3p 1 0 0
chr19:49491805|49491923 hsa-miR-149-3p 1 0 0
chr19:49491805|49491923 hsa-miR-193a-5p 1 0 0
chr19:49491805|49491923 hsa-miR-5010-5p 1 0 0
chr19:49491805|49491923 hsa-miR-7112-5p 1 0 0
chr19:49491805|49491923 hsa-miR-423-5p 1 0 0
chr19:49491805|49491923 hsa-miR-4742-5p 0 1 0
chr19:49491805|49491923 hsa-miR-891a-3p 0 1 0
chr19:49491805|49491923 hsa-miR-4529-3p 0 1 0
chr19:49491805|49491923 hsa-miR-1207-5p 1 0 0
chr19:49491805|49491923 hsa-miR-1233-5p 1 0 0
chr19:49491805|49491923 hsa-miR-4763-3p 1 0 0
chr19:49491805|49491923 hsa-miR-6775-5p 1 1 0
chr19:49491805|49491923 hsa-miR-6743-5p 1 1 0
chr19:49491805|49491923 hsa-miR-6754-5p 1 0 0
chr19:49491805|49491923 hsa-miR-11181-3p 1 0 0
chr19:49491805|49491923 hsa-miR-1249-5p 1 0 0
chr19:49491805|49491923 hsa-miR-6779-5p 1 0 0
chr19:49491805|49491923 hsa-miR-6780a-5p 1 0 0
chr19:49491805|49491923 hsa-miR-6797-5p 1 0 0
chr19:49491805|49491923 hsa-miR-6879-5p 1 1 0
chr19:49491805|49491923 hsa-miR-7111-5p 1 0 0
chr19:49491805|49491923 hsa-miR-1915-3p 1 0 0
chr19:49491805|49491923 hsa-miR-4728-5p 1 0 0
chr19:49491805|49491923 hsa-miR-5196-5p 1 0 0
chr19:49491805|49491923 hsa-miR-6780b-5p 1 0 0
chr19:49491805|49491923 hsa-miR-328-5p 1 0 0
chr19:49491805|49491923 hsa-miR-4632-5p 1 1 0
chr19:49491805|49491923 hsa-miR-4685-5p 1 1 0
chr19:49491805|49491923 hsa-miR-6735-5p 1 1 0
chr19:49491805|49491923 hsa-miR-6858-5p 1 0 0
chr19:49491805|49491923 hsa-miR-6883-5p 1 0 0
chr19:49491805|49491923 hsa-miR-4436b-3p 0 1 0
chr19:49491805|49491923 hsa-miR-6511b-5p 1 0 0
chr19:49491805|49491923 hsa-miR-3173-3p 1 0 0
chr19:49491805|49491923 hsa-miR-4747-5p 1 0 0
chr19:49491805|49491923 hsa-miR-6876-5p 1 1 0
chr19:49491805|49491923 hsa-miR-6785-5p 1 0 0
chr19:49491805|49491923 hsa-miR-6791-5p 1 0 0
chr19:49491805|49491923 hsa-miR-10400-3p 0 1 0
chr19:49491805|49491923 hsa-miR-6837-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr19:49491805|49491923
ORF Type ORF1
Protein Length 27
Nucleotide Length 81
Protein Sequence MRCLPFLHCCPGMYGTQGQQQSRCHRQ
Nucleotide Sequence ATGCGTTGCCTGCCCTTCCTCCATTGTTGCCCTGGAATGTACGGGACCCAGGGGCAGCAGCAGTCCAGGTGCCACAGGCAG

CircID chr19:49491805|49491923
ORF Type ORF2
Protein Length 37
Nucleotide Length 111
Protein Sequence MSPIKTVNSSCVACPSSIVALECTGPRGSSSPGATGS
Nucleotide Sequence CTGAGCCCAATAAAGACTGTTAATTCCTCATGCGTTGCCTGCCCTTCCTCCATTGTTGCCCTGGAATGTACGGGACCCAGGGGCAGCAGCAGTCCAGGTGCCACAGGCAGC

CircID chr19:49491805|49491923
ORF Type ORF3
Protein Length 32
Nucleotide Length 96
Protein Sequence MLIPHALPALPPLLPWNVRDPGAAAVQVPQAA
Nucleotide Sequence CTGTTAATTCCTCATGCGTTGCCTGCCCTTCCTCCATTGTTGCCCTGGAATGTACGGGACCCAGGGGCAGCAGCAGTCCAGGTGCCACAGGCAGCC

CircID chr19:49491805|49491923
ORF Type ORF4
Protein Length 28
Nucleotide Length 87
Protein Sequence MWHLDCCCPWVPYIPGQQWRKGRQRMRN
Nucleotide Sequence CTGTGGCACCTGGACTGCTGCTGCCCCTGGGTCCCGTACATTCCAGGGCAACAATGGAGGAAGGGCAGGCAACGCATGAGGAATTAA

CircID chr19:49491805|49491923
ORF Type ORF5
Protein Length 39
Nucleotide Length 117
Protein Sequence LPVAPGLLLPLGPVHSRATMEEGQATHEELTVFIGLRPG
Nucleotide Sequence CTGCCTGTGGCACCTGGACTGCTGCTGCCCCTGGGTCCCGTACATTCCAGGGCAACAATGGAGGAAGGGCAGGCAACGCATGAGGAATTAACAGTCTTTATTGGGCTCAGACCAGGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites