CircNet

General Information

circRNA Basic Information

CircID	chr19:49681910\|49682259
Strand	+
CircType	exon
Host Gene	ENSG00000126457.21;
Algorism	find_circ;CIRI2;DCC;
Sequence	GAGATGCTGAAGGACGAGGTGCGCACCCTCACTTACCGCAACTCCATGTTTCATAACCGGCACCTCTTCAAGGACAAGGTGGTGCTGGACGTCGGCTCGGGCACCGGCATCCTCTGCATGTTTGCTGCCAAGGCCGGGGCCCGCAAGGTCATCGGGCCCATCAGGGCTCAGGGATTGGATGGAGGTGATGGGGGCAGGGGATGGGTCTCACCCTCCCTTCTTCCTGGGCCCTCAGATCGAGTGTTCCAGTATCTCTGATTATGCGGTGAAGATCGTCAAAGCCAACAAGTTAGACCACG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:49681910\|49682259	hsa-miR-212-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:49681910\|49682259
ORF Type	ORF1
Protein Length	85
Nucleotide Length	255
Protein Sequence	MLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGPIRAQGLDGGDGGRGWVSPSLLPGPSDRVFQYL*
Nucleotide Sequence	ATGCTGAAGGACGAGGTGCGCACCCTCACTTACCGCAACTCCATGTTTCATAACCGGCACCTCTTCAAGGACAAGGTGGTGCTGGACGTCGGCTCGGGCACCGGCATCCTCTGCATGTTTGCTGCCAAGGCCGGGGCCCGCAAGGTCATCGGGCCCATCAGGGCTCAGGGATTGGATGGAGGTGATGGGGGCAGGGGATGGGTCTCACCCTCCCTTCTTCCTGGGCCCTCAGATCGAGTGTTCCAGTATCTCTGA

CircID	chr19:49681910\|49682259
ORF Type	ORF2
Protein Length	40
Nucleotide Length	120
Protein Sequence	MEVMGAGDGSHPPFFLGPQIECSSISDYAVKIVKANKLDH
Nucleotide Sequence	ATGGAGGTGATGGGGGCAGGGGATGGGTCTCACCCTCCCTTCTTCCTGGGCCCTCAGATCGAGTGTTCCAGTATCTCTGATTATGCGGTGAAGATCGTCAAAGCCAACAAGTTAGACCAC

CircID	chr19:49681910\|49682259
ORF Type	ORF3
Protein Length	37
Nucleotide Length	111
Protein Sequence	MGPMTLRAPALAANMQRMPVPEPTSSTTLSLKRCRL*
Nucleotide Sequence	ATGGGCCCGATGACCTTGCGGGCCCCGGCCTTGGCAGCAAACATGCAGAGGATGCCGGTGCCCGAGCCGACGTCCAGCACCACCTTGTCCTTGAAGAGGTGCCGGTTATGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr19:49681910\|49682259	U2AF2	5	1	1
chr19:49681910\|49682259	ELAVL1	1	0	3
chr19:49681910\|49682259	DHX9	0	0	1
chr19:49681910\|49682259	SF3B4	0	0	2
chr19:49681910\|49682259	KHDRBS1	1	0	0
chr19:49681910\|49682259	SF3A3	1	0	0
chr19:49681910\|49682259	CNBP	0	0	1
chr19:49681910\|49682259	YTHDF1	0	0	1
chr19:49681910\|49682259	UPF1	0	1	0
chr19:49681910\|49682259	TAF15	0	2	0
chr19:49681910\|49682259	CAPRIN1	0	0	1
chr19:49681910\|49682259	FMR1	2	1	8
chr19:49681910\|49682259	CPSF6	1	0	0
chr19:49681910\|49682259	TROVE2	0	0	1
chr19:49681910\|49682259	AGO2	1	1	8
chr19:49681910\|49682259	GNL3	0	1	2
chr19:49681910\|49682259	DGCR8	1	0	1
chr19:49681910\|49682259	SRSF7	1	1	0
chr19:49681910\|49682259	SRSF1	1	1	4
chr19:49681910\|49682259	NOP58	2	1	4
chr19:49681910\|49682259	NOP56	1	0	1
chr19:49681910\|49682259	DDX54	0	0	8
chr19:49681910\|49682259	HNRNPA2B1	0	0	2
chr19:49681910\|49682259	MSI2	0	0	3
chr19:49681910\|49682259	PTBP1	1	1	1
chr19:49681910\|49682259	HNRNPC	3	5	0
chr19:49681910\|49682259	TRA2A	0	1	2
chr19:49681910\|49682259	ZNF184	1	0	1
chr19:49681910\|49682259	DDX3X	2	0	5
chr19:49681910\|49682259	LARP4B	0	0	1
chr19:49681910\|49682259	SMNDC1	1	0	0
chr19:49681910\|49682259	AUH	0	0	1
chr19:49681910\|49682259	ACIN1	0	0	2
chr19:49681910\|49682259	LIN28B	3	2	5
chr19:49681910\|49682259	RANGAP1	0	0	3
chr19:49681910\|49682259	FXR1	1	0	1
chr19:49681910\|49682259	FXR2	1	0	2
chr19:49681910\|49682259	SND1	2	1	3
chr19:49681910\|49682259	IGF2BP1	2	2	5
chr19:49681910\|49682259	BUD13	0	0	1
chr19:49681910\|49682259	IGF2BP3	1	0	2
chr19:49681910\|49682259	IGF2BP2	1	0	9
chr19:49681910\|49682259	NPM1	0	0	1
chr19:49681910\|49682259	TARDBP	2	0	3
chr19:49681910\|49682259	ALKBH5	0	0	1
chr19:49681910\|49682259	DICER1	0	0	2
chr19:49681910\|49682259	RBFOX2	1	0	1
chr19:49681910\|49682259	RTCB	0	0	1
chr19:49681910\|49682259	CSTF2T	0	0	2
chr19:49681910\|49682259	FUS	0	1	0
chr19:49681910\|49682259	RBM27	1	1	0
chr19:49681910\|49682259	ILF3	1	0	0
chr19:49681910\|49682259	AIFM1	0	0	1
chr19:49681910\|49682259	AGO1	0	0	2
chr19:49681910\|49682259	EIF4A3	3	1	4
chr19:49681910\|49682259	FBL	2	0	3

CircRNA Information