CircRNA Information

General Information
circRNA Basic Information
CircID chr19:49803367|49803598
Strand -
CircType exon
Host Gene ENSG00000196961.11;
Algorism CIRI2;
Sequence CTCCAGACTCATATCCTCTCAGGCCCGGCCCAGCCTCCTGCCTCTCCACGTCGGCCTTCCTCACCGTGGGGAAGCCGGCTGACCCAGGTCCACACTTCTCTTCAGCCTCTCTTGGGCACGCAATTAGTTCTCTGAGATTGAGTGTCTGCATCTGTTAAGATGGGGGTGGGATTCCTTCCCCCAGGACAGGGGATGACAGTGAAGTGGTGTGTGGGAGGCTTTACTTCCAGAA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:49803367|49803598 hsa-miR-216a-5p 0 0 1
chr19:49803367|49803598 hsa-miR-216a-3p 0 0 1
chr19:49803367|49803598 hsa-miR-146a-5p 0 0 1
chr19:49803367|49803598 hsa-miR-146a-3p 0 0 1
chr19:49803367|49803598 hsa-miR-185-5p 0 0 1
chr19:49803367|49803598 hsa-miR-185-3p 0 0 1
chr19:49803367|49803598 hsa-miR-492 0 0 1
chr19:49803367|49803598 hsa-miR-595 0 0 1
chr19:49803367|49803598 hsa-miR-625-5p 0 0 1
chr19:49803367|49803598 hsa-miR-625-3p 0 0 1
chr19:49803367|49803598 hsa-miR-627-5p 0 0 1
chr19:49803367|49803598 hsa-miR-627-3p 0 0 1
chr19:49803367|49803598 hsa-miR-631 0 1 1
chr19:49803367|49803598 hsa-miR-637 1 0 1
chr19:49803367|49803598 hsa-miR-924 0 0 1
chr19:49803367|49803598 hsa-miR-940 0 0 1
chr19:49803367|49803598 hsa-miR-1208 0 0 1
chr19:49803367|49803598 hsa-miR-1299 0 0 1
chr19:49803367|49803598 hsa-miR-1275 0 0 1
chr19:49803367|49803598 hsa-miR-302f 0 0 1
chr19:49803367|49803598 hsa-miR-1252-5p 0 0 1
chr19:49803367|49803598 hsa-miR-1252-3p 0 0 1
chr19:49803367|49803598 hsa-miR-1827 0 1 1
chr19:49803367|49803598 hsa-miR-532-3p 0 1 1
chr19:49803367|49803598 hsa-miR-485-5p 1 1 1
chr19:49803367|49803598 hsa-miR-339-5p 0 1 1
chr19:49803367|49803598 hsa-miR-1224-3p 0 0 1
chr19:49803367|49803598 hsa-miR-331-3p 0 0 1
chr19:49803367|49803598 hsa-miR-188-3p 0 0 1
chr19:49803367|49803598 hsa-miR-875-3p 0 0 1
chr19:49803367|49803598 hsa-miR-146b-5p 0 0 1
chr19:49803367|49803598 hsa-miR-362-3p 0 0 1
chr19:49803367|49803598 hsa-miR-1260 0 0 1
chr19:49803367|49803598 hsa-miR-1280 0 0 1
chr19:49803367|49803598 hsa-miR-516b 0 0 1
chr19:49803367|49803598 hsa-miR-329 0 0 1
chr19:49803367|49803598 hsa-miR-1185 0 0 1
chr19:49803367|49803598 hsa-miR-610 1 1 0
chr19:49803367|49803598 hsa-miR-612 1 0 0
chr19:49803367|49803598 hsa-miR-663a 1 0 0
chr19:49803367|49803598 hsa-miR-762 1 1 0
chr19:49803367|49803598 hsa-miR-665 1 1 0
chr19:49803367|49803598 hsa-miR-1260a 0 1 0
chr19:49803367|49803598 hsa-miR-1268a 1 0 0
chr19:49803367|49803598 hsa-miR-2861 1 1 0
chr19:49803367|49803598 hsa-miR-3125 1 0 0
chr19:49803367|49803598 hsa-miR-3147 1 0 0
chr19:49803367|49803598 hsa-miR-3188 1 0 0
chr19:49803367|49803598 hsa-miR-3195 1 0 0
chr19:49803367|49803598 hsa-miR-3196 1 0 0
chr19:49803367|49803598 hsa-miR-3652 1 0 0
chr19:49803367|49803598 hsa-miR-3661 0 1 0
chr19:49803367|49803598 hsa-miR-3911 0 1 0
chr19:49803367|49803598 hsa-miR-3929 0 1 0
chr19:49803367|49803598 hsa-miR-1268b 1 0 0
chr19:49803367|49803598 hsa-miR-4421 0 1 0
chr19:49803367|49803598 hsa-miR-4436a 1 0 0
chr19:49803367|49803598 hsa-miR-4478 0 1 0
chr19:49803367|49803598 hsa-miR-4492 1 0 0
chr19:49803367|49803598 hsa-miR-4498 1 0 0
chr19:49803367|49803598 hsa-miR-4505 1 1 0
chr19:49803367|49803598 hsa-miR-4508 1 0 0
chr19:49803367|49803598 hsa-miR-4533 1 0 0
chr19:49803367|49803598 hsa-miR-4535 0 1 0
chr19:49803367|49803598 hsa-miR-1587 1 0 0
chr19:49803367|49803598 hsa-miR-4656 1 0 0
chr19:49803367|49803598 hsa-miR-4657 1 0 0
chr19:49803367|49803598 hsa-miR-4688 1 0 0
chr19:49803367|49803598 hsa-miR-4689 1 0 0
chr19:49803367|49803598 hsa-miR-4706 1 0 0
chr19:49803367|49803598 hsa-miR-4710 0 1 0
chr19:49803367|49803598 hsa-miR-4736 1 0 0
chr19:49803367|49803598 hsa-miR-4739 1 1 0
chr19:49803367|49803598 hsa-miR-4754 1 1 0
chr19:49803367|49803598 hsa-miR-5090 1 0 0
chr19:49803367|49803598 hsa-miR-5683 0 1 0
chr19:49803367|49803598 hsa-miR-5787 1 1 0
chr19:49803367|49803598 hsa-miR-6085 1 0 0
chr19:49803367|49803598 hsa-miR-6086 1 0 0
chr19:49803367|49803598 hsa-miR-6125 1 0 0
chr19:49803367|49803598 hsa-miR-6133 1 0 0
chr19:49803367|49803598 hsa-miR-6165 1 0 0
chr19:49803367|49803598 hsa-miR-6860 1 0 0
chr19:49803367|49803598 hsa-miR-8072 1 0 0
chr19:49803367|49803598 hsa-miR-12127 1 0 0
chr19:49803367|49803598 hsa-miR-6734-5p 0 1 0
chr19:49803367|49803598 hsa-miR-4731-5p 1 0 0
chr19:49803367|49803598 hsa-miR-1273h-3p 0 1 0
chr19:49803367|49803598 hsa-miR-4433a-3p 1 0 0
chr19:49803367|49803598 hsa-miR-6765-5p 1 0 0
chr19:49803367|49803598 hsa-miR-671-5p 1 0 0
chr19:49803367|49803598 hsa-miR-215-3p 0 1 0
chr19:49803367|49803598 hsa-miR-3150a-3p 1 0 0
chr19:49803367|49803598 hsa-miR-6894-5p 1 0 0
chr19:49803367|49803598 hsa-miR-125a-3p 1 0 0
chr19:49803367|49803598 hsa-miR-7851-3p 1 0 0
chr19:49803367|49803598 hsa-miR-7114-5p 1 0 0
chr19:49803367|49803598 hsa-miR-6089 1 1 0
chr19:49803367|49803598 hsa-miR-7847-3p 1 0 0
chr19:49803367|49803598 hsa-miR-4695-5p 1 1 0
chr19:49803367|49803598 hsa-miR-4709-3p 1 1 0
chr19:49803367|49803598 hsa-miR-4722-5p 1 1 0
chr19:49803367|49803598 hsa-miR-6721-5p 1 0 0
chr19:49803367|49803598 hsa-miR-6805-5p 1 0 0
chr19:49803367|49803598 hsa-miR-2467-5p 1 0 0
chr19:49803367|49803598 hsa-miR-6798-5p 1 1 0
chr19:49803367|49803598 hsa-miR-2467-3p 1 0 0
chr19:49803367|49803598 hsa-miR-7109-3p 0 1 0
chr19:49803367|49803598 hsa-miR-1343-3p 0 1 0
chr19:49803367|49803598 hsa-miR-6786-5p 1 0 0
chr19:49803367|49803598 hsa-miR-7109-5p 0 1 0
chr19:49803367|49803598 hsa-miR-1229-5p 1 0 0
chr19:49803367|49803598 hsa-miR-1228-5p 1 0 0
chr19:49803367|49803598 hsa-miR-6771-5p 1 0 0
chr19:49803367|49803598 hsa-let-7b-5p 1 1 0
chr19:49803367|49803598 hsa-miR-6749-5p 1 1 0
chr19:49803367|49803598 hsa-miR-149-3p 1 0 0
chr19:49803367|49803598 hsa-miR-6717-5p 1 0 0
chr19:49803367|49803598 hsa-miR-3925-5p 0 1 0
chr19:49803367|49803598 hsa-miR-6781-5p 1 0 0
chr19:49803367|49803598 hsa-miR-6877-5p 1 0 0
chr19:49803367|49803598 hsa-miR-423-5p 1 1 0
chr19:49803367|49803598 hsa-let-7i-5p 0 1 0
chr19:49803367|49803598 hsa-let-7c-5p 1 0 0
chr19:49803367|49803598 hsa-let-7e-5p 1 1 0
chr19:49803367|49803598 hsa-miR-6778-3p 0 1 0
chr19:49803367|49803598 hsa-miR-6837-3p 0 1 0
chr19:49803367|49803598 hsa-miR-6760-3p 0 1 0
chr19:49803367|49803598 hsa-miR-188-5p 0 1 0
chr19:49803367|49803598 hsa-miR-1255b-2-3p 0 1 0
chr19:49803367|49803598 hsa-miR-4433a-5p 0 1 0
chr19:49803367|49803598 hsa-miR-7158-5p 1 0 0
chr19:49803367|49803598 hsa-miR-1207-5p 1 1 0
chr19:49803367|49803598 hsa-miR-4763-3p 1 1 0
chr19:49803367|49803598 hsa-miR-6778-5p 1 0 0
chr19:49803367|49803598 hsa-miR-6816-5p 1 0 0
chr19:49803367|49803598 hsa-miR-6893-5p 1 1 0
chr19:49803367|49803598 hsa-miR-5001-5p 1 0 0
chr19:49803367|49803598 hsa-miR-6726-5p 1 0 0
chr19:49803367|49803598 hsa-miR-6737-5p 1 0 0
chr19:49803367|49803598 hsa-miR-6743-5p 1 0 0
chr19:49803367|49803598 hsa-miR-6754-5p 1 0 0
chr19:49803367|49803598 hsa-miR-6756-5p 1 0 0
chr19:49803367|49803598 hsa-miR-6813-5p 1 0 0
chr19:49803367|49803598 hsa-miR-6819-5p 1 0 0
chr19:49803367|49803598 hsa-miR-6851-5p 1 0 0
chr19:49803367|49803598 hsa-miR-7107-5p 1 0 0
chr19:49803367|49803598 hsa-miR-1249-5p 1 0 0
chr19:49803367|49803598 hsa-miR-6722-3p 1 0 0
chr19:49803367|49803598 hsa-miR-6763-5p 1 0 0
chr19:49803367|49803598 hsa-miR-6779-5p 0 1 0
chr19:49803367|49803598 hsa-miR-6808-5p 1 1 0
chr19:49803367|49803598 hsa-miR-6879-5p 1 0 0
chr19:49803367|49803598 hsa-miR-7111-5p 1 0 0
chr19:49803367|49803598 hsa-miR-3620-5p 1 0 0
chr19:49803367|49803598 hsa-miR-4728-5p 1 0 0
chr19:49803367|49803598 hsa-miR-6780b-5p 1 1 0
chr19:49803367|49803598 hsa-miR-10396b-5p 1 0 0
chr19:49803367|49803598 hsa-miR-1237-5p 1 0 0
chr19:49803367|49803598 hsa-miR-4725-3p 0 1 0
chr19:49803367|49803598 hsa-miR-4726-5p 1 0 0
chr19:49803367|49803598 hsa-miR-6846-5p 1 0 0
chr19:49803367|49803598 hsa-miR-6848-5p 1 1 0
chr19:49803367|49803598 hsa-miR-6858-5p 1 0 0
chr19:49803367|49803598 hsa-miR-6883-5p 1 0 0
chr19:49803367|49803598 hsa-miR-6511a-5p 1 0 0
chr19:49803367|49803598 hsa-miR-6758-5p 1 1 0
chr19:49803367|49803598 hsa-miR-6856-5p 1 1 0
chr19:49803367|49803598 hsa-miR-10398-3p 1 0 0
chr19:49803367|49803598 hsa-miR-3679-5p 0 1 0
chr19:49803367|49803598 hsa-miR-4646-5p 1 0 0
chr19:49803367|49803598 hsa-miR-4747-5p 1 1 0
chr19:49803367|49803598 hsa-miR-3184-5p 1 0 0
chr19:49803367|49803598 hsa-miR-6724-5p 1 0 0
chr19:49803367|49803598 hsa-miR-550a-5p 0 1 0
chr19:49803367|49803598 hsa-miR-4756-5p 1 0 0
chr19:49803367|49803598 hsa-miR-6884-5p 1 1 0
chr19:49803367|49803598 hsa-miR-3619-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr19:49803367|49803598
ORF Type ORF1
Protein Length 50
Nucleotide Length 150
Protein Sequence MQTLNLRELIACPREAEEKCGPGSAGFPTVRKADVERQEAGPGLRGYESG
Nucleotide Sequence ATGCAGACACTCAATCTCAGAGAACTAATTGCGTGCCCAAGAGAGGCTGAAGAGAAGTGTGGACCTGGGTCAGCCGGCTTCCCCACGGTGAGGAAGGCCGACGTGGAGAGGCAGGAGGCTGGGCCGGGCCTGAGAGGATATGAGTCTGGA
CircID chr19:49803367|49803598
ORF Type ORF2
Protein Length 42
Nucleotide Length 129
Protein Sequence LEVKPPTHHFTVIPCPGGRNPTPILTDADTQSQRTNCVPKRG
Nucleotide Sequence CTGGAAGTAAAGCCTCCCACACACCACTTCACTGTCATCCCCTGTCCTGGGGGAAGGAATCCCACCCCCATCTTAACAGATGCAGACACTCAATCTCAGAGAACTAATTGCGTGCCCAAGAGAGGCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab