CircRNA Information

General Information
circRNA Basic Information
CircID chr19:49863689|49864008
Strand -
CircType exon
Host Gene ENSG00000039650.8;
Algorism CIRI2;
Sequence CTGCTCCTGCAGATGGTCCCACATGCCCGTCACCGGCTTCCGGTACAAGCCTGCGTGCGTGGCCACCAGCACCTGTGGATGGGAGGGGGCCACCAGCTTTAGCTCCCCCTCAAGCACCTACTGGATGCCACCCCAGCCCAGAATTTGTAGCTGATGATGGGTTCCTATCAGCATCACACTGCCTGAGGCCTCCGCCCCGCTTACCCTGGAGTCTAAAGCCCTCGCTCTGGATCTCTGTGCCCCCACATAGCTCCCAGCCTCCCTTCCAGCCATACCTGGAAGGGGACCCCCAGCTTCTCCACCACAGCCTCCACCTTGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:49863689|49864008 hsa-miR-34a-5p 0 0 1
chr19:49863689|49864008 hsa-miR-34a-3p 0 0 1
chr19:49863689|49864008 hsa-miR-320a-5p 0 0 1
chr19:49863689|49864008 hsa-miR-320a-3p 0 0 1
chr19:49863689|49864008 hsa-miR-135b-5p 0 0 1
chr19:49863689|49864008 hsa-miR-135b-3p 0 0 1
chr19:49863689|49864008 hsa-miR-449a 0 1 1
chr19:49863689|49864008 hsa-miR-552-5p 0 0 1
chr19:49863689|49864008 hsa-miR-552-3p 0 0 1
chr19:49863689|49864008 hsa-miR-555 0 0 1
chr19:49863689|49864008 hsa-miR-588 0 0 1
chr19:49863689|49864008 hsa-miR-608 1 1 1
chr19:49863689|49864008 hsa-miR-610 0 0 1
chr19:49863689|49864008 hsa-miR-612 0 0 1
chr19:49863689|49864008 hsa-miR-636 1 0 1
chr19:49863689|49864008 hsa-miR-637 1 1 1
chr19:49863689|49864008 hsa-miR-650 1 0 1
chr19:49863689|49864008 hsa-miR-449b-5p 0 0 1
chr19:49863689|49864008 hsa-miR-449b-3p 0 0 1
chr19:49863689|49864008 hsa-miR-658 0 0 1
chr19:49863689|49864008 hsa-miR-744-5p 0 0 1
chr19:49863689|49864008 hsa-miR-744-3p 0 0 1
chr19:49863689|49864008 hsa-miR-920 1 1 1
chr19:49863689|49864008 hsa-miR-939-5p 0 0 1
chr19:49863689|49864008 hsa-miR-939-3p 0 0 1
chr19:49863689|49864008 hsa-miR-663b 0 0 1
chr19:49863689|49864008 hsa-miR-1205 0 0 1
chr19:49863689|49864008 hsa-miR-1286 0 0 1
chr19:49863689|49864008 hsa-miR-1321 0 0 1
chr19:49863689|49864008 hsa-miR-671-5p 0 1 1
chr19:49863689|49864008 hsa-miR-770-5p 0 0 1
chr19:49863689|49864008 hsa-miR-491-5p 0 0 1
chr19:49863689|49864008 hsa-miR-615-5p 0 1 1
chr19:49863689|49864008 hsa-miR-1283 0 0 1
chr19:49863689|49864008 hsa-miR-485-5p 1 1 1
chr19:49863689|49864008 hsa-miR-299-3p 0 0 1
chr19:49863689|49864008 hsa-miR-1184 0 0 1
chr19:49863689|49864008 hsa-miR-423-5p 0 0 1
chr19:49863689|49864008 hsa-miR-525-5p 0 0 1
chr19:49863689|49864008 hsa-miR-508-5p 0 0 1
chr19:49863689|49864008 hsa-miR-342-5p 0 0 1
chr19:49863689|49864008 hsa-miR-520a-5p 0 0 1
chr19:49863689|49864008 hsa-miR-320b 0 0 1
chr19:49863689|49864008 hsa-miR-320c 0 0 1
chr19:49863689|49864008 hsa-miR-320d 0 0 1
chr19:49863689|49864008 hsa-miR-34c-5p 0 1 1
chr19:49863689|49864008 hsa-miR-138 0 0 1
chr19:49863689|49864008 hsa-miR-1285 0 0 1
chr19:49863689|49864008 hsa-miR-135a 0 0 1
chr19:49863689|49864008 hsa-miR-151-3p 0 0 1
chr19:49863689|49864008 hsa-miR-663a 1 0 0
chr19:49863689|49864008 hsa-miR-762 1 1 0
chr19:49863689|49864008 hsa-miR-760 1 0 0
chr19:49863689|49864008 hsa-miR-921 1 0 0
chr19:49863689|49864008 hsa-miR-3131 1 0 0
chr19:49863689|49864008 hsa-miR-3154 0 1 0
chr19:49863689|49864008 hsa-miR-3188 1 0 0
chr19:49863689|49864008 hsa-miR-3196 1 0 0
chr19:49863689|49864008 hsa-miR-4260 1 0 0
chr19:49863689|49864008 hsa-miR-3612 1 0 0
chr19:49863689|49864008 hsa-miR-3621 1 0 0
chr19:49863689|49864008 hsa-miR-3652 0 1 0
chr19:49863689|49864008 hsa-miR-1268b 1 0 0
chr19:49863689|49864008 hsa-miR-4443 1 1 0
chr19:49863689|49864008 hsa-miR-4447 1 1 0
chr19:49863689|49864008 hsa-miR-4456 0 1 0
chr19:49863689|49864008 hsa-miR-4466 1 0 0
chr19:49863689|49864008 hsa-miR-4488 1 0 0
chr19:49863689|49864008 hsa-miR-4498 1 1 0
chr19:49863689|49864008 hsa-miR-4505 0 1 0
chr19:49863689|49864008 hsa-miR-4507 1 0 0
chr19:49863689|49864008 hsa-miR-4525 1 0 0
chr19:49863689|49864008 hsa-miR-4534 1 0 0
chr19:49863689|49864008 hsa-miR-1587 1 1 0
chr19:49863689|49864008 hsa-miR-3960 1 0 0
chr19:49863689|49864008 hsa-miR-4651 1 0 0
chr19:49863689|49864008 hsa-miR-4656 1 0 0
chr19:49863689|49864008 hsa-miR-4675 1 0 0
chr19:49863689|49864008 hsa-miR-4692 1 1 0
chr19:49863689|49864008 hsa-miR-4706 1 0 0
chr19:49863689|49864008 hsa-miR-4710 1 0 0
chr19:49863689|49864008 hsa-miR-4721 1 1 0
chr19:49863689|49864008 hsa-miR-4739 1 1 0
chr19:49863689|49864008 hsa-miR-4741 1 0 0
chr19:49863689|49864008 hsa-miR-5698 0 1 0
chr19:49863689|49864008 hsa-miR-5703 0 1 0
chr19:49863689|49864008 hsa-miR-5787 1 1 0
chr19:49863689|49864008 hsa-miR-6085 1 0 0
chr19:49863689|49864008 hsa-miR-6086 1 0 0
chr19:49863689|49864008 hsa-miR-6090 1 0 0
chr19:49863689|49864008 hsa-miR-6860 1 0 0
chr19:49863689|49864008 hsa-miR-7974 1 0 0
chr19:49863689|49864008 hsa-miR-8089 1 0 0
chr19:49863689|49864008 hsa-miR-12114 1 1 0
chr19:49863689|49864008 hsa-miR-12115 1 0 0
chr19:49863689|49864008 hsa-miR-138-5p 0 1 0
chr19:49863689|49864008 hsa-miR-6734-5p 0 1 0
chr19:49863689|49864008 hsa-miR-4731-5p 1 1 0
chr19:49863689|49864008 hsa-miR-6747-5p 1 0 0
chr19:49863689|49864008 hsa-miR-6765-5p 1 0 0
chr19:49863689|49864008 hsa-miR-6861-5p 1 0 0
chr19:49863689|49864008 hsa-miR-7106-5p 1 0 0
chr19:49863689|49864008 hsa-miR-6894-5p 1 0 0
chr19:49863689|49864008 hsa-miR-4687-3p 1 0 0
chr19:49863689|49864008 hsa-miR-27a-5p 1 0 0
chr19:49863689|49864008 hsa-miR-25-5p 1 1 0
chr19:49863689|49864008 hsa-miR-6728-5p 1 0 0
chr19:49863689|49864008 hsa-miR-8071 1 0 0
chr19:49863689|49864008 hsa-miR-6515-5p 1 0 0
chr19:49863689|49864008 hsa-miR-6089 1 0 0
chr19:49863689|49864008 hsa-miR-3192-5p 0 1 0
chr19:49863689|49864008 hsa-miR-6880-5p 1 1 0
chr19:49863689|49864008 hsa-miR-7847-3p 1 1 0
chr19:49863689|49864008 hsa-miR-4653-3p 0 1 0
chr19:49863689|49864008 hsa-miR-6741-5p 1 0 0
chr19:49863689|49864008 hsa-miR-6727-5p 1 0 0
chr19:49863689|49864008 hsa-miR-4474-3p 0 1 0
chr19:49863689|49864008 hsa-miR-6721-5p 1 0 0
chr19:49863689|49864008 hsa-miR-197-5p 1 0 0
chr19:49863689|49864008 hsa-miR-6776-5p 1 0 0
chr19:49863689|49864008 hsa-miR-3151-5p 1 0 0
chr19:49863689|49864008 hsa-miR-3180-3p 1 1 0
chr19:49863689|49864008 hsa-miR-6772-5p 1 0 0
chr19:49863689|49864008 hsa-miR-6796-5p 0 1 0
chr19:49863689|49864008 hsa-miR-185-3p 1 0 0
chr19:49863689|49864008 hsa-miR-6827-5p 1 0 0
chr19:49863689|49864008 hsa-miR-6798-5p 1 0 0
chr19:49863689|49864008 hsa-miR-6782-5p 1 0 0
chr19:49863689|49864008 hsa-miR-5006-5p 1 0 0
chr19:49863689|49864008 hsa-miR-6786-5p 1 0 0
chr19:49863689|49864008 hsa-miR-5088-5p 1 0 0
chr19:49863689|49864008 hsa-miR-1226-5p 1 0 0
chr19:49863689|49864008 hsa-miR-1229-5p 1 0 0
chr19:49863689|49864008 hsa-miR-6784-5p 1 0 0
chr19:49863689|49864008 hsa-miR-296-3p 1 0 0
chr19:49863689|49864008 hsa-let-7b-5p 1 0 0
chr19:49863689|49864008 hsa-miR-4713-3p 0 1 0
chr19:49863689|49864008 hsa-miR-3202 0 1 0
chr19:49863689|49864008 hsa-miR-149-3p 1 0 0
chr19:49863689|49864008 hsa-miR-6717-5p 1 0 0
chr19:49863689|49864008 hsa-miR-6824-5p 1 0 0
chr19:49863689|49864008 hsa-miR-6781-5p 1 0 0
chr19:49863689|49864008 hsa-let-7c-5p 1 0 0
chr19:49863689|49864008 hsa-miR-3619-3p 0 1 0
chr19:49863689|49864008 hsa-miR-4750-5p 1 0 0
chr19:49863689|49864008 hsa-miR-6770-3p 1 0 0
chr19:49863689|49864008 hsa-miR-2277-5p 1 0 0
chr19:49863689|49864008 hsa-miR-196a-5p 0 1 0
chr19:49863689|49864008 hsa-miR-10400-5p 1 0 0
chr19:49863689|49864008 hsa-miR-1207-5p 1 1 0
chr19:49863689|49864008 hsa-miR-4763-3p 1 0 0
chr19:49863689|49864008 hsa-miR-6769b-5p 1 0 0
chr19:49863689|49864008 hsa-miR-6787-5p 1 0 0
chr19:49863689|49864008 hsa-miR-6812-5p 1 1 0
chr19:49863689|49864008 hsa-miR-6816-5p 1 0 0
chr19:49863689|49864008 hsa-miR-6870-5p 0 1 0
chr19:49863689|49864008 hsa-miR-6775-5p 1 0 0
chr19:49863689|49864008 hsa-miR-1343-5p 1 0 0
chr19:49863689|49864008 hsa-miR-3180 1 1 0
chr19:49863689|49864008 hsa-miR-5001-5p 1 0 0
chr19:49863689|49864008 hsa-miR-6726-5p 1 1 0
chr19:49863689|49864008 hsa-miR-6752-5p 1 0 0
chr19:49863689|49864008 hsa-miR-6754-5p 1 0 0
chr19:49863689|49864008 hsa-miR-6756-5p 1 0 0
chr19:49863689|49864008 hsa-miR-6803-5p 1 0 0
chr19:49863689|49864008 hsa-miR-6813-5p 1 0 0
chr19:49863689|49864008 hsa-miR-6819-5p 1 0 0
chr19:49863689|49864008 hsa-miR-6842-5p 1 0 0
chr19:49863689|49864008 hsa-miR-6851-5p 1 0 0
chr19:49863689|49864008 hsa-miR-7110-5p 1 0 0
chr19:49863689|49864008 hsa-miR-6808-5p 1 0 0
chr19:49863689|49864008 hsa-miR-7111-5p 0 1 0
chr19:49863689|49864008 hsa-miR-3127-3p 0 1 0
chr19:49863689|49864008 hsa-miR-3620-5p 1 1 0
chr19:49863689|49864008 hsa-miR-6862-5p 0 1 0
chr19:49863689|49864008 hsa-miR-10396a-5p 1 0 0
chr19:49863689|49864008 hsa-miR-10396b-5p 1 0 0
chr19:49863689|49864008 hsa-miR-1237-5p 1 0 0
chr19:49863689|49864008 hsa-miR-328-5p 1 0 0
chr19:49863689|49864008 hsa-miR-449c-5p 1 1 0
chr19:49863689|49864008 hsa-miR-4649-5p 1 1 0
chr19:49863689|49864008 hsa-miR-4685-5p 1 0 0
chr19:49863689|49864008 hsa-miR-4749-5p 1 0 0
chr19:49863689|49864008 hsa-miR-6729-5p 1 0 0
chr19:49863689|49864008 hsa-miR-675-5p 1 0 0
chr19:49863689|49864008 hsa-miR-6794-5p 0 1 0
chr19:49863689|49864008 hsa-miR-6795-5p 1 0 0
chr19:49863689|49864008 hsa-miR-6846-5p 1 1 0
chr19:49863689|49864008 hsa-miR-6848-5p 1 1 0
chr19:49863689|49864008 hsa-miR-6887-5p 1 0 0
chr19:49863689|49864008 hsa-miR-4697-5p 1 0 0
chr19:49863689|49864008 hsa-miR-4723-5p 1 1 0
chr19:49863689|49864008 hsa-miR-6831-5p 1 0 0
chr19:49863689|49864008 hsa-miR-4758-5p 1 0 0
chr19:49863689|49864008 hsa-miR-34b-5p 0 1 0
chr19:49863689|49864008 hsa-miR-3198 1 0 0
chr19:49863689|49864008 hsa-miR-3940-5p 1 1 0
chr19:49863689|49864008 hsa-miR-377-5p 1 0 0
chr19:49863689|49864008 hsa-miR-4665-5p 1 0 0
chr19:49863689|49864008 hsa-miR-4646-5p 1 0 0
chr19:49863689|49864008 hsa-miR-4716-3p 0 1 0
chr19:49863689|49864008 hsa-miR-6766-5p 1 0 0
chr19:49863689|49864008 hsa-miR-5591-5p 1 1 0
chr19:49863689|49864008 hsa-miR-10398-5p 0 1 0
chr19:49863689|49864008 hsa-miR-6529-5p 0 1 0
chr19:49863689|49864008 hsa-miR-6884-5p 1 1 0
chr19:49863689|49864008 hsa-miR-10394-5p 0 1 0
chr19:49863689|49864008 hsa-miR-2682-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr19:49863689|49864008
ORF Type ORF1
Protein Length 33
Nucleotide Length 102
Protein Sequence LLLQMVPHARHRLPVQACVRGHQHLWMGGGHQL
Nucleotide Sequence CTGCTCCTGCAGATGGTCCCACATGCCCGTCACCGGCTTCCGGTACAAGCCTGCGTGCGTGGCCACCAGCACCTGTGGATGGGAGGGGGCCACCAGCTTTAG
CircID chr19:49863689|49864008
ORF Type ORF2
Protein Length 28
Nucleotide Length 84
Protein Sequence MCPHIAPSLPSSHTWKGTPSFSTTASTL
Nucleotide Sequence CTGTGCCCCCACATAGCTCCCAGCCTCCCTTCCAGCCATACCTGGAAGGGGACCCCCAGCTTCTCCACCACAGCCTCCACCTTG
CircID chr19:49863689|49864008
ORF Type ORF3
Protein Length 43
Nucleotide Length 132
Protein Sequence MPVTGFRYKPACVATSTCGWEGATSFSSPSSTYWMPPQPRICS
Nucleotide Sequence ATGCCCGTCACCGGCTTCCGGTACAAGCCTGCGTGCGTGGCCACCAGCACCTGTGGATGGGAGGGGGCCACCAGCTTTAGCTCCCCCTCAAGCACCTACTGGATGCCACCCCAGCCCAGAATTTGTAGCTGA
CircID chr19:49863689|49864008
ORF Type ORF4
Protein Length 90
Nucleotide Length 270
Protein Sequence MRAWPPAPVDGRGPPALAPPQAPTGCHPSPEFVADDGFLSASHCLRPPPRLPWSLKPSLWISVPPHSSQPPFQPYLEGDPQLLHHSLHLG
Nucleotide Sequence CTGCGTGCGTGGCCACCAGCACCTGTGGATGGGAGGGGGCCACCAGCTTTAGCTCCCCCTCAAGCACCTACTGGATGCCACCCCAGCCCAGAATTTGTAGCTGATGATGGGTTCCTATCAGCATCACACTGCCTGAGGCCTCCGCCCCGCTTACCCTGGAGTCTAAAGCCCTCGCTCTGGATCTCTGTGCCCCCACATAGCTCCCAGCCTCCCTTCCAGCCATACCTGGAAGGGGACCCCCAGCTTCTCCACCACAGCCTCCACCTTGGC
CircID chr19:49863689|49864008
ORF Type ORF5
Protein Length 26
Nucleotide Length 81
Protein Sequence MGVPFQVWLEGRLGAMWGHRDPERGL
Nucleotide Sequence CTGGGGGTCCCCTTCCAGGTATGGCTGGAAGGGAGGCTGGGAGCTATGTGGGGGCACAGAGATCCAGAGCGAGGGCTTTAG
CircID chr19:49863689|49864008
ORF Type ORF6
Protein Length 65
Nucleotide Length 198
Protein Sequence MWWRSWGSPSRYGWKGGWELCGGTEIQSEGFRLQGKRGGGLRQCDADRNPSSATNSGLGWHPVGA
Nucleotide Sequence CTGTGGTGGAGAAGCTGGGGGTCCCCTTCCAGGTATGGCTGGAAGGGAGGCTGGGAGCTATGTGGGGGCACAGAGATCCAGAGCGAGGGCTTTAGACTCCAGGGTAAGCGGGGCGGAGGCCTCAGGCAGTGTGATGCTGATAGGAACCCATCATCAGCTACAAATTCTGGGCTGGGGTGGCATCCAGTAGGTGCTTGA
CircID chr19:49863689|49864008
ORF Type ORF7
Protein Length 51
Nucleotide Length 156
Protein Sequence MAGREAGSYVGAQRSRARALDSRVSGAEASGSVMLIGTHHQLQILGWGGIQ
Nucleotide Sequence ATGGCTGGAAGGGAGGCTGGGAGCTATGTGGGGGCACAGAGATCCAGAGCGAGGGCTTTAGACTCCAGGGTAAGCGGGGCGGAGGCCTCAGGCAGTGTGATGCTGATAGGAACCCATCATCAGCTACAAATTCTGGGCTGGGGTGGCATCCAGTAG
CircID chr19:49863689|49864008
ORF Type ORF8
Protein Length 32
Nucleotide Length 96
Protein Sequence MVAPSHPQVLVATHAGLYRKPVTGMWDHLQEQ
Nucleotide Sequence CTGGTGGCCCCCTCCCATCCACAGGTGCTGGTGGCCACGCACGCAGGCTTGTACCGGAAGCCGGTGACGGGCATGTGGGACCATCTGCAGGAGCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab