CircRNA Information

General Information
circRNA Basic Information
CircID chr19:50359545|50359858
Strand +
CircType exon
Host Gene ENSG00000131400.6;
Algorism CIRI2;
Sequence CCTGAAGAGCCTGATGGAGGAGAGCTGGTCCTGGGGGGCTCGGACCCGGCACACTACATCCCACCCCTCACCTTCGTGCCAGTCACGGTCCCTGCCTACTGGCAGATCCACATGGAGCGGTGAGGGACTTGGTCTCCTGGCTCTGGAGCTGGAGGCTGGGGGCCTGGACTCCTAGGACCCTGCCTCTGATGACTGCCTCCTTCCCCCTCAGTGTGAAGGTGGGCCCAGGGCTGACTCTCTGTGCCAAGGGCTGTGCTGCCATCCTGGATACGGGCACGTCCCTCATCACAGGACCCACTGAGGAGATCCGGGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:50359545|50359858 hsa-miR-96-5p 0 0 1
chr19:50359545|50359858 hsa-miR-96-3p 0 0 1
chr19:50359545|50359858 hsa-miR-134-5p 0 0 1
chr19:50359545|50359858 hsa-miR-134-3p 0 0 1
chr19:50359545|50359858 hsa-miR-377-5p 0 0 1
chr19:50359545|50359858 hsa-miR-377-3p 0 0 1
chr19:50359545|50359858 hsa-miR-484 0 0 1
chr19:50359545|50359858 hsa-miR-564 0 0 1
chr19:50359545|50359858 hsa-miR-608 1 1 1
chr19:50359545|50359858 hsa-miR-625-5p 0 0 1
chr19:50359545|50359858 hsa-miR-625-3p 0 0 1
chr19:50359545|50359858 hsa-miR-648 0 1 1
chr19:50359545|50359858 hsa-miR-650 1 1 1
chr19:50359545|50359858 hsa-miR-1271-5p 0 0 1
chr19:50359545|50359858 hsa-miR-1271-3p 0 0 1
chr19:50359545|50359858 hsa-miR-766-5p 0 0 1
chr19:50359545|50359858 hsa-miR-766-3p 0 0 1
chr19:50359545|50359858 hsa-miR-665 0 1 1
chr19:50359545|50359858 hsa-miR-940 1 1 1
chr19:50359545|50359858 hsa-miR-1827 0 0 1
chr19:50359545|50359858 hsa-miR-1225-3p 0 0 1
chr19:50359545|50359858 hsa-miR-296-5p 0 0 1
chr19:50359545|50359858 hsa-miR-615-3p 0 0 1
chr19:50359545|50359858 hsa-miR-885-3p 0 0 1
chr19:50359545|50359858 hsa-miR-1289 0 1 1
chr19:50359545|50359858 hsa-miR-423-5p 0 0 1
chr19:50359545|50359858 hsa-miR-525-5p 0 0 1
chr19:50359545|50359858 hsa-miR-361-3p 0 1 1
chr19:50359545|50359858 hsa-miR-1224-3p 0 0 1
chr19:50359545|50359858 hsa-miR-1207-5p 1 1 1
chr19:50359545|50359858 hsa-miR-520a-5p 0 0 1
chr19:50359545|50359858 hsa-miR-142-3p 0 0 1
chr19:50359545|50359858 hsa-miR-129-3p 0 0 1
chr19:50359545|50359858 hsa-miR-762 1 0 0
chr19:50359545|50359858 hsa-miR-1182 1 1 0
chr19:50359545|50359858 hsa-miR-1203 0 1 0
chr19:50359545|50359858 hsa-miR-1538 0 1 0
chr19:50359545|50359858 hsa-miR-3155a 0 1 0
chr19:50359545|50359858 hsa-miR-3185 1 0 0
chr19:50359545|50359858 hsa-miR-4292 1 1 0
chr19:50359545|50359858 hsa-miR-3612 0 1 0
chr19:50359545|50359858 hsa-miR-3943 0 1 0
chr19:50359545|50359858 hsa-miR-3155b 0 1 0
chr19:50359545|50359858 hsa-miR-4491 0 1 0
chr19:50359545|50359858 hsa-miR-4533 0 1 0
chr19:50359545|50359858 hsa-miR-4651 1 1 0
chr19:50359545|50359858 hsa-miR-4654 0 1 0
chr19:50359545|50359858 hsa-miR-4657 0 1 0
chr19:50359545|50359858 hsa-miR-4683 0 1 0
chr19:50359545|50359858 hsa-miR-4688 1 0 0
chr19:50359545|50359858 hsa-miR-4739 1 0 0
chr19:50359545|50359858 hsa-miR-4752 0 1 0
chr19:50359545|50359858 hsa-miR-5090 1 0 0
chr19:50359545|50359858 hsa-miR-8052 0 1 0
chr19:50359545|50359858 hsa-miR-4747-3p 1 0 0
chr19:50359545|50359858 hsa-miR-6734-5p 1 1 0
chr19:50359545|50359858 hsa-miR-6765-5p 1 0 0
chr19:50359545|50359858 hsa-miR-6720-5p 1 0 0
chr19:50359545|50359858 hsa-miR-4768-3p 0 1 0
chr19:50359545|50359858 hsa-miR-6089 1 0 0
chr19:50359545|50359858 hsa-miR-4695-5p 1 1 0
chr19:50359545|50359858 hsa-miR-6806-5p 1 1 0
chr19:50359545|50359858 hsa-miR-6721-5p 0 1 0
chr19:50359545|50359858 hsa-miR-6849-3p 0 1 0
chr19:50359545|50359858 hsa-miR-6845-3p 0 1 0
chr19:50359545|50359858 hsa-miR-423-3p 1 0 0
chr19:50359545|50359858 hsa-miR-6772-5p 1 0 0
chr19:50359545|50359858 hsa-miR-6793-5p 0 1 0
chr19:50359545|50359858 hsa-miR-3126-5p 0 1 0
chr19:50359545|50359858 hsa-miR-6782-5p 0 1 0
chr19:50359545|50359858 hsa-miR-3691-3p 0 1 0
chr19:50359545|50359858 hsa-miR-6786-5p 1 0 0
chr19:50359545|50359858 hsa-miR-939-3p 0 1 0
chr19:50359545|50359858 hsa-miR-1226-5p 1 0 0
chr19:50359545|50359858 hsa-miR-1908-5p 1 1 0
chr19:50359545|50359858 hsa-miR-6789-5p 1 0 0
chr19:50359545|50359858 hsa-miR-194-3p 0 1 0
chr19:50359545|50359858 hsa-miR-5571-3p 0 1 0
chr19:50359545|50359858 hsa-miR-584-3p 0 1 0
chr19:50359545|50359858 hsa-miR-7112-3p 1 1 0
chr19:50359545|50359858 hsa-miR-1910-5p 0 1 0
chr19:50359545|50359858 hsa-miR-6741-3p 0 1 0
chr19:50359545|50359858 hsa-miR-3177-3p 0 1 0
chr19:50359545|50359858 hsa-miR-6779-3p 0 1 0
chr19:50359545|50359858 hsa-miR-4679 0 1 0
chr19:50359545|50359858 hsa-miR-1233-5p 1 0 0
chr19:50359545|50359858 hsa-miR-4763-3p 1 1 0
chr19:50359545|50359858 hsa-miR-6778-5p 1 0 0
chr19:50359545|50359858 hsa-miR-6812-5p 1 0 0
chr19:50359545|50359858 hsa-miR-6893-5p 0 1 0
chr19:50359545|50359858 hsa-miR-6743-5p 1 0 0
chr19:50359545|50359858 hsa-miR-6756-5p 0 1 0
chr19:50359545|50359858 hsa-miR-6803-5p 1 0 0
chr19:50359545|50359858 hsa-miR-6851-5p 1 0 0
chr19:50359545|50359858 hsa-miR-6797-5p 1 0 0
chr19:50359545|50359858 hsa-miR-6808-5p 0 1 0
chr19:50359545|50359858 hsa-miR-7111-5p 1 0 0
chr19:50359545|50359858 hsa-miR-3620-5p 1 0 0
chr19:50359545|50359858 hsa-miR-6780b-5p 0 1 0
chr19:50359545|50359858 hsa-miR-6836-5p 1 0 0
chr19:50359545|50359858 hsa-miR-328-5p 1 0 0
chr19:50359545|50359858 hsa-miR-449c-5p 0 1 0
chr19:50359545|50359858 hsa-miR-4649-5p 1 0 0
chr19:50359545|50359858 hsa-miR-4725-3p 0 1 0
chr19:50359545|50359858 hsa-miR-4745-3p 0 1 0
chr19:50359545|50359858 hsa-miR-6794-5p 0 1 0
chr19:50359545|50359858 hsa-miR-6848-5p 1 0 0
chr19:50359545|50359858 hsa-miR-6858-5p 1 0 0
chr19:50359545|50359858 hsa-miR-4769-5p 0 1 0
chr19:50359545|50359858 hsa-miR-34b-5p 0 1 0
chr19:50359545|50359858 hsa-miR-3173-3p 0 1 0
chr19:50359545|50359858 hsa-miR-4747-5p 1 1 0
chr19:50359545|50359858 hsa-miR-4716-3p 0 1 0
chr19:50359545|50359858 hsa-miR-3184-5p 1 0 0
chr19:50359545|50359858 hsa-miR-6724-5p 1 0 0
chr19:50359545|50359858 hsa-miR-769-3p 1 0 0
chr19:50359545|50359858 hsa-miR-6792-3p 0 1 0
chr19:50359545|50359858 hsa-miR-6837-5p 0 1 0
chr19:50359545|50359858 hsa-miR-10392-3p 0 1 0
chr19:50359545|50359858 hsa-miR-4691-5p 0 1 0
chr19:50359545|50359858 hsa-miR-5195-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr19:50359545|50359858
ORF Type ORF1
Protein Length 32
Nucleotide Length 99
Protein Sequence MVLGGSDPAHYIPPLTFVPVTVPAYWQIHMER
Nucleotide Sequence CTGGTCCTGGGGGGCTCGGACCCGGCACACTACATCCCACCCCTCACCTTCGTGCCAGTCACGGTCCCTGCCTACTGGCAGATCCACATGGAGCGGTGA
CircID chr19:50359545|50359858
ORF Type ORF2
Protein Length 57
Nucleotide Length 174
Protein Sequence LKSLMEESWSWGARTRHTTSHPSPSCQSRSLPTGRSTWSGEGLGLLALELEAGGLDS
Nucleotide Sequence CTGAAGAGCCTGATGGAGGAGAGCTGGTCCTGGGGGGCTCGGACCCGGCACACTACATCCCACCCCTCACCTTCGTGCCAGTCACGGTCCCTGCCTACTGGCAGATCCACATGGAGCGGTGAGGGACTTGGTCTCCTGGCTCTGGAGCTGGAGGCTGGGGGCCTGGACTCCTAG
CircID chr19:50359545|50359858
ORF Type ORF3
Protein Length 72
Nucleotide Length 216
Protein Sequence MADPHGAVRDLVSWLWSWRLGAWTPRTLPLMTASFPLSVKVGPGLTLCAKGCAAILDTGTSLITGPTEEIRA
Nucleotide Sequence CTGGCAGATCCACATGGAGCGGTGAGGGACTTGGTCTCCTGGCTCTGGAGCTGGAGGCTGGGGGCCTGGACTCCTAGGACCCTGCCTCTGATGACTGCCTCCTTCCCCCTCAGTGTGAAGGTGGGCCCAGGGCTGACTCTCTGTGCCAAGGGCTGTGCTGCCATCCTGGATACGGGCACGTCCCTCATCACAGGACCCACTGAGGAGATCCGGGCC
CircID chr19:50359545|50359858
ORF Type ORF4
Protein Length 67
Nucleotide Length 204
Protein Sequence MRDVPVSRMAAQPLAQRVSPGPTFTLRGKEAVIRGRVLGVQAPSLQLQSQETKSLTAPCGSASRQGP
Nucleotide Sequence ATGAGGGACGTGCCCGTATCCAGGATGGCAGCACAGCCCTTGGCACAGAGAGTCAGCCCTGGGCCCACCTTCACACTGAGGGGGAAGGAGGCAGTCATCAGAGGCAGGGTCCTAGGAGTCCAGGCCCCCAGCCTCCAGCTCCAGAGCCAGGAGACCAAGTCCCTCACCGCTCCATGTGGATCTGCCAGTAGGCAGGGACCGTGA
CircID chr19:50359545|50359858
ORF Type ORF5
Protein Length 35
Nucleotide Length 105
Protein Sequence MPVGRDRDWHEGEGWDVVCRVRAPQDQLSSIRLFR
Nucleotide Sequence CTGCCAGTAGGCAGGGACCGTGACTGGCACGAAGGTGAGGGGTGGGATGTAGTGTGCCGGGTCCGAGCCCCCCAGGACCAGCTCTCCTCCATCAGGCTCTTCAGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab