CircRNA Information

General Information
circRNA Basic Information
CircID chr19:50417045|50417269
Strand +
CircType exon
Host Gene ENSG00000062822.11;
Algorism CIRI2;
Sequence CTGGTGCAGATGACGTCCTCGTGCAGGCTGCCCTGGCAGCGCTGGCACTGCGTCCAGAGGCGCGAGAAGCGCTCCTCCAGGGCATTCAGATGGGATACCTGGGGACGGCAGCGGCTGAGCAGGGCGCCCCCGCCTCCCCACCTGGCCCCTCCTCACCTCCCGGCCCTCTCACCTCCTTCTGATACAGCTCAGACTCCCGGGGCTGGCAGAACTCACACACGGCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:50417045|50417269 hsa-miR-422a 0 0 1
chr19:50417045|50417269 hsa-miR-558 0 0 1
chr19:50417045|50417269 hsa-miR-596 0 1 1
chr19:50417045|50417269 hsa-miR-598-5p 0 0 1
chr19:50417045|50417269 hsa-miR-598-3p 0 0 1
chr19:50417045|50417269 hsa-miR-611 0 0 1
chr19:50417045|50417269 hsa-miR-765 0 0 1
chr19:50417045|50417269 hsa-miR-874-5p 0 0 1
chr19:50417045|50417269 hsa-miR-874-3p 0 0 1
chr19:50417045|50417269 hsa-miR-939-5p 0 0 1
chr19:50417045|50417269 hsa-miR-939-3p 0 0 1
chr19:50417045|50417269 hsa-miR-1202 0 1 1
chr19:50417045|50417269 hsa-miR-491-5p 0 0 1
chr19:50417045|50417269 hsa-miR-767-5p 0 0 1
chr19:50417045|50417269 hsa-miR-361-5p 0 0 1
chr19:50417045|50417269 hsa-miR-146b-3p 0 0 1
chr19:50417045|50417269 hsa-miR-423-5p 0 1 1
chr19:50417045|50417269 hsa-miR-767-3p 0 0 1
chr19:50417045|50417269 hsa-miR-378 0 0 1
chr19:50417045|50417269 hsa-miR-663 0 0 1
chr19:50417045|50417269 hsa-miR-365 0 0 1
chr19:50417045|50417269 hsa-miR-663a 1 1 0
chr19:50417045|50417269 hsa-miR-658 1 0 0
chr19:50417045|50417269 hsa-miR-762 1 0 0
chr19:50417045|50417269 hsa-miR-1538 1 0 0
chr19:50417045|50417269 hsa-miR-2861 1 0 0
chr19:50417045|50417269 hsa-miR-3141 1 0 0
chr19:50417045|50417269 hsa-miR-3196 1 0 0
chr19:50417045|50417269 hsa-miR-4303 0 1 0
chr19:50417045|50417269 hsa-miR-4270 1 0 0
chr19:50417045|50417269 hsa-miR-378g 1 0 0
chr19:50417045|50417269 hsa-miR-4466 1 0 0
chr19:50417045|50417269 hsa-miR-4481 1 0 0
chr19:50417045|50417269 hsa-miR-2392 1 0 0
chr19:50417045|50417269 hsa-miR-4533 1 0 0
chr19:50417045|50417269 hsa-miR-1587 1 0 0
chr19:50417045|50417269 hsa-miR-3972 0 1 0
chr19:50417045|50417269 hsa-miR-4651 1 0 0
chr19:50417045|50417269 hsa-miR-4656 1 0 0
chr19:50417045|50417269 hsa-miR-4689 1 1 0
chr19:50417045|50417269 hsa-miR-4706 1 0 0
chr19:50417045|50417269 hsa-miR-4710 1 1 0
chr19:50417045|50417269 hsa-miR-4721 1 0 0
chr19:50417045|50417269 hsa-miR-4739 1 1 0
chr19:50417045|50417269 hsa-miR-4741 1 0 0
chr19:50417045|50417269 hsa-miR-4767 1 0 0
chr19:50417045|50417269 hsa-miR-5194 1 0 0
chr19:50417045|50417269 hsa-miR-5787 1 1 0
chr19:50417045|50417269 hsa-miR-6069 1 0 0
chr19:50417045|50417269 hsa-miR-6085 1 0 0
chr19:50417045|50417269 hsa-miR-6086 1 0 0
chr19:50417045|50417269 hsa-miR-6127 1 0 0
chr19:50417045|50417269 hsa-miR-6165 1 0 0
chr19:50417045|50417269 hsa-miR-6860 1 0 0
chr19:50417045|50417269 hsa-miR-8085 1 0 0
chr19:50417045|50417269 hsa-miR-9899 1 1 0
chr19:50417045|50417269 hsa-miR-12118 0 1 0
chr19:50417045|50417269 hsa-miR-12119 1 0 0
chr19:50417045|50417269 hsa-miR-4433b-3p 1 0 0
chr19:50417045|50417269 hsa-miR-6734-5p 1 1 0
chr19:50417045|50417269 hsa-miR-1247-3p 0 1 0
chr19:50417045|50417269 hsa-miR-4665-3p 0 1 0
chr19:50417045|50417269 hsa-miR-4726-3p 0 1 0
chr19:50417045|50417269 hsa-miR-6765-5p 1 1 0
chr19:50417045|50417269 hsa-miR-671-5p 1 0 0
chr19:50417045|50417269 hsa-miR-7106-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6825-5p 1 1 0
chr19:50417045|50417269 hsa-miR-6894-5p 1 0 0
chr19:50417045|50417269 hsa-miR-125a-3p 1 0 0
chr19:50417045|50417269 hsa-miR-6799-5p 1 1 0
chr19:50417045|50417269 hsa-miR-1227-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6089 1 0 0
chr19:50417045|50417269 hsa-miR-3192-5p 0 1 0
chr19:50417045|50417269 hsa-miR-6757-5p 1 0 0
chr19:50417045|50417269 hsa-miR-4695-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6746-5p 1 0 0
chr19:50417045|50417269 hsa-miR-4709-3p 1 0 0
chr19:50417045|50417269 hsa-miR-4722-5p 1 0 0
chr19:50417045|50417269 hsa-miR-3677-5p 1 0 0
chr19:50417045|50417269 hsa-miR-3189-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6787-3p 1 1 0
chr19:50417045|50417269 hsa-miR-6742-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6732-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6805-5p 1 0 0
chr19:50417045|50417269 hsa-miR-1224-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6782-5p 1 0 0
chr19:50417045|50417269 hsa-miR-3194-5p 1 1 0
chr19:50417045|50417269 hsa-miR-7855-5p 1 0 0
chr19:50417045|50417269 hsa-miR-5006-5p 0 1 0
chr19:50417045|50417269 hsa-miR-6786-5p 1 0 0
chr19:50417045|50417269 hsa-miR-1909-5p 1 0 0
chr19:50417045|50417269 hsa-miR-1229-5p 1 0 0
chr19:50417045|50417269 hsa-miR-4640-5p 1 1 0
chr19:50417045|50417269 hsa-miR-1908-5p 0 1 0
chr19:50417045|50417269 hsa-miR-6771-5p 1 1 0
chr19:50417045|50417269 hsa-miR-7854-3p 1 1 0
chr19:50417045|50417269 hsa-miR-6501-5p 0 1 0
chr19:50417045|50417269 hsa-miR-4743-5p 1 0 0
chr19:50417045|50417269 hsa-miR-4787-5p 1 0 0
chr19:50417045|50417269 hsa-miR-4446-3p 1 0 0
chr19:50417045|50417269 hsa-miR-149-3p 1 1 0
chr19:50417045|50417269 hsa-miR-6789-5p 1 0 0
chr19:50417045|50417269 hsa-miR-3162-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6802-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6781-5p 1 1 0
chr19:50417045|50417269 hsa-miR-6877-5p 1 0 0
chr19:50417045|50417269 hsa-miR-4999-5p 0 1 0
chr19:50417045|50417269 hsa-miR-6818-5p 0 1 0
chr19:50417045|50417269 hsa-miR-668-5p 0 1 0
chr19:50417045|50417269 hsa-miR-518c-5p 0 1 0
chr19:50417045|50417269 hsa-miR-5587-3p 0 1 0
chr19:50417045|50417269 hsa-miR-6789-3p 0 1 0
chr19:50417045|50417269 hsa-miR-4727-5p 0 1 0
chr19:50417045|50417269 hsa-miR-1207-5p 1 0 0
chr19:50417045|50417269 hsa-miR-1233-5p 1 0 0
chr19:50417045|50417269 hsa-miR-4763-3p 1 0 0
chr19:50417045|50417269 hsa-miR-6769b-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6778-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6787-5p 1 1 0
chr19:50417045|50417269 hsa-miR-6812-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6816-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6870-5p 1 0 0
chr19:50417045|50417269 hsa-miR-1343-5p 1 0 0
chr19:50417045|50417269 hsa-miR-5001-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6726-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6743-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6752-5p 1 1 0
chr19:50417045|50417269 hsa-miR-6756-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6769a-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6803-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6813-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6851-5p 1 1 0
chr19:50417045|50417269 hsa-miR-7110-5p 1 0 0
chr19:50417045|50417269 hsa-miR-11181-3p 1 0 0
chr19:50417045|50417269 hsa-miR-1249-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6751-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6763-5p 1 1 0
chr19:50417045|50417269 hsa-miR-6779-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6879-5p 1 1 0
chr19:50417045|50417269 hsa-miR-7111-5p 1 0 0
chr19:50417045|50417269 hsa-miR-3620-5p 1 0 0
chr19:50417045|50417269 hsa-miR-4728-5p 1 0 0
chr19:50417045|50417269 hsa-miR-5196-5p 1 0 0
chr19:50417045|50417269 hsa-miR-10396b-5p 1 0 0
chr19:50417045|50417269 hsa-miR-1237-5p 1 0 0
chr19:50417045|50417269 hsa-miR-1909-3p 1 0 0
chr19:50417045|50417269 hsa-miR-328-5p 1 1 0
chr19:50417045|50417269 hsa-miR-4632-5p 0 1 0
chr19:50417045|50417269 hsa-miR-4649-5p 1 0 0
chr19:50417045|50417269 hsa-miR-4725-3p 1 0 0
chr19:50417045|50417269 hsa-miR-4726-5p 1 1 0
chr19:50417045|50417269 hsa-miR-4745-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6729-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6735-5p 0 1 0
chr19:50417045|50417269 hsa-miR-675-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6794-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6795-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6848-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6858-5p 1 1 0
chr19:50417045|50417269 hsa-miR-6887-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6889-5p 1 0 0
chr19:50417045|50417269 hsa-miR-4436b-3p 0 1 0
chr19:50417045|50417269 hsa-miR-4697-5p 0 1 0
chr19:50417045|50417269 hsa-miR-6885-5p 1 0 0
chr19:50417045|50417269 hsa-miR-4758-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6758-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6799-3p 0 1 0
chr19:50417045|50417269 hsa-miR-1914-3p 1 0 0
chr19:50417045|50417269 hsa-miR-3173-3p 0 1 0
chr19:50417045|50417269 hsa-miR-6891-5p 1 1 0
chr19:50417045|50417269 hsa-miR-6785-5p 1 0 0
chr19:50417045|50417269 hsa-miR-3184-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6762-5p 1 1 0
chr19:50417045|50417269 hsa-miR-330-5p 1 0 0
chr19:50417045|50417269 hsa-miR-6874-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr19:50417045|50417269
ORF Type ORF1
Protein Length 75
Nucleotide Length 225
Protein Sequence LVQMTSSCRLPWQRWHCVQRREKRSSRAFRWDTWGRQRLSRAPPPPHLAPPHLPALSPPSDTAQTPGAGRTHTRL
Nucleotide Sequence CTGGTGCAGATGACGTCCTCGTGCAGGCTGCCCTGGCAGCGCTGGCACTGCGTCCAGAGGCGCGAGAAGCGCTCCTCCAGGGCATTCAGATGGGATACCTGGGGACGGCAGCGGCTGAGCAGGGCGCCCCCGCCTCCCCACCTGGCCCCTCCTCACCTCCCGGCCCTCTCACCTCCTTCTGATACAGCTCAGACTCCCGGGGCTGGCAGAACTCACACACGGCTC

CircID chr19:50417045|50417269
ORF Type ORF2
Protein Length 49
Nucleotide Length 150
Protein Sequence MAALALRPEAREALLQGIQMGYLGTAAAEQGAPASPPGPSSPPGPLTSF
Nucleotide Sequence CTGGCAGCGCTGGCACTGCGTCCAGAGGCGCGAGAAGCGCTCCTCCAGGGCATTCAGATGGGATACCTGGGGACGGCAGCGGCTGAGCAGGGCGCCCCCGCCTCCCCACCTGGCCCCTCCTCACCTCCCGGCCCTCTCACCTCCTTCTGA

CircID chr19:50417045|50417269
ORF Type ORF3
Protein Length 37
Nucleotide Length 111
Protein Sequence MPSPGIPSECPGGALLAPLDAVPALPGQPARGRHLHQ
Nucleotide Sequence CTGCCGTCCCCAGGTATCCCATCTGAATGCCCTGGAGGAGCGCTTCTCGCGCCTCTGGACGCAGTGCCAGCGCTGCCAGGGCAGCCTGCACGAGGACGTCATCTGCACCAG

CircID chr19:50417045|50417269
ORF Type ORF4
Protein Length 40
Nucleotide Length 120
Protein Sequence MLSRCRPQVSHLNALEERFSRLWTQCQRCQGSLHEDVICT
Nucleotide Sequence CTGCTCAGCCGCTGCCGTCCCCAGGTATCCCATCTGAATGCCCTGGAGGAGCGCTTCTCGCGCCTCTGGACGCAGTGCCAGCGCTGCCAGGGCAGCCTGCACGAGGACGTCATCTGCACC

CircID chr19:50417045|50417269
ORF Type ORF5
Protein Length 33
Nucleotide Length 102
Protein Sequence MYQKEVRGPGGEEGPGGEAGAPCSAAAVPRYPI
Nucleotide Sequence CTGTATCAGAAGGAGGTGAGAGGGCCGGGAGGTGAGGAGGGGCCAGGTGGGGAGGCGGGGGCGCCCTGCTCAGCCGCTGCCGTCCCCAGGTATCCCATCTGA

CircID chr19:50417045|50417269
ORF Type ORF6
Protein Length 28
Nucleotide Length 84
Protein Sequence MPWRSASRASGRSASAARAACTRTSSAP
Nucleotide Sequence ATGCCCTGGAGGAGCGCTTCTCGCGCCTCTGGACGCAGTGCCAGCGCTGCCAGGGCAGCCTGCACGAGGACGTCATCTGCACCA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites