CircNet

General Information

circRNA Basic Information

CircID	chr19:5110622\|5138070
Strand	+
CircType	exon
Host Gene	ENSG00000127663.14;
Algorism	find_circ;CIRI2;DCC;
Sequence	TGCACGTGCCGGAAGGACATGGTCAAGATCTCCATGGACGTGTTCGTGCGCATCCTGCAGCCCGAGCGCTACGAGCTGTGGAAGCAGGGCAAGGACCTCACGGTGCTGGACCACACGCGGCCCACGGCGCTCACCAGCCCCGAGCTGAGCTCCTGGAGTGCATCCCGGGCCTCGCTGAAGGCCAAGCTCCTCCGCAGGAGTGCTGCCTGTGCAACCTGCGAGGAGGTGCGCTGCAGATGACCACCGATAGGAGGTGGATCCACGTGATCTGTGCCATCGCAGTCCCCGAGGCGCGCTTCCTGAACGTGATTGAGCGCCACCCTGTGGACATCAGCGCCATCCCCGAGCAGCGGTGGAAGCTG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:5110622\|5138070	hsa-miR-27b-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:5110622\|5138070
ORF Type	ORF1
Protein Length	74
Nucleotide Length	222
Protein Sequence	MVKISMDVFVRILQPERYELWKQGKDLTVLDHTRPTALTSPELSSWSASRASLKAKLLRRSAACATCEEVRCR*
Nucleotide Sequence	ATGGTCAAGATCTCCATGGACGTGTTCGTGCGCATCCTGCAGCCCGAGCGCTACGAGCTGTGGAAGCAGGGCAAGGACCTCACGGTGCTGGACCACACGCGGCCCACGGCGCTCACCAGCCCCGAGCTGAGCTCCTGGAGTGCATCCCGGGCCTCGCTGAAGGCCAAGCTCCTCCGCAGGAGTGCTGCCTGTGCAACCTGCGAGGAGGTGCGCTGCAGATGA

CircID	chr19:5110622\|5138070
ORF Type	ORF2
Protein Length	70
Nucleotide Length	210
Protein Sequence	MALMSTGWRSITFRKRASGTAMAQITWIHLLSVVICSAPPRRLHRQHSCGGAWPSARPGMHSRSSARGW*
Nucleotide Sequence	ATGGCGCTGATGTCCACAGGGTGGCGCTCAATCACGTTCAGGAAGCGCGCCTCGGGGACTGCGATGGCACAGATCACGTGGATCCACCTCCTATCGGTGGTCATCTGCAGCGCACCTCCTCGCAGGTTGCACAGGCAGCACTCCTGCGGAGGAGCTTGGCCTTCAGCGAGGCCCGGGATGCACTCCAGGAGCTCAGCTCGGGGCTGGTGA

CircID	chr19:5110622\|5138070
ORF Type	ORF3
Protein Length	119
Nucleotide Length	357
Protein Sequence	VPEGHGQDLHGRVRAHPAARALRAVEAGQGPHGAGPHAAHGAHQPRAELLECIPGLAEGQAPPQECCLCNLRGGALQMTTDRRWIHVICAIAVPEARFLNVIERHPVDISAIPEQRWKL
Nucleotide Sequence	GTGCCGGAAGGACATGGTCAAGATCTCCATGGACGTGTTCGTGCGCATCCTGCAGCCCGAGCGCTACGAGCTGTGGAAGCAGGGCAAGGACCTCACGGTGCTGGACCACACGCGGCCCACGGCGCTCACCAGCCCCGAGCTGAGCTCCTGGAGTGCATCCCGGGCCTCGCTGAAGGCCAAGCTCCTCCGCAGGAGTGCTGCCTGTGCAACCTGCGAGGAGGTGCGCTGCAGATGACCACCGATAGGAGGTGGATCCACGTGATCTGTGCCATCGCAGTCCCCGAGGCGCGCTTCCTGAACGTGATTGAGCGCCACCCTGTGGACATCAGCGCCATCCCCGAGCAGCGGTGGAAGCTG

CircID	chr19:5110622\|5138070
ORF Type	ORF4
Protein Length	84
Nucleotide Length	252
Protein Sequence	VALNHVQEARLGDCDGTDHVDPPPIGGHLQRTSSQVAQAALLRRSLAFSEARDALQELSSGLVSAVGRVWSSTVRSLPCFHSS*
Nucleotide Sequence	GTGGCGCTCAATCACGTTCAGGAAGCGCGCCTCGGGGACTGCGATGGCACAGATCACGTGGATCCACCTCCTATCGGTGGTCATCTGCAGCGCACCTCCTCGCAGGTTGCACAGGCAGCACTCCTGCGGAGGAGCTTGGCCTTCAGCGAGGCCCGGGATGCACTCCAGGAGCTCAGCTCGGGGCTGGTGAGCGCCGTGGGCCGCGTGTGGTCCAGCACCGTGAGGTCCTTGCCCTGCTTCCACAGCTCGTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr19:5110622\|5138070	GTF2F1	1	0	0
chr19:5110622\|5138070	U2AF2	3	4	0
chr19:5110622\|5138070	ELAVL1	0	0	1
chr19:5110622\|5138070	SF3B4	4	0	0
chr19:5110622\|5138070	TBRG4	1	0	0
chr19:5110622\|5138070	PRPF8	0	1	0
chr19:5110622\|5138070	DHX30	3	0	0
chr19:5110622\|5138070	YTHDF1	1	0	0
chr19:5110622\|5138070	RPS3	0	0	1
chr19:5110622\|5138070	DDX54	2	0	0
chr19:5110622\|5138070	TAF15	1	0	0
chr19:5110622\|5138070	FMR1	2	0	13
chr19:5110622\|5138070	NUDT21	0	1	0
chr19:5110622\|5138070	RBM15B	1	0	0
chr19:5110622\|5138070	FUS	9	3	0
chr19:5110622\|5138070	DGCR8	1	1	0
chr19:5110622\|5138070	DROSHA	2	0	0
chr19:5110622\|5138070	SRSF1	0	0	2
chr19:5110622\|5138070	NONO	7	0	0
chr19:5110622\|5138070	NOP56	1	2	0
chr19:5110622\|5138070	ZNF622	0	0	1
chr19:5110622\|5138070	EIF3G	1	0	0
chr19:5110622\|5138070	EFTUD2	1	0	1
chr19:5110622\|5138070	GRWD1	0	0	2
chr19:5110622\|5138070	SF3A3	2	0	0
chr19:5110622\|5138070	FIP1L1	2	0	0
chr19:5110622\|5138070	PTBP1	3	1	0
chr19:5110622\|5138070	HNRNPC	9	0	0
chr19:5110622\|5138070	TRA2A	1	0	0
chr19:5110622\|5138070	LARP4	1	0	0
chr19:5110622\|5138070	SMNDC1	1	0	0
chr19:5110622\|5138070	MSI1	3	1	0
chr19:5110622\|5138070	HNRNPA1	1	2	0
chr19:5110622\|5138070	LIN28B	1	0	0
chr19:5110622\|5138070	FXR1	0	0	2
chr19:5110622\|5138070	FXR2	0	0	9
chr19:5110622\|5138070	FASTKD2	1	0	0
chr19:5110622\|5138070	IGF2BP2	1	2	1
chr19:5110622\|5138070	BUD13	3	0	2
chr19:5110622\|5138070	DDX24	2	0	2
chr19:5110622\|5138070	SLTM	3	0	0
chr19:5110622\|5138070	AARS	1	0	0
chr19:5110622\|5138070	CSTF2T	2	1	0
chr19:5110622\|5138070	GEMIN5	1	0	0
chr19:5110622\|5138070	RBM22	1	1	0
chr19:5110622\|5138070	YBX3	1	0	0
chr19:5110622\|5138070	DKC1	1	0	0
chr19:5110622\|5138070	PPIG	0	1	5
chr19:5110622\|5138070	AGO2	1	3	0
chr19:5110622\|5138070	EWSR1	11	0	0
chr19:5110622\|5138070	EIF4A3	3	1	6
chr19:5110622\|5138070	FBL	0	1	1

CircRNA Information