CircRNA Information

General Information
circRNA Basic Information
CircID chr19:51354351|51354488
Strand +
CircType exon
Host Gene ENSG00000105379.8;
Algorism CIRI2;
Sequence CTGCCCCTGCCTACAAACTCTAACCCAGTTCTGTCCCTGGAGCTGTGTGACCCCGGACAAGGCCCTGCCCCTTTCCAGGCTGTCGTTGTCCTCATCCAGCCTGGGAGAGGGTTGGCGCTGAGGCCCCCACCTTCTTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:51354351|51354488 hsa-miR-150-5p 0 0 1
chr19:51354351|51354488 hsa-miR-150-3p 0 0 1
chr19:51354351|51354488 hsa-miR-377-5p 0 0 1
chr19:51354351|51354488 hsa-miR-377-3p 0 0 1
chr19:51354351|51354488 hsa-miR-940 1 0 1
chr19:51354351|51354488 hsa-miR-1287-5p 0 0 1
chr19:51354351|51354488 hsa-miR-1287-3p 0 0 1
chr19:51354351|51354488 hsa-miR-1255a 0 0 1
chr19:51354351|51354488 hsa-miR-1224-5p 0 0 1
chr19:51354351|51354488 hsa-miR-486-3p 0 0 1
chr19:51354351|51354488 hsa-miR-532-3p 0 0 1
chr19:51354351|51354488 hsa-miR-875-3p 0 0 1
chr19:51354351|51354488 hsa-miR-1207-5p 1 0 1
chr19:51354351|51354488 hsa-miR-1255b 0 0 1
chr19:51354351|51354488 hsa-miR-1254 0 0 1
chr19:51354351|51354488 hsa-miR-663a 1 0 0
chr19:51354351|51354488 hsa-miR-762 1 0 0
chr19:51354351|51354488 hsa-miR-1231 1 0 0
chr19:51354351|51354488 hsa-miR-3196 1 0 0
chr19:51354351|51354488 hsa-miR-4298 1 0 0
chr19:51354351|51354488 hsa-miR-4430 0 1 0
chr19:51354351|51354488 hsa-miR-4463 1 0 0
chr19:51354351|51354488 hsa-miR-4505 1 0 0
chr19:51354351|51354488 hsa-miR-4507 1 0 0
chr19:51354351|51354488 hsa-miR-4539 1 0 0
chr19:51354351|51354488 hsa-miR-4688 1 1 0
chr19:51354351|51354488 hsa-miR-5090 1 0 0
chr19:51354351|51354488 hsa-miR-6132 1 0 0
chr19:51354351|51354488 hsa-miR-8089 1 0 0
chr19:51354351|51354488 hsa-miR-211-3p 1 1 0
chr19:51354351|51354488 hsa-miR-4433b-3p 1 0 0
chr19:51354351|51354488 hsa-miR-4433a-3p 1 0 0
chr19:51354351|51354488 hsa-miR-6861-5p 1 0 0
chr19:51354351|51354488 hsa-miR-6892-3p 0 1 0
chr19:51354351|51354488 hsa-miR-6890-5p 1 0 0
chr19:51354351|51354488 hsa-miR-6820-5p 1 0 0
chr19:51354351|51354488 hsa-miR-6806-5p 0 1 0
chr19:51354351|51354488 hsa-miR-6721-5p 1 1 0
chr19:51354351|51354488 hsa-miR-4655-5p 1 0 0
chr19:51354351|51354488 hsa-miR-197-5p 1 0 0
chr19:51354351|51354488 hsa-miR-432-5p 1 0 0
chr19:51354351|51354488 hsa-miR-7845-5p 1 1 0
chr19:51354351|51354488 hsa-miR-3180-3p 1 0 0
chr19:51354351|51354488 hsa-miR-6810-5p 0 1 0
chr19:51354351|51354488 hsa-miR-1226-5p 1 1 0
chr19:51354351|51354488 hsa-miR-1229-5p 1 0 0
chr19:51354351|51354488 hsa-miR-4640-5p 1 0 0
chr19:51354351|51354488 hsa-miR-6753-5p 0 1 0
chr19:51354351|51354488 hsa-miR-92b-5p 1 0 0
chr19:51354351|51354488 hsa-miR-3202 0 1 0
chr19:51354351|51354488 hsa-miR-149-3p 1 0 0
chr19:51354351|51354488 hsa-miR-7112-5p 1 0 0
chr19:51354351|51354488 hsa-miR-744-5p 1 0 0
chr19:51354351|51354488 hsa-miR-7113-5p 0 1 0
chr19:51354351|51354488 hsa-miR-4763-3p 1 1 0
chr19:51354351|51354488 hsa-miR-6816-5p 1 0 0
chr19:51354351|51354488 hsa-miR-6775-5p 1 0 0
chr19:51354351|51354488 hsa-miR-3180 1 0 0
chr19:51354351|51354488 hsa-miR-6743-5p 1 1 0
chr19:51354351|51354488 hsa-miR-6754-5p 1 0 0
chr19:51354351|51354488 hsa-miR-6813-5p 1 0 0
chr19:51354351|51354488 hsa-miR-7107-5p 1 1 0
chr19:51354351|51354488 hsa-miR-6722-3p 1 0 0
chr19:51354351|51354488 hsa-miR-6879-5p 1 0 0
chr19:51354351|51354488 hsa-miR-3620-5p 1 0 0
chr19:51354351|51354488 hsa-miR-5196-5p 1 0 0
chr19:51354351|51354488 hsa-miR-6836-5p 1 1 0
chr19:51354351|51354488 hsa-miR-10396a-5p 1 0 0
chr19:51354351|51354488 hsa-miR-10396b-5p 1 0 0
chr19:51354351|51354488 hsa-miR-4685-5p 1 0 0
chr19:51354351|51354488 hsa-miR-4725-3p 1 0 0
chr19:51354351|51354488 hsa-miR-4749-5p 1 0 0
chr19:51354351|51354488 hsa-miR-6848-5p 1 0 0
chr19:51354351|51354488 hsa-miR-6511a-5p 1 0 0
chr19:51354351|51354488 hsa-miR-3116 0 1 0
chr19:51354351|51354488 hsa-miR-3679-5p 1 1 0
chr19:51354351|51354488 hsa-miR-4747-5p 0 1 0
chr19:51354351|51354488 hsa-miR-320a-3p 1 0 0
chr19:51354351|51354488 hsa-miR-320b 1 0 0
chr19:51354351|51354488 hsa-miR-320c 1 0 0
chr19:51354351|51354488 hsa-miR-320d 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr19:51354351|51354488
ORF Type ORF1
Protein Length 46
Nucleotide Length 138
Protein Sequence LPLPTNSNPVLSLELCDPGQGPAPFQAVVVLIQPGRGLALRPPPSC
Nucleotide Sequence CTGCCCCTGCCTACAAACTCTAACCCAGTTCTGTCCCTGGAGCTGTGTGACCCCGGACAAGGCCCTGCCCCTTTCCAGGCTGTCGTTGTCCTCATCCAGCCTGGGAGAGGGTTGGCGCTGAGGCCCCCACCTTCTTGC
CircID chr19:51354351|51354488
ORF Type ORF2
Protein Length 33
Nucleotide Length 99
Protein Sequence MDEDNDSLERGRALSGVTQLQGQNWVRVCRQGQ
Nucleotide Sequence CTGGATGAGGACAACGACAGCCTGGAAAGGGGCAGGGCCTTGTCCGGGGTCACACAGCTCCAGGGACAGAACTGGGTTAGAGTTTGTAGGCAGGGGCAG
CircID chr19:51354351|51354488
ORF Type ORF3
Protein Length 31
Nucleotide Length 93
Protein Sequence MRTTTAWKGAGPCPGSHSSRDRTGLEFVGRG
Nucleotide Sequence ATGAGGACAACGACAGCCTGGAAAGGGGCAGGGCCTTGTCCGGGGTCACACAGCTCCAGGGACAGAACTGGGTTAGAGTTTGTAGGCAGGGGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab