CircNet

General Information

circRNA Basic Information

CircID	chr19:52216529\|52219730
Strand	+
CircType	exon
Host Gene	ENSG00000105568.16;
Algorism	CIRI2;
Sequence	AGTCCAGGTTAGAGATGATGTTCAGCCGTACCTCAGGGCACTCATCCTTCAGCTGAGCCAGGAAGAGGGGCAAGAGGTGCTCGATGGTGTTGTCTTTGCCCAAGATGGGAGAGAGACCCATGATGACTGAGGCCAGGGCAGACTTGACATGTTGGTTGGCATCGGACACCAGCTC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:52216529\|52219730	hsa-let-7b-5p	0	0	1
chr19:52216529\|52219730	hsa-let-7b-3p	0	0	1
chr19:52216529\|52219730	hsa-let-7c-5p	0	0	1
chr19:52216529\|52219730	hsa-let-7c-3p	0	0	1
chr19:52216529\|52219730	hsa-let-7d-5p	0	0	1
chr19:52216529\|52219730	hsa-let-7d-3p	0	0	1
chr19:52216529\|52219730	hsa-let-7e-5p	0	0	1
chr19:52216529\|52219730	hsa-let-7e-3p	0	0	1
chr19:52216529\|52219730	hsa-miR-98-5p	0	0	1
chr19:52216529\|52219730	hsa-miR-98-3p	0	0	1
chr19:52216529\|52219730	hsa-let-7g-5p	0	0	1
chr19:52216529\|52219730	hsa-let-7g-3p	0	0	1
chr19:52216529\|52219730	hsa-let-7i-5p	0	0	1
chr19:52216529\|52219730	hsa-let-7i-3p	0	0	1
chr19:52216529\|52219730	hsa-miR-149-5p	0	0	1
chr19:52216529\|52219730	hsa-miR-149-3p	0	0	1
chr19:52216529\|52219730	hsa-miR-150-5p	0	0	1
chr19:52216529\|52219730	hsa-miR-150-3p	0	0	1
chr19:52216529\|52219730	hsa-miR-346	0	0	1
chr19:52216529\|52219730	hsa-miR-422a	0	0	1
chr19:52216529\|52219730	hsa-miR-202-5p	0	0	1
chr19:52216529\|52219730	hsa-miR-202-3p	0	0	1
chr19:52216529\|52219730	hsa-miR-619-5p	0	0	1
chr19:52216529\|52219730	hsa-miR-619-3p	0	0	1
chr19:52216529\|52219730	hsa-miR-635	0	1	1
chr19:52216529\|52219730	hsa-miR-649	0	0	1
chr19:52216529\|52219730	hsa-miR-874-5p	0	0	1
chr19:52216529\|52219730	hsa-miR-874-3p	0	0	1
chr19:52216529\|52219730	hsa-miR-1236-5p	0	0	1
chr19:52216529\|52219730	hsa-miR-1236-3p	0	0	1
chr19:52216529\|52219730	hsa-miR-1255a	0	0	1
chr19:52216529\|52219730	hsa-miR-1252-5p	0	0	1
chr19:52216529\|52219730	hsa-miR-1252-3p	0	0	1
chr19:52216529\|52219730	hsa-miR-532-3p	0	0	1
chr19:52216529\|52219730	hsa-miR-193a-5p	0	0	1
chr19:52216529\|52219730	hsa-miR-146b-3p	0	0	1
chr19:52216529\|52219730	hsa-miR-490-3p	0	0	1
chr19:52216529\|52219730	hsa-miR-1207-3p	0	0	1
chr19:52216529\|52219730	hsa-miR-324-3p	0	0	1
chr19:52216529\|52219730	hsa-miR-125a-5p	0	0	1
chr19:52216529\|52219730	hsa-miR-125b	0	0	1
chr19:52216529\|52219730	hsa-miR-1255b	0	0	1
chr19:52216529\|52219730	hsa-miR-1308	0	0	1
chr19:52216529\|52219730	hsa-miR-378	0	0	1
chr19:52216529\|52219730	hsa-miR-138	0	0	1
chr19:52216529\|52219730	hsa-let-7a	0	0	1
chr19:52216529\|52219730	hsa-let-7f	0	0	1
chr19:52216529\|52219730	hsa-miR-24	0	0	1
chr19:52216529\|52219730	hsa-miR-609	1	0	0
chr19:52216529\|52219730	hsa-miR-762	0	1	0
chr19:52216529\|52219730	hsa-miR-544b	0	1	0
chr19:52216529\|52219730	hsa-miR-138-5p	0	1	0
chr19:52216529\|52219730	hsa-miR-181a-3p	0	1	0
chr19:52216529\|52219730	hsa-miR-181c-3p	0	1	0
chr19:52216529\|52219730	hsa-miR-24-3p	0	1	0
chr19:52216529\|52219730	hsa-miR-6875-3p	0	1	0
chr19:52216529\|52219730	hsa-miR-6873-3p	0	1	0
chr19:52216529\|52219730	hsa-miR-7110-3p	0	1	0
chr19:52216529\|52219730	hsa-miR-6728-3p	1	0	0
chr19:52216529\|52219730	hsa-miR-6878-3p	1	0	0
chr19:52216529\|52219730	hsa-miR-4646-3p	0	1	0
chr19:52216529\|52219730	hsa-miR-6813-3p	1	0	0
chr19:52216529\|52219730	hsa-miR-6895-3p	0	1	0
chr19:52216529\|52219730	hsa-miR-5088-3p	1	1	0
chr19:52216529\|52219730	hsa-miR-6839-3p	0	1	0
chr19:52216529\|52219730	hsa-miR-6774-5p	0	1	0
chr19:52216529\|52219730	hsa-miR-122b-3p	0	1	0
chr19:52216529\|52219730	hsa-miR-4653-5p	0	1	0
chr19:52216529\|52219730	hsa-miR-21-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:52216529\|52219730
ORF Type	ORF1
Protein Length	25
Nucleotide Length	78
Protein Sequence	MSQEEGQEVLDGVVFAQDGRETHDD
Nucleotide Sequence	CTGAGCCAGGAAGAGGGGCAAGAGGTGCTCGATGGTGTTGTCTTTGCCCAAGATGGGAGAGAGACCCATGATGACTGA

CircID	chr19:52216529\|52219730
ORF Type	ORF2
Protein Length	30
Nucleotide Length	90
Protein Sequence	MVLSLPKMGERPMMTEARADLTCWLASDTS
Nucleotide Sequence	ATGGTGTTGTCTTTGCCCAAGATGGGAGAGAGACCCATGATGACTGAGGCCAGGGCAGACTTGACATGTTGGTTGGCATCGGACACCAGC

CircID	chr19:52216529\|52219730
ORF Type	ORF3
Protein Length	57
Nucleotide Length	171
Protein Sequence	MVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLD
Nucleotide Sequence	CTGGTGTCCGATGCCAACCAACATGTCAAGTCTGCCCTGGCCTCAGTCATCATGGGTCTCTCTCCCATCTTGGGCAAAGACAACACCATCGAGCACCTCTTGCCCCTCTTCCTGGCTCAGCTGAAGGATGAGTGCCCTGAGGTACGGCTGAACATCATCTCTAACCTGGAC

CircID	chr19:52216529\|52219730
ORF Type	ORF4
Protein Length	37
Nucleotide Length	114
Protein Sequence	MPTNMSSLPWPQSSWVSLPSWAKTTPSSTSCPSSWLS
Nucleotide Sequence	ATGCCAACCAACATGTCAAGTCTGCCCTGGCCTCAGTCATCATGGGTCTCTCTCCCATCTTGGGCAAAGACAACACCATCGAGCACCTCTTGCCCCTCTTCCTGGCTCAGCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information