CircRNA Information

General Information
circRNA Basic Information
CircID chr19:54114581|54115278
Strand -
CircType exon
Host Gene ENSG00000105619.12;
Algorism CIRI2;
Sequence ACAAACTCCACTTCCGTCTCCAGCTCGCTCTCCAGGATGTGGCCACCAAATAGGGGAGGCAACGCCAACTCTGAGCCTGGCGGCGCTGAGAACTCCTCAAAGCCCACGGCTGCCATGGTCCCTTCTCTCTGCTCCAATTCCATCTCCGCGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:54114581|54115278 hsa-miR-185-5p 0 0 1
chr19:54114581|54115278 hsa-miR-185-3p 0 0 1
chr19:54114581|54115278 hsa-miR-484 0 0 1
chr19:54114581|54115278 hsa-miR-571 0 0 1
chr19:54114581|54115278 hsa-miR-588 0 0 1
chr19:54114581|54115278 hsa-miR-591 0 0 1
chr19:54114581|54115278 hsa-miR-1304-5p 0 0 1
chr19:54114581|54115278 hsa-miR-1304-3p 0 0 1
chr19:54114581|54115278 hsa-miR-1224-5p 0 0 1
chr19:54114581|54115278 hsa-miR-885-3p 0 0 1
chr19:54114581|54115278 hsa-miR-24 0 0 1
chr19:54114581|54115278 hsa-miR-658 1 0 0
chr19:54114581|54115278 hsa-miR-762 1 0 0
chr19:54114581|54115278 hsa-miR-765 1 0 0
chr19:54114581|54115278 hsa-miR-936 1 0 0
chr19:54114581|54115278 hsa-miR-1270 1 0 0
chr19:54114581|54115278 hsa-miR-4296 1 0 0
chr19:54114581|54115278 hsa-miR-4298 1 0 0
chr19:54114581|54115278 hsa-miR-4322 1 0 0
chr19:54114581|54115278 hsa-miR-3652 1 0 0
chr19:54114581|54115278 hsa-miR-3916 1 0 0
chr19:54114581|54115278 hsa-miR-4430 1 0 0
chr19:54114581|54115278 hsa-miR-3135b 1 0 0
chr19:54114581|54115278 hsa-miR-4479 1 0 0
chr19:54114581|54115278 hsa-miR-4516 1 0 0
chr19:54114581|54115278 hsa-miR-4538 1 0 0
chr19:54114581|54115278 hsa-miR-4644 1 0 0
chr19:54114581|54115278 hsa-miR-4656 1 0 0
chr19:54114581|54115278 hsa-miR-4688 1 0 0
chr19:54114581|54115278 hsa-miR-4689 1 0 0
chr19:54114581|54115278 hsa-miR-4706 1 0 0
chr19:54114581|54115278 hsa-miR-4730 1 0 0
chr19:54114581|54115278 hsa-miR-4784 1 0 0
chr19:54114581|54115278 hsa-miR-5090 1 0 0
chr19:54114581|54115278 hsa-miR-5739 1 0 0
chr19:54114581|54115278 hsa-miR-6081 1 0 0
chr19:54114581|54115278 hsa-miR-6090 1 0 0
chr19:54114581|54115278 hsa-miR-8073 1 0 0
chr19:54114581|54115278 hsa-miR-8085 1 0 0
chr19:54114581|54115278 hsa-miR-8089 1 0 0
chr19:54114581|54115278 hsa-miR-9901 1 0 0
chr19:54114581|54115278 hsa-miR-12115 1 0 0
chr19:54114581|54115278 hsa-miR-4726-3p 1 0 0
chr19:54114581|54115278 hsa-miR-6825-5p 1 0 0
chr19:54114581|54115278 hsa-miR-25-5p 1 0 0
chr19:54114581|54115278 hsa-miR-6728-5p 1 0 0
chr19:54114581|54115278 hsa-miR-1227-5p 1 0 0
chr19:54114581|54115278 hsa-miR-6757-5p 1 0 0
chr19:54114581|54115278 hsa-miR-6746-5p 1 0 0
chr19:54114581|54115278 hsa-miR-6820-5p 1 0 0
chr19:54114581|54115278 hsa-miR-6727-5p 1 0 0
chr19:54114581|54115278 hsa-miR-7845-5p 1 0 0
chr19:54114581|54115278 hsa-miR-3605-5p 1 0 0
chr19:54114581|54115278 hsa-miR-6716-5p 1 0 0
chr19:54114581|54115278 hsa-miR-3151-5p 1 0 0
chr19:54114581|54115278 hsa-miR-6760-5p 1 0 0
chr19:54114581|54115278 hsa-miR-6514-5p 1 0 0
chr19:54114581|54115278 hsa-miR-4640-5p 1 0 0
chr19:54114581|54115278 hsa-miR-6753-5p 1 0 0
chr19:54114581|54115278 hsa-miR-4764-5p 1 0 0
chr19:54114581|54115278 hsa-miR-1908-5p 1 0 0
chr19:54114581|54115278 hsa-miR-4756-3p 1 0 0
chr19:54114581|54115278 hsa-miR-92b-5p 1 0 0
chr19:54114581|54115278 hsa-miR-4776-5p 1 0 0
chr19:54114581|54115278 hsa-miR-1225-5p 1 0 0
chr19:54114581|54115278 hsa-miR-3619-3p 1 0 0
chr19:54114581|54115278 hsa-miR-744-5p 1 0 0
chr19:54114581|54115278 hsa-miR-503-3p 1 0 0
chr19:54114581|54115278 hsa-miR-10400-5p 1 0 0
chr19:54114581|54115278 hsa-miR-6865-5p 1 0 0
chr19:54114581|54115278 hsa-miR-1343-5p 1 0 0
chr19:54114581|54115278 hsa-miR-5001-5p 1 0 0
chr19:54114581|54115278 hsa-miR-6726-5p 1 0 0
chr19:54114581|54115278 hsa-miR-6743-5p 1 0 0
chr19:54114581|54115278 hsa-miR-6851-5p 1 0 0
chr19:54114581|54115278 hsa-miR-7107-5p 1 0 0
chr19:54114581|54115278 hsa-miR-1249-5p 1 0 0
chr19:54114581|54115278 hsa-miR-6763-5p 1 0 0
chr19:54114581|54115278 hsa-miR-6797-5p 1 0 0
chr19:54114581|54115278 hsa-miR-6879-5p 1 0 0
chr19:54114581|54115278 hsa-miR-5196-5p 1 0 0
chr19:54114581|54115278 hsa-miR-6780b-5p 1 0 0
chr19:54114581|54115278 hsa-miR-10396a-5p 1 0 0
chr19:54114581|54115278 hsa-miR-4632-5p 1 0 0
chr19:54114581|54115278 hsa-miR-4726-5p 1 0 0
chr19:54114581|54115278 hsa-miR-4749-5p 1 0 0
chr19:54114581|54115278 hsa-miR-6735-5p 1 0 0
chr19:54114581|54115278 hsa-miR-675-5p 1 0 0
chr19:54114581|54115278 hsa-miR-6846-5p 1 0 0
chr19:54114581|54115278 hsa-miR-6848-5p 1 0 0
chr19:54114581|54115278 hsa-miR-6858-5p 1 0 0
chr19:54114581|54115278 hsa-miR-939-5p 1 0 0
chr19:54114581|54115278 hsa-miR-365b-5p 1 0 0
chr19:54114581|54115278 hsa-miR-3085-5p 1 0 0
chr19:54114581|54115278 hsa-miR-6758-5p 1 0 0
chr19:54114581|54115278 hsa-miR-6856-5p 1 0 0
chr19:54114581|54115278 hsa-miR-10398-3p 1 0 0
chr19:54114581|54115278 hsa-miR-4646-5p 1 0 0
chr19:54114581|54115278 hsa-miR-541-3p 1 0 0
chr19:54114581|54115278 hsa-miR-6785-5p 1 0 0
chr19:54114581|54115278 hsa-miR-4667-5p 1 0 0
chr19:54114581|54115278 hsa-miR-6791-5p 1 0 0
chr19:54114581|54115278 hsa-miR-6762-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr19:54114581|54115278
ORF Type ORF1
Protein Length 38
Nucleotide Length 114
Protein Sequence MWPPNRGGNANSEPGGAENSSKPTAAMVPSLCSNSISA
Nucleotide Sequence ATGTGGCCACCAAATAGGGGAGGCAACGCCAACTCTGAGCCTGGCGGCGCTGAGAACTCCTCAAAGCCCACGGCTGCCATGGTCCCTTCTCTCTGCTCCAATTCCATCTCCGCG
CircID chr19:54114581|54115278
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MSLAALRTPQSPRLPWSLLSAPIPSPR
Nucleotide Sequence CTGAGCCTGGCGGCGCTGAGAACTCCTCAAAGCCCACGGCTGCCATGGTCCCTTCTCTCTGCTCCAATTCCATCTCCGCGA
CircID chr19:54114581|54115278
ORF Type ORF3
Protein Length 47
Nucleotide Length 141
Protein Sequence MELEQREGTMAAVGFEEFSAPPGSELALPPLFGGHILESELETEVEF
Nucleotide Sequence ATGGAATTGGAGCAGAGAGAAGGGACCATGGCAGCCGTGGGCTTTGAGGAGTTCTCAGCGCCGCCAGGCTCAGAGTTGGCGTTGCCTCCCCTATTTGGTGGCCACATCCTGGAGAGCGAGCTGGAGACGGAAGTGGAGTTT
CircID chr19:54114581|54115278
ORF Type ORF4
Protein Length 33
Nucleotide Length 99
Protein Sequence MRSSQRRQAQSWRCLPYLVATSWRASWRRKWSL
Nucleotide Sequence TTGAGGAGTTCTCAGCGCCGCCAGGCTCAGAGTTGGCGTTGCCTCCCCTATTTGGTGGCCACATCCTGGAGAGCGAGCTGGAGACGGAAGTGGAGTTTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab