CircRNA Information

General Information
circRNA Basic Information
CircID chr19:54128145|54128377
Strand +
CircType exon
Host Gene ENSG00000105618.12;
Algorism CIRI2;
Sequence CTCTCCGAAGCTCATACGGTTGGCCTGCTTCCGGATCTCCGTCAGCCCCAGCCGCTCCTTCATCTTGCGGTACCTGGGGACGGGTGGGTGGGCGGCGCCAGGGAGTCGGCTGGGAGGAGGACGCCGGCTTCTCCCCTCCATGACCCCCATGCCTACCGGACCCCCAGGGCCCCTCACCTGCGGCCGCCTCGCTTCTTCCGCTGTCCATCCAGGGGCGCAGGCAGCGGCTTCAC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:54128145|54128377 hsa-miR-637 0 0 1
chr19:54128145|54128377 hsa-miR-1291 0 0 1
chr19:54128145|54128377 hsa-miR-1247-5p 0 0 1
chr19:54128145|54128377 hsa-miR-1247-3p 0 0 1
chr19:54128145|54128377 hsa-miR-1252-5p 0 0 1
chr19:54128145|54128377 hsa-miR-1252-3p 0 0 1
chr19:54128145|54128377 hsa-miR-125a-3p 1 1 1
chr19:54128145|54128377 hsa-miR-615-5p 1 0 1
chr19:54128145|54128377 hsa-miR-423-5p 0 0 1
chr19:54128145|54128377 hsa-miR-566 0 0 1
chr19:54128145|54128377 hsa-miR-490-5p 0 0 1
chr19:54128145|54128377 hsa-miR-331-3p 0 0 1
chr19:54128145|54128377 hsa-miR-556-5p 0 0 1
chr19:54128145|54128377 hsa-miR-608 1 0 0
chr19:54128145|54128377 hsa-miR-658 1 0 0
chr19:54128145|54128377 hsa-miR-760 1 0 0
chr19:54128145|54128377 hsa-miR-1275 1 0 0
chr19:54128145|54128377 hsa-miR-1539 0 1 0
chr19:54128145|54128377 hsa-miR-3138 1 1 0
chr19:54128145|54128377 hsa-miR-3147 1 0 0
chr19:54128145|54128377 hsa-miR-3185 1 1 0
chr19:54128145|54128377 hsa-miR-3196 1 1 0
chr19:54128145|54128377 hsa-miR-3665 1 1 0
chr19:54128145|54128377 hsa-miR-3937 1 0 0
chr19:54128145|54128377 hsa-miR-4440 1 0 0
chr19:54128145|54128377 hsa-miR-4449 1 0 0
chr19:54128145|54128377 hsa-miR-4467 1 0 0
chr19:54128145|54128377 hsa-miR-4534 1 0 0
chr19:54128145|54128377 hsa-miR-3960 1 0 0
chr19:54128145|54128377 hsa-miR-4651 1 0 0
chr19:54128145|54128377 hsa-miR-4656 0 1 0
chr19:54128145|54128377 hsa-miR-4669 1 0 0
chr19:54128145|54128377 hsa-miR-4683 0 1 0
chr19:54128145|54128377 hsa-miR-4688 1 0 0
chr19:54128145|54128377 hsa-miR-4706 1 0 0
chr19:54128145|54128377 hsa-miR-5192 1 0 0
chr19:54128145|54128377 hsa-miR-5193 0 1 0
chr19:54128145|54128377 hsa-miR-5703 0 1 0
chr19:54128145|54128377 hsa-miR-5787 0 1 0
chr19:54128145|54128377 hsa-miR-6081 1 0 0
chr19:54128145|54128377 hsa-miR-6125 1 0 0
chr19:54128145|54128377 hsa-miR-6127 0 1 0
chr19:54128145|54128377 hsa-miR-6860 1 0 0
chr19:54128145|54128377 hsa-miR-7977 0 1 0
chr19:54128145|54128377 hsa-miR-9899 1 1 0
chr19:54128145|54128377 hsa-miR-12119 1 0 0
chr19:54128145|54128377 hsa-miR-12120 1 0 0
chr19:54128145|54128377 hsa-miR-4433b-3p 1 0 0
chr19:54128145|54128377 hsa-miR-6749-3p 0 1 0
chr19:54128145|54128377 hsa-miR-6734-5p 1 1 0
chr19:54128145|54128377 hsa-miR-323a-5p 1 0 0
chr19:54128145|54128377 hsa-miR-4665-3p 1 0 0
chr19:54128145|54128377 hsa-miR-6747-5p 1 0 0
chr19:54128145|54128377 hsa-miR-6765-5p 1 1 0
chr19:54128145|54128377 hsa-miR-6894-5p 1 0 0
chr19:54128145|54128377 hsa-miR-1972 0 1 0
chr19:54128145|54128377 hsa-miR-4687-3p 1 0 0
chr19:54128145|54128377 hsa-miR-8071 1 0 0
chr19:54128145|54128377 hsa-miR-6515-5p 0 1 0
chr19:54128145|54128377 hsa-miR-6089 1 0 0
chr19:54128145|54128377 hsa-miR-7847-3p 1 0 0
chr19:54128145|54128377 hsa-miR-6746-5p 1 1 0
chr19:54128145|54128377 hsa-miR-3622b-5p 1 1 0
chr19:54128145|54128377 hsa-miR-6806-5p 1 1 0
chr19:54128145|54128377 hsa-miR-7845-5p 1 0 0
chr19:54128145|54128377 hsa-miR-6716-5p 1 0 0
chr19:54128145|54128377 hsa-miR-3180-3p 1 0 0
chr19:54128145|54128377 hsa-miR-6793-5p 1 0 0
chr19:54128145|54128377 hsa-miR-185-3p 0 1 0
chr19:54128145|54128377 hsa-miR-3190-3p 1 0 0
chr19:54128145|54128377 hsa-miR-6798-5p 1 0 0
chr19:54128145|54128377 hsa-miR-3126-5p 1 0 0
chr19:54128145|54128377 hsa-miR-6760-5p 1 0 0
chr19:54128145|54128377 hsa-miR-2467-3p 1 0 0
chr19:54128145|54128377 hsa-miR-6782-5p 1 0 0
chr19:54128145|54128377 hsa-miR-6514-5p 1 0 0
chr19:54128145|54128377 hsa-miR-6882-3p 0 1 0
chr19:54128145|54128377 hsa-miR-6786-5p 1 0 0
chr19:54128145|54128377 hsa-miR-6852-5p 0 1 0
chr19:54128145|54128377 hsa-miR-7109-5p 1 0 0
chr19:54128145|54128377 hsa-miR-1226-5p 1 0 0
chr19:54128145|54128377 hsa-miR-7108-3p 0 1 0
chr19:54128145|54128377 hsa-miR-1229-5p 1 0 0
chr19:54128145|54128377 hsa-miR-193b-5p 1 0 0
chr19:54128145|54128377 hsa-miR-6894-3p 0 1 0
chr19:54128145|54128377 hsa-miR-885-3p 1 0 0
chr19:54128145|54128377 hsa-miR-7113-3p 0 1 0
chr19:54128145|54128377 hsa-miR-4690-5p 0 1 0
chr19:54128145|54128377 hsa-miR-3191-5p 0 1 0
chr19:54128145|54128377 hsa-miR-7854-3p 1 0 0
chr19:54128145|54128377 hsa-miR-7843-3p 0 1 0
chr19:54128145|54128377 hsa-miR-6886-5p 1 1 0
chr19:54128145|54128377 hsa-miR-6828-5p 0 1 0
chr19:54128145|54128377 hsa-miR-4632-3p 0 1 0
chr19:54128145|54128377 hsa-miR-2355-5p 0 1 0
chr19:54128145|54128377 hsa-miR-5189-3p 0 1 0
chr19:54128145|54128377 hsa-miR-4520-3p 0 1 0
chr19:54128145|54128377 hsa-miR-10400-5p 1 0 0
chr19:54128145|54128377 hsa-miR-1233-5p 1 0 0
chr19:54128145|54128377 hsa-miR-4763-3p 1 0 0
chr19:54128145|54128377 hsa-miR-6816-5p 1 0 0
chr19:54128145|54128377 hsa-miR-1343-5p 1 0 0
chr19:54128145|54128377 hsa-miR-6743-5p 1 0 0
chr19:54128145|54128377 hsa-miR-6752-5p 1 0 0
chr19:54128145|54128377 hsa-miR-6756-5p 1 0 0
chr19:54128145|54128377 hsa-miR-6803-5p 1 1 0
chr19:54128145|54128377 hsa-miR-6851-5p 1 0 0
chr19:54128145|54128377 hsa-miR-7110-5p 1 0 0
chr19:54128145|54128377 hsa-miR-1249-5p 1 0 0
chr19:54128145|54128377 hsa-miR-6751-5p 1 1 0
chr19:54128145|54128377 hsa-miR-6797-5p 1 0 0
chr19:54128145|54128377 hsa-miR-4728-5p 1 1 0
chr19:54128145|54128377 hsa-miR-328-5p 1 0 0
chr19:54128145|54128377 hsa-miR-4632-5p 1 0 0
chr19:54128145|54128377 hsa-miR-4649-5p 1 0 0
chr19:54128145|54128377 hsa-miR-4745-5p 1 0 0
chr19:54128145|54128377 hsa-miR-6795-5p 1 0 0
chr19:54128145|54128377 hsa-miR-6846-5p 1 0 0
chr19:54128145|54128377 hsa-miR-6848-5p 1 0 0
chr19:54128145|54128377 hsa-miR-6887-5p 1 0 0
chr19:54128145|54128377 hsa-miR-3187-5p 1 0 0
chr19:54128145|54128377 hsa-miR-1914-3p 1 0 0
chr19:54128145|54128377 hsa-miR-6791-5p 1 1 0
chr19:54128145|54128377 hsa-miR-6762-5p 1 0 0
chr19:54128145|54128377 hsa-miR-10400-3p 1 0 0
chr19:54128145|54128377 hsa-miR-7114-3p 0 1 0
chr19:54128145|54128377 hsa-miR-3619-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr19:54128145|54128377
ORF Type ORF1
Protein Length 69
Nucleotide Length 207
Protein Sequence MLPDLRQPQPLLHLAVPGDGWVGGARESAGRRTPASPLHDPHAYRTPRAPHLRPPRFFRCPSRGAGSGF
Nucleotide Sequence CTGCTTCCGGATCTCCGTCAGCCCCAGCCGCTCCTTCATCTTGCGGTACCTGGGGACGGGTGGGTGGGCGGCGCCAGGGAGTCGGCTGGGAGGAGGACGCCGGCTTCTCCCCTCCATGACCCCCATGCCTACCGGACCCCCAGGGCCCCTCACCTGCGGCCGCCTCGCTTCTTCCGCTGTCCATCCAGGGGCGCAGGCAGCGGCTTC
CircID chr19:54128145|54128377
ORF Type ORF2
Protein Length 71
Nucleotide Length 213
Protein Sequence MACFRISVSPSRSFILRYLGTGGWAAPGSRLGGGRRLLPSMTPMPTGPPGPLTCGRLASSAVHPGAQAAAS
Nucleotide Sequence TTGGCCTGCTTCCGGATCTCCGTCAGCCCCAGCCGCTCCTTCATCTTGCGGTACCTGGGGACGGGTGGGTGGGCGGCGCCAGGGAGTCGGCTGGGAGGAGGACGCCGGCTTCTCCCCTCCATGACCCCCATGCCTACCGGACCCCCAGGGCCCCTCACCTGCGGCCGCCTCGCTTCTTCCGCTGTCCATCCAGGGGCGCAGGCAGCGGCTTCA
CircID chr19:54128145|54128377
ORF Type ORF3
Protein Length 73
Nucleotide Length 219
Protein Sequence MRPWMDSGRSEAAAGEGPWGSGRHGGHGGEKPASSSQPTPWRRPPTRPQVPQDEGAAGADGDPEAGQPYELRR
Nucleotide Sequence CTGCGCCCCTGGATGGACAGCGGAAGAAGCGAGGCGGCCGCAGGTGAGGGGCCCTGGGGGTCCGGTAGGCATGGGGGTCATGGAGGGGAGAAGCCGGCGTCCTCCTCCCAGCCGACTCCCTGGCGCCGCCCACCCACCCGTCCCCAGGTACCGCAAGATGAAGGAGCGGCTGGGGCTGACGGAGATCCGGAAGCAGGCCAACCGTATGAGCTTCGGAGA
CircID chr19:54128145|54128377
ORF Type ORF4
Protein Length 50
Nucleotide Length 150
Protein Sequence MGVMEGRSRRPPPSRLPGAAHPPVPRYRKMKERLGLTEIRKQANRMSFGE
Nucleotide Sequence ATGGGGGTCATGGAGGGGAGAAGCCGGCGTCCTCCTCCCAGCCGACTCCCTGGCGCCGCCCACCCACCCGTCCCCAGGTACCGCAAGATGAAGGAGCGGCTGGGGCTGACGGAGATCCGGAAGCAGGCCAACCGTATGAGCTTCGGAGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab