CircRNA Information

General Information
circRNA Basic Information
CircID chr19:54145727|54146043
Strand +
CircType exon
Host Gene ENSG00000088038.16;
Algorism CIRI2;
Sequence CGTGGTACAGTTGGCTGGGCTGGGCGGGATGGGAGAGCTGGAGGTGGTTGAGGTGGGCGTGCTGCTGGACTGGTTGAAGATCTCATCCTCCATGTGGCTGTGGCTGGGGGGGGAGGTGGCGACCAGCGCCTGTGCTGTGGGGGCAGAAGAAGGGCATGCTTAGCTGGCTCACACAGCCCATTCTGGGCCCTCACTTCCTGTGCCACGATCAGCCCCAGGGCCTCACGAATGTCCTCGAGGTCCAGGTCATCGTAGAGAAACTCGTTCTCCTCGAAGTCGGGGTCCTGGGATGAGTCAACATAGTACTCAACGTCGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:54145727|54146043 hsa-miR-15a-5p 0 0 1
chr19:54145727|54146043 hsa-miR-15a-3p 0 0 1
chr19:54145727|54146043 hsa-miR-15b-5p 0 0 1
chr19:54145727|54146043 hsa-miR-15b-3p 0 0 1
chr19:54145727|54146043 hsa-miR-150-5p 0 0 1
chr19:54145727|54146043 hsa-miR-150-3p 0 0 1
chr19:54145727|54146043 hsa-miR-195-5p 0 0 1
chr19:54145727|54146043 hsa-miR-195-3p 0 0 1
chr19:54145727|54146043 hsa-miR-424-5p 0 0 1
chr19:54145727|54146043 hsa-miR-424-3p 0 0 1
chr19:54145727|54146043 hsa-miR-492 0 0 1
chr19:54145727|54146043 hsa-miR-497-5p 0 0 1
chr19:54145727|54146043 hsa-miR-497-3p 0 0 1
chr19:54145727|54146043 hsa-miR-611 0 0 1
chr19:54145727|54146043 hsa-miR-619-5p 0 0 1
chr19:54145727|54146043 hsa-miR-619-3p 0 0 1
chr19:54145727|54146043 hsa-miR-631 0 0 1
chr19:54145727|54146043 hsa-miR-766-5p 0 0 1
chr19:54145727|54146043 hsa-miR-766-3p 0 0 1
chr19:54145727|54146043 hsa-miR-765 0 0 1
chr19:54145727|54146043 hsa-miR-938 0 0 1
chr19:54145727|54146043 hsa-miR-1204 0 0 1
chr19:54145727|54146043 hsa-miR-1291 0 0 1
chr19:54145727|54146043 hsa-miR-1248 0 1 1
chr19:54145727|54146043 hsa-miR-1255a 0 0 1
chr19:54145727|54146043 hsa-miR-532-3p 0 0 1
chr19:54145727|54146043 hsa-miR-361-3p 0 0 1
chr19:54145727|54146043 hsa-miR-1224-3p 1 0 1
chr19:54145727|54146043 hsa-miR-338-3p 0 0 1
chr19:54145727|54146043 hsa-miR-324-3p 0 0 1
chr19:54145727|54146043 hsa-miR-455-3p 0 0 1
chr19:54145727|54146043 hsa-miR-151-5p 0 0 1
chr19:54145727|54146043 hsa-miR-16 0 0 1
chr19:54145727|54146043 hsa-miR-1255b 0 0 1
chr19:54145727|54146043 hsa-miR-762 1 0 0
chr19:54145727|54146043 hsa-miR-760 1 0 0
chr19:54145727|54146043 hsa-miR-1260a 1 0 0
chr19:54145727|54146043 hsa-miR-1281 1 1 0
chr19:54145727|54146043 hsa-miR-1913 1 1 0
chr19:54145727|54146043 hsa-miR-718 1 0 0
chr19:54145727|54146043 hsa-miR-3131 0 1 0
chr19:54145727|54146043 hsa-miR-4292 1 0 0
chr19:54145727|54146043 hsa-miR-3661 1 1 0
chr19:54145727|54146043 hsa-miR-4449 1 0 0
chr19:54145727|54146043 hsa-miR-4479 1 0 0
chr19:54145727|54146043 hsa-miR-4489 1 0 0
chr19:54145727|54146043 hsa-miR-4506 0 1 0
chr19:54145727|54146043 hsa-miR-4530 0 1 0
chr19:54145727|54146043 hsa-miR-1587 0 1 0
chr19:54145727|54146043 hsa-miR-4656 1 1 0
chr19:54145727|54146043 hsa-miR-4675 1 1 0
chr19:54145727|54146043 hsa-miR-4741 1 0 0
chr19:54145727|54146043 hsa-miR-5193 0 1 0
chr19:54145727|54146043 hsa-miR-5685 1 1 0
chr19:54145727|54146043 hsa-miR-6075 1 0 0
chr19:54145727|54146043 hsa-miR-7974 1 1 0
chr19:54145727|54146043 hsa-miR-9901 0 1 0
chr19:54145727|54146043 hsa-miR-197-3p 1 0 0
chr19:54145727|54146043 hsa-miR-6840-3p 0 1 0
chr19:54145727|54146043 hsa-miR-3157-5p 1 1 0
chr19:54145727|54146043 hsa-miR-6765-5p 1 0 0
chr19:54145727|54146043 hsa-miR-7106-5p 0 1 0
chr19:54145727|54146043 hsa-miR-6894-5p 0 1 0
chr19:54145727|54146043 hsa-miR-6720-5p 1 0 0
chr19:54145727|54146043 hsa-miR-3622a-5p 1 0 0
chr19:54145727|54146043 hsa-miR-6089 1 0 0
chr19:54145727|54146043 hsa-miR-6807-5p 0 1 0
chr19:54145727|54146043 hsa-miR-6746-5p 1 0 0
chr19:54145727|54146043 hsa-miR-145-5p 0 1 0
chr19:54145727|54146043 hsa-miR-6796-3p 1 1 0
chr19:54145727|54146043 hsa-miR-6768-5p 0 1 0
chr19:54145727|54146043 hsa-miR-5008-5p 1 1 0
chr19:54145727|54146043 hsa-miR-6788-3p 1 1 0
chr19:54145727|54146043 hsa-miR-4713-5p 0 1 0
chr19:54145727|54146043 hsa-miR-4436b-5p 1 0 0
chr19:54145727|54146043 hsa-miR-6884-3p 1 0 0
chr19:54145727|54146043 hsa-miR-5088-5p 0 1 0
chr19:54145727|54146043 hsa-miR-1226-5p 0 1 0
chr19:54145727|54146043 hsa-miR-4763-5p 1 0 0
chr19:54145727|54146043 hsa-miR-7108-3p 0 1 0
chr19:54145727|54146043 hsa-miR-1247-5p 1 1 0
chr19:54145727|54146043 hsa-miR-4707-3p 1 1 0
chr19:54145727|54146043 hsa-miR-1908-3p 1 0 0
chr19:54145727|54146043 hsa-miR-4691-3p 0 1 0
chr19:54145727|54146043 hsa-miR-4715-3p 1 0 0
chr19:54145727|54146043 hsa-miR-7161-3p 1 1 0
chr19:54145727|54146043 hsa-miR-4783-5p 1 0 0
chr19:54145727|54146043 hsa-miR-4717-3p 0 1 0
chr19:54145727|54146043 hsa-miR-4667-3p 1 1 0
chr19:54145727|54146043 hsa-miR-3690 0 1 0
chr19:54145727|54146043 hsa-miR-6776-3p 1 1 0
chr19:54145727|54146043 hsa-miR-1306-5p 1 1 0
chr19:54145727|54146043 hsa-miR-6825-3p 1 0 0
chr19:54145727|54146043 hsa-miR-3189-3p 0 1 0
chr19:54145727|54146043 hsa-miR-7160-3p 0 1 0
chr19:54145727|54146043 hsa-miR-6870-3p 0 1 0
chr19:54145727|54146043 hsa-miR-1237-3p 1 0 0
chr19:54145727|54146043 hsa-miR-629-3p 1 0 0
chr19:54145727|54146043 hsa-miR-6793-3p 1 0 0
chr19:54145727|54146043 hsa-miR-6818-5p 0 1 0
chr19:54145727|54146043 hsa-miR-6869-3p 1 0 0
chr19:54145727|54146043 hsa-miR-6886-3p 1 1 0
chr19:54145727|54146043 hsa-miR-5088-3p 0 1 0
chr19:54145727|54146043 hsa-miR-6738-3p 0 1 0
chr19:54145727|54146043 hsa-miR-1292-3p 1 0 0
chr19:54145727|54146043 hsa-miR-7158-5p 1 0 0
chr19:54145727|54146043 hsa-miR-6790-3p 0 1 0
chr19:54145727|54146043 hsa-miR-16-5p 1 1 0
chr19:54145727|54146043 hsa-miR-4802-3p 0 1 0
chr19:54145727|54146043 hsa-miR-5001-5p 1 0 0
chr19:54145727|54146043 hsa-miR-6803-5p 1 0 0
chr19:54145727|54146043 hsa-miR-4685-3p 1 0 0
chr19:54145727|54146043 hsa-miR-3620-5p 1 1 0
chr19:54145727|54146043 hsa-miR-6848-5p 1 0 0
chr19:54145727|54146043 hsa-miR-6791-5p 1 1 0
chr19:54145727|54146043 hsa-miR-6756-3p 1 0 0
chr19:54145727|54146043 hsa-miR-6784-3p 1 0 0
chr19:54145727|54146043 hsa-miR-6862-3p 1 0 0
chr19:54145727|54146043 hsa-miR-10392-3p 1 0 0
chr19:54145727|54146043 hsa-miR-6511b-3p 1 0 0
chr19:54145727|54146043 hsa-miR-6512-3p 0 1 0
chr19:54145727|54146043 hsa-miR-3150b-5p 1 0 0
chr19:54145727|54146043 hsa-miR-4701-5p 1 0 0
chr19:54145727|54146043 hsa-miR-4690-3p 1 1 0
chr19:54145727|54146043 hsa-miR-6797-3p 1 0 0
chr19:54145727|54146043 hsa-miR-4524a-5p 1 0 0
chr19:54145727|54146043 hsa-miR-3150a-5p 1 0 0
chr19:54145727|54146043 hsa-miR-4524b-5p 1 0 0
chr19:54145727|54146043 hsa-miR-498-3p 1 0 0
chr19:54145727|54146043 hsa-miR-4684-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr19:54145727|54146043
ORF Type ORF1
Protein Length 61
Nucleotide Length 186
Protein Sequence MVEDLILHVAVAGGGGGDQRLCCGGRRRACLAGSHSPFWALTSCATISPRASRMSSRSRSS
Nucleotide Sequence CTGGTTGAAGATCTCATCCTCCATGTGGCTGTGGCTGGGGGGGGAGGTGGCGACCAGCGCCTGTGCTGTGGGGGCAGAAGAAGGGCATGCTTAGCTGGCTCACACAGCCCATTCTGGGCCCTCACTTCCTGTGCCACGATCAGCCCCAGGGCCTCACGAATGTCCTCGAGGTCCAGGTCATCGTAG

CircID chr19:54145727|54146043
ORF Type ORF2
Protein Length 50
Nucleotide Length 153
Protein Sequence MAGLGGMGELEVVEVGVLLDWLKISSSMWLWLGGEVATSACAVGAEEGHA
Nucleotide Sequence TTGGCTGGGCTGGGCGGGATGGGAGAGCTGGAGGTGGTTGAGGTGGGCGTGCTGCTGGACTGGTTGAAGATCTCATCCTCCATGTGGCTGTGGCTGGGGGGGGAGGTGGCGACCAGCGCCTGTGCTGTGGGGGCAGAAGAAGGGCATGCTTAG

CircID chr19:54145727|54146043
ORF Type ORF3
Protein Length 51
Nucleotide Length 153
Protein Sequence MAHTAHSGPSLPVPRSAPGPHECPRGPGHRRETRSPRSRGPGMSQHSTQRR
Nucleotide Sequence CTGGCTCACACAGCCCATTCTGGGCCCTCACTTCCTGTGCCACGATCAGCCCCAGGGCCTCACGAATGTCCTCGAGGTCCAGGTCATCGTAGAGAAACTCGTTCTCCTCGAAGTCGGGGTCCTGGGATGAGTCAACATAGTACTCAACGTCGT

CircID chr19:54145727|54146043
ORF Type ORF4
Protein Length 52
Nucleotide Length 159
Protein Sequence MWGQKKGMLSWLTQPILGPHFLCHDQPQGLTNVLEVQVIVEKLVLLEVGVLG
Nucleotide Sequence CTGTGGGGGCAGAAGAAGGGCATGCTTAGCTGGCTCACACAGCCCATTCTGGGCCCTCACTTCCTGTGCCACGATCAGCCCCAGGGCCTCACGAATGTCCTCGAGGTCCAGGTCATCGTAGAGAAACTCGTTCTCCTCGAAGTCGGGGTCCTGGGATGA

CircID chr19:54145727|54146043
ORF Type ORF5
Protein Length 81
Nucleotide Length 243
Protein Sequence MDLEDIREALGLIVAQEVRAQNGLCEPAKHALLLPPQHRRWSPPPPPATATWRMRSSTSPAARPPQPPPALPSRPAQPTVP
Nucleotide Sequence CTGGACCTCGAGGACATTCGTGAGGCCCTGGGGCTGATCGTGGCACAGGAAGTGAGGGCCCAGAATGGGCTGTGTGAGCCAGCTAAGCATGCCCTTCTTCTGCCCCCACAGCACAGGCGCTGGTCGCCACCTCCCCCCCCAGCCACAGCCACATGGAGGATGAGATCTTCAACCAGTCCAGCAGCACGCCCACCTCAACCACCTCCAGCTCTCCCATCCCGCCCAGCCCAGCCAACTGTACCA

CircID chr19:54145727|54146043
ORF Type ORF6
Protein Length 33
Nucleotide Length 102
Protein Sequence MSTMLTHPRTPTSRRTSFSTMTWTSRTFVRPWG
Nucleotide Sequence TTGAGTACTATGTTGACTCATCCCAGGACCCCGACTTCGAGGAGAACGAGTTTCTCTACGATGACCTGGACCTCGAGGACATTCGTGAGGCCCTGGGGCTGA

CircID chr19:54145727|54146043
ORF Type ORF7
Protein Length 32
Nucleotide Length 99
Protein Sequence MGCVSQLSMPFFCPHSTGAGRHLPPQPQPHGG
Nucleotide Sequence ATGGGCTGTGTGAGCCAGCTAAGCATGCCCTTCTTCTGCCCCCACAGCACAGGCGCTGGTCGCCACCTCCCCCCCCAGCCACAGCCACATGGAGGATGA

CircID chr19:54145727|54146043
ORF Type ORF8
Protein Length 42
Nucleotide Length 126
Protein Sequence MVATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTT
Nucleotide Sequence CTGGTCGCCACCTCCCCCCCCAGCCACAGCCACATGGAGGATGAGATCTTCAACCAGTCCAGCAGCACGCCCACCTCAACCACCTCCAGCTCTCCCATCCCGCCCAGCCCAGCCAACTGTACCACG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites