CircNet

General Information

circRNA Basic Information

CircID	chr19:54311457\|54311716
Strand	-
CircType	exon
Host Gene	ENSG00000187116.12;
Algorism	CIRI2;
Sequence	CTGCAGGATATGCCTGCGAGAGCCATAGCATCTGAGCATCCACCTGTGGCTGGGGGTCACAGGGCCCACAGGGAACAGGGCCTGGAACTGCCCACTGGGGGTCAGCTGTGAGTCCAAGGTCCAGGAGAGCTTGTGGTCTCCTTCCTCAGTCAGAATGAACCTGTCGAATCTCAGCCGTGAGCCACACTGGAGGGTCACGTTCTCTCCTGAGGTCACCACAGGACTGGGCAGGGCTGAGAGGGTGGGTTTGTTGTAGAATC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:54311457\|54311716	hsa-miR-185-5p	0	0	1
chr19:54311457\|54311716	hsa-miR-185-3p	0	0	1
chr19:54311457\|54311716	hsa-miR-135b-5p	0	0	1
chr19:54311457\|54311716	hsa-miR-135b-3p	0	0	1
chr19:54311457\|54311716	hsa-miR-345-5p	0	0	1
chr19:54311457\|54311716	hsa-miR-345-3p	0	0	1
chr19:54311457\|54311716	hsa-miR-492	0	0	1
chr19:54311457\|54311716	hsa-miR-495-5p	0	0	1
chr19:54311457\|54311716	hsa-miR-495-3p	0	0	1
chr19:54311457\|54311716	hsa-miR-504-5p	0	0	1
chr19:54311457\|54311716	hsa-miR-504-3p	0	0	1
chr19:54311457\|54311716	hsa-miR-552-5p	0	0	1
chr19:54311457\|54311716	hsa-miR-552-3p	0	0	1
chr19:54311457\|54311716	hsa-miR-1298-5p	0	0	1
chr19:54311457\|54311716	hsa-miR-1298-3p	0	0	1
chr19:54311457\|54311716	hsa-miR-760	0	0	1
chr19:54311457\|54311716	hsa-miR-1291	0	1	1
chr19:54311457\|54311716	hsa-miR-1825	0	0	1
chr19:54311457\|54311716	hsa-miR-296-5p	0	0	1
chr19:54311457\|54311716	hsa-miR-1283	0	0	1
chr19:54311457\|54311716	hsa-miR-146b-3p	0	1	1
chr19:54311457\|54311716	hsa-miR-199a-5p	0	0	1
chr19:54311457\|54311716	hsa-miR-339-5p	0	0	1
chr19:54311457\|54311716	hsa-miR-361-3p	0	1	1
chr19:54311457\|54311716	hsa-miR-199b-5p	0	0	1
chr19:54311457\|54311716	hsa-miR-1274a	0	0	1
chr19:54311457\|54311716	hsa-miR-1274b	0	0	1
chr19:54311457\|54311716	hsa-miR-644	0	0	1
chr19:54311457\|54311716	hsa-miR-1269	0	0	1
chr19:54311457\|54311716	hsa-miR-135a	0	0	1
chr19:54311457\|54311716	hsa-miR-24	0	0	1
chr19:54311457\|54311716	hsa-miR-3164	0	1	0
chr19:54311457\|54311716	hsa-miR-3165	0	1	0
chr19:54311457\|54311716	hsa-miR-4302	0	1	0
chr19:54311457\|54311716	hsa-miR-4322	0	1	0
chr19:54311457\|54311716	hsa-miR-3661	1	0	0
chr19:54311457\|54311716	hsa-miR-3916	0	1	0
chr19:54311457\|54311716	hsa-miR-4533	0	1	0
chr19:54311457\|54311716	hsa-miR-4656	1	0	0
chr19:54311457\|54311716	hsa-miR-6070	0	1	0
chr19:54311457\|54311716	hsa-miR-8057	0	1	0
chr19:54311457\|54311716	hsa-miR-134-3p	1	1	0
chr19:54311457\|54311716	hsa-miR-6822-3p	1	0	0
chr19:54311457\|54311716	hsa-miR-6892-3p	0	1	0
chr19:54311457\|54311716	hsa-miR-3622a-5p	1	0	0
chr19:54311457\|54311716	hsa-miR-6746-5p	0	1	0
chr19:54311457\|54311716	hsa-miR-6787-3p	0	1	0
chr19:54311457\|54311716	hsa-miR-6796-3p	0	1	0
chr19:54311457\|54311716	hsa-miR-939-3p	1	0	0
chr19:54311457\|54311716	hsa-miR-4691-3p	0	1	0
chr19:54311457\|54311716	hsa-miR-1266-3p	0	1	0
chr19:54311457\|54311716	hsa-miR-3690	0	1	0
chr19:54311457\|54311716	hsa-miR-6886-5p	1	0	0
chr19:54311457\|54311716	hsa-miR-4707-5p	0	1	0
chr19:54311457\|54311716	hsa-miR-584-3p	1	1	0
chr19:54311457\|54311716	hsa-miR-1910-5p	0	1	0
chr19:54311457\|54311716	hsa-miR-6865-3p	0	1	0
chr19:54311457\|54311716	hsa-miR-4529-3p	0	1	0
chr19:54311457\|54311716	hsa-miR-6859-3p	0	1	0
chr19:54311457\|54311716	hsa-miR-1207-3p	0	1	0
chr19:54311457\|54311716	hsa-miR-3670	1	0	0
chr19:54311457\|54311716	hsa-miR-3173-5p	0	1	0
chr19:54311457\|54311716	hsa-miR-6779-3p	0	1	0
chr19:54311457\|54311716	hsa-miR-6750-3p	0	1	0
chr19:54311457\|54311716	hsa-miR-4524b-3p	1	1	0
chr19:54311457\|54311716	hsa-miR-6808-3p	0	1	0
chr19:54311457\|54311716	hsa-miR-6893-5p	1	0	0
chr19:54311457\|54311716	hsa-miR-6876-5p	0	1	0
chr19:54311457\|54311716	hsa-miR-6784-3p	0	1	0
chr19:54311457\|54311716	hsa-miR-6775-3p	1	1	0
chr19:54311457\|54311716	hsa-miR-363-5p	0	1	0
chr19:54311457\|54311716	hsa-miR-3136-5p	0	1	0
chr19:54311457\|54311716	hsa-miR-7973	0	1	0
chr19:54311457\|54311716	hsa-miR-3529-3p	0	1	0

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:54311457\|54311716
ORF Type	ORF1
Protein Length	36
Nucleotide Length	111
Protein Sequence	LQDMPARAIASEHPPVAGGHRAHREQGLELPTGGQL
Nucleotide Sequence	CTGCAGGATATGCCTGCGAGAGCCATAGCATCTGAGCATCCACCTGTGGCTGGGGGTCACAGGGCCCACAGGGAACAGGGCCTGGAACTGCCCACTGGGGGTCAGCTGTGA

CircID	chr19:54311457\|54311716
ORF Type	ORF2
Protein Length	74
Nucleotide Length	225
Protein Sequence	MSIHLWLGVTGPTGNRAWNCPLGVSCESKVQESLWSPSSVRMNLSNLSREPHWRVTFSPEVTTGLGRAERVGLL
Nucleotide Sequence	CTGAGCATCCACCTGTGGCTGGGGGTCACAGGGCCCACAGGGAACAGGGCCTGGAACTGCCCACTGGGGGTCAGCTGTGAGTCCAAGGTCCAGGAGAGCTTGTGGTCTCCTTCCTCAGTCAGAATGAACCTGTCGAATCTCAGCCGTGAGCCACACTGGAGGGTCACGTTCTCTCCTGAGGTCACCACAGGACTGGGCAGGGCTGAGAGGGTGGGTTTGTTGTAG

CircID	chr19:54311457\|54311716
ORF Type	ORF3
Protein Length	41
Nucleotide Length	123
Protein Sequence	MDLGLTADPQWAVPGPVPCGPCDPQPQVDAQMLWLSQAYPA
Nucleotide Sequence	CTGGACCTTGGACTCACAGCTGACCCCCAGTGGGCAGTTCCAGGCCCTGTTCCCTGTGGGCCCTGTGACCCCCAGCCACAGGTGGATGCTCAGATGCTATGGCTCTCGCAGGCATATCCTGCA

CircID	chr19:54311457\|54311716
ORF Type	ORF4
Protein Length	77
Nucleotide Length	231
Protein Sequence	MPSPVVTSGENVTLQCGSRLRFDRFILTEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRHILQ
Nucleotide Sequence	CTGCCCAGTCCTGTGGTGACCTCAGGAGAGAACGTGACCCTCCAGTGTGGCTCACGGCTGAGATTCGACAGGTTCATTCTGACTGAGGAAGGAGACCACAAGCTCTCCTGGACCTTGGACTCACAGCTGACCCCCAGTGGGCAGTTCCAGGCCCTGTTCCCTGTGGGCCCTGTGACCCCCAGCCACAGGTGGATGCTCAGATGCTATGGCTCTCGCAGGCATATCCTGCAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information