CircRNA Information

General Information
circRNA Basic Information
CircID chr19:54459763|54459970
Strand +
CircType exon
Host Gene ENSG00000167615.15;
Algorism CIRI2;
Sequence CAAGGCCAATTAGGTATCAATTAACAAGGACACTCGCCCAACCACACACCCCTGTGTAGCACAGAAGCTTGAGAGCCACCATTCATGGGGCCCATCATGGCAGCAGACTAAGCAGCCTCCTGCCTCCCCTTCCTTCTAACTTCCCAAGCTGGTCATGGAGCTCTGTGCACGGCACCCCACATCCTCGTCTGCTCCTGTGACTCCTACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:54459763|54459970 hsa-miR-221-5p 0 0 1
chr19:54459763|54459970 hsa-miR-221-3p 0 0 1
chr19:54459763|54459970 hsa-miR-222-5p 0 0 1
chr19:54459763|54459970 hsa-miR-222-3p 0 0 1
chr19:54459763|54459970 hsa-miR-569 0 0 1
chr19:54459763|54459970 hsa-miR-608 1 0 1
chr19:54459763|54459970 hsa-miR-650 0 0 1
chr19:54459763|54459970 hsa-miR-760 0 0 1
chr19:54459763|54459970 hsa-miR-940 0 0 1
chr19:54459763|54459970 hsa-miR-1265 1 0 1
chr19:54459763|54459970 hsa-miR-1252-5p 0 0 1
chr19:54459763|54459970 hsa-miR-1252-3p 0 0 1
chr19:54459763|54459970 hsa-miR-513c-5p 0 0 1
chr19:54459763|54459970 hsa-miR-513c-3p 0 0 1
chr19:54459763|54459970 hsa-miR-1827 0 0 1
chr19:54459763|54459970 hsa-miR-296-5p 0 0 1
chr19:54459763|54459970 hsa-miR-491-5p 0 0 1
chr19:54459763|54459970 hsa-miR-485-5p 1 0 1
chr19:54459763|54459970 hsa-miR-299-3p 0 0 1
chr19:54459763|54459970 hsa-miR-513a-5p 0 0 1
chr19:54459763|54459970 hsa-miR-342-5p 0 0 1
chr19:54459763|54459970 hsa-miR-220c 0 0 1
chr19:54459763|54459970 hsa-miR-644 0 0 1
chr19:54459763|54459970 hsa-miR-147 0 0 1
chr19:54459763|54459970 hsa-miR-298 1 0 0
chr19:54459763|54459970 hsa-miR-665 1 0 0
chr19:54459763|54459970 hsa-miR-1202 1 0 0
chr19:54459763|54459970 hsa-miR-1286 1 0 0
chr19:54459763|54459970 hsa-miR-1294 1 0 0
chr19:54459763|54459970 hsa-miR-1275 1 0 0
chr19:54459763|54459970 hsa-miR-3141 1 0 0
chr19:54459763|54459970 hsa-miR-3154 1 0 0
chr19:54459763|54459970 hsa-miR-3196 1 0 0
chr19:54459763|54459970 hsa-miR-4449 1 0 0
chr19:54459763|54459970 hsa-miR-2392 1 0 0
chr19:54459763|54459970 hsa-miR-4533 1 0 0
chr19:54459763|54459970 hsa-miR-4538 1 0 0
chr19:54459763|54459970 hsa-miR-4651 1 0 0
chr19:54459763|54459970 hsa-miR-4663 1 0 0
chr19:54459763|54459970 hsa-miR-4675 1 0 0
chr19:54459763|54459970 hsa-miR-4688 1 0 0
chr19:54459763|54459970 hsa-miR-4706 1 0 0
chr19:54459763|54459970 hsa-miR-4739 1 0 0
chr19:54459763|54459970 hsa-miR-5090 1 0 0
chr19:54459763|54459970 hsa-miR-5572 1 0 0
chr19:54459763|54459970 hsa-miR-5698 1 0 0
chr19:54459763|54459970 hsa-miR-5787 1 0 0
chr19:54459763|54459970 hsa-miR-6081 1 0 0
chr19:54459763|54459970 hsa-miR-6127 1 0 0
chr19:54459763|54459970 hsa-miR-6133 1 0 0
chr19:54459763|54459970 hsa-miR-12122 1 0 0
chr19:54459763|54459970 hsa-miR-211-3p 1 0 0
chr19:54459763|54459970 hsa-miR-4433b-3p 1 0 0
chr19:54459763|54459970 hsa-miR-92a-1-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6734-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6747-5p 1 0 0
chr19:54459763|54459970 hsa-miR-4433a-3p 1 0 0
chr19:54459763|54459970 hsa-miR-6765-5p 1 0 0
chr19:54459763|54459970 hsa-miR-7106-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6825-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6894-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6799-5p 1 0 0
chr19:54459763|54459970 hsa-miR-1236-5p 1 0 0
chr19:54459763|54459970 hsa-miR-3622a-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6089 1 0 0
chr19:54459763|54459970 hsa-miR-3192-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6757-5p 1 0 0
chr19:54459763|54459970 hsa-miR-4695-5p 1 0 0
chr19:54459763|54459970 hsa-miR-4653-3p 1 0 0
chr19:54459763|54459970 hsa-miR-4722-5p 1 0 0
chr19:54459763|54459970 hsa-miR-3622b-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6759-5p 1 0 0
chr19:54459763|54459970 hsa-miR-433-3p 1 0 0
chr19:54459763|54459970 hsa-miR-6742-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6716-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6871-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6768-5p 1 0 0
chr19:54459763|54459970 hsa-miR-1292-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6772-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6796-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6732-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6805-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6827-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6798-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6782-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6821-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6740-5p 1 0 0
chr19:54459763|54459970 hsa-let-7d-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6771-5p 1 0 0
chr19:54459763|54459970 hsa-miR-4690-5p 1 0 0
chr19:54459763|54459970 hsa-let-7b-5p 1 0 0
chr19:54459763|54459970 hsa-miR-4787-5p 1 0 0
chr19:54459763|54459970 hsa-miR-149-3p 1 0 0
chr19:54459763|54459970 hsa-miR-6717-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6830-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6824-5p 1 0 0
chr19:54459763|54459970 hsa-miR-3162-5p 1 0 0
chr19:54459763|54459970 hsa-miR-574-5p 1 0 0
chr19:54459763|54459970 hsa-let-7c-5p 1 0 0
chr19:54459763|54459970 hsa-let-7e-5p 1 0 0
chr19:54459763|54459970 hsa-let-7a-5p 1 0 0
chr19:54459763|54459970 hsa-miR-10400-5p 1 0 0
chr19:54459763|54459970 hsa-miR-1207-5p 1 0 0
chr19:54459763|54459970 hsa-miR-1233-5p 1 0 0
chr19:54459763|54459970 hsa-miR-1273h-5p 1 0 0
chr19:54459763|54459970 hsa-miR-4763-3p 1 0 0
chr19:54459763|54459970 hsa-miR-6769b-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6778-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6787-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6812-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6816-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6870-5p 1 0 0
chr19:54459763|54459970 hsa-miR-1343-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6743-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6752-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6754-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6756-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6813-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6851-5p 1 0 0
chr19:54459763|54459970 hsa-miR-7107-5p 1 0 0
chr19:54459763|54459970 hsa-miR-7110-5p 1 0 0
chr19:54459763|54459970 hsa-miR-10401-5p 1 0 0
chr19:54459763|54459970 hsa-miR-11181-3p 1 0 0
chr19:54459763|54459970 hsa-miR-1249-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6722-3p 1 0 0
chr19:54459763|54459970 hsa-miR-6763-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6774-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6779-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6780a-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6808-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6879-5p 1 0 0
chr19:54459763|54459970 hsa-miR-7111-5p 1 0 0
chr19:54459763|54459970 hsa-miR-4728-5p 1 0 0
chr19:54459763|54459970 hsa-miR-5196-5p 1 0 0
chr19:54459763|54459970 hsa-miR-328-5p 1 0 0
chr19:54459763|54459970 hsa-miR-4649-5p 1 0 0
chr19:54459763|54459970 hsa-miR-4745-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6729-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6777-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6795-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6848-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6858-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6883-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6889-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6885-5p 1 0 0
chr19:54459763|54459970 hsa-miR-939-5p 1 0 0
chr19:54459763|54459970 hsa-miR-3173-3p 1 0 0
chr19:54459763|54459970 hsa-miR-4646-5p 1 0 0
chr19:54459763|54459970 hsa-miR-4747-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6891-5p 1 0 0
chr19:54459763|54459970 hsa-miR-6785-5p 1 0 0
chr19:54459763|54459970 hsa-miR-4667-5p 1 0 0
chr19:54459763|54459970 hsa-miR-10400-3p 1 0 0
chr19:54459763|54459970 hsa-miR-6837-5p 1 0 0
chr19:54459763|54459970 hsa-miR-4756-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr19:54459763|54459970
ORF Type ORF1
Protein Length 43
Nucleotide Length 132
Protein Sequence MRATIHGAHHGSRLSSLLPPLPSNFPSWSWSSVHGTPHPRLLL
Nucleotide Sequence TTGAGAGCCACCATTCATGGGGCCCATCATGGCAGCAGACTAAGCAGCCTCCTGCCTCCCCTTCCTTCTAACTTCCCAAGCTGGTCATGGAGCTCTGTGCACGGCACCCCACATCCTCGTCTGCTCCTGTGA
CircID chr19:54459763|54459970
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MMGPMNGGSQASVLHRGVWLGECPC
Nucleotide Sequence ATGATGGGCCCCATGAATGGTGGCTCTCAAGCTTCTGTGCTACACAGGGGTGTGTGGTTGGGCGAGTGTCCTTGTTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab