CircNet

General Information

circRNA Basic Information

CircID	chr19:55230619\|55230878
Strand	+
CircType	exon
Host Gene	ENSG00000105063.17;
Algorism	CIRI2;
Sequence	CAGAGACCCCTCTACCTCTGTCCCAGCCTCCGGGGCCCACCAGCCCCCCCAGACCACAGAAGGGGAGAAGAGCCCAGAGCCCTTGGGGCTTCCCCAAAGCCAGAGGTGAGCACCAGGGCAGCAGGGCGGGGGGGTGGGGGTGGGGCTGGTGGGGCAGGAAGTGACCTCTGCACATCCCCTCTCTCCCCTGACAGTGCCCAGGCCCTCACGCCTCCTCCGATACCCAATGGCTCTGCCCCGGAAGGGCCTGCATCCCCAGG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:55230619\|55230878	hsa-let-7b-5p	0	0	1
chr19:55230619\|55230878	hsa-let-7b-3p	0	0	1
chr19:55230619\|55230878	hsa-let-7c-5p	0	0	1
chr19:55230619\|55230878	hsa-let-7c-3p	0	0	1
chr19:55230619\|55230878	hsa-let-7d-5p	0	0	1
chr19:55230619\|55230878	hsa-let-7d-3p	0	0	1
chr19:55230619\|55230878	hsa-let-7e-5p	0	0	1
chr19:55230619\|55230878	hsa-let-7e-3p	0	0	1
chr19:55230619\|55230878	hsa-miR-98-5p	0	0	1
chr19:55230619\|55230878	hsa-miR-98-3p	0	0	1
chr19:55230619\|55230878	hsa-let-7g-5p	0	0	1
chr19:55230619\|55230878	hsa-let-7g-3p	0	0	1
chr19:55230619\|55230878	hsa-let-7i-5p	0	0	1
chr19:55230619\|55230878	hsa-let-7i-3p	0	0	1
chr19:55230619\|55230878	hsa-miR-149-5p	0	0	1
chr19:55230619\|55230878	hsa-miR-149-3p	0	0	1
chr19:55230619\|55230878	hsa-miR-185-5p	0	0	1
chr19:55230619\|55230878	hsa-miR-185-3p	0	0	1
chr19:55230619\|55230878	hsa-miR-370-5p	0	0	1
chr19:55230619\|55230878	hsa-miR-370-3p	0	0	1
chr19:55230619\|55230878	hsa-miR-326	1	1	1
chr19:55230619\|55230878	hsa-miR-593-5p	0	0	1
chr19:55230619\|55230878	hsa-miR-593-3p	0	0	1
chr19:55230619\|55230878	hsa-miR-612	1	0	1
chr19:55230619\|55230878	hsa-miR-637	1	1	1
chr19:55230619\|55230878	hsa-miR-661	0	1	1
chr19:55230619\|55230878	hsa-miR-765	0	0	1
chr19:55230619\|55230878	hsa-miR-874-5p	0	0	1
chr19:55230619\|55230878	hsa-miR-874-3p	0	0	1
chr19:55230619\|55230878	hsa-miR-541-5p	0	0	1
chr19:55230619\|55230878	hsa-miR-541-3p	0	0	1
chr19:55230619\|55230878	hsa-miR-760	1	1	1
chr19:55230619\|55230878	hsa-miR-942-5p	0	0	1
chr19:55230619\|55230878	hsa-miR-942-3p	0	0	1
chr19:55230619\|55230878	hsa-miR-1178-5p	0	0	1
chr19:55230619\|55230878	hsa-miR-1178-3p	0	0	1
chr19:55230619\|55230878	hsa-miR-1226-5p	0	0	1
chr19:55230619\|55230878	hsa-miR-1226-3p	0	0	1
chr19:55230619\|55230878	hsa-miR-1237-5p	0	0	1
chr19:55230619\|55230878	hsa-miR-1237-3p	0	0	1
chr19:55230619\|55230878	hsa-miR-671-5p	0	1	1
chr19:55230619\|55230878	hsa-miR-296-5p	0	0	1
chr19:55230619\|55230878	hsa-miR-486-3p	0	0	1
chr19:55230619\|55230878	hsa-miR-485-5p	0	0	1
chr19:55230619\|55230878	hsa-miR-146b-3p	0	0	1
chr19:55230619\|55230878	hsa-miR-1225-5p	1	0	1
chr19:55230619\|55230878	hsa-miR-654-5p	0	1	1
chr19:55230619\|55230878	hsa-miR-324-3p	0	0	1
chr19:55230619\|55230878	hsa-miR-330-5p	0	1	1
chr19:55230619\|55230878	hsa-miR-1302	0	0	1
chr19:55230619\|55230878	hsa-miR-138	0	0	1
chr19:55230619\|55230878	hsa-let-7a	0	0	1
chr19:55230619\|55230878	hsa-let-7f	0	0	1
chr19:55230619\|55230878	hsa-miR-1285	0	0	1
chr19:55230619\|55230878	hsa-miR-608	1	0	0
chr19:55230619\|55230878	hsa-miR-623	1	0	0
chr19:55230619\|55230878	hsa-miR-762	1	1	0
chr19:55230619\|55230878	hsa-miR-940	1	0	0
chr19:55230619\|55230878	hsa-miR-1913	0	1	0
chr19:55230619\|55230878	hsa-miR-2278	1	0	0
chr19:55230619\|55230878	hsa-miR-3122	1	0	0
chr19:55230619\|55230878	hsa-miR-3132	1	0	0
chr19:55230619\|55230878	hsa-miR-3137	1	0	0
chr19:55230619\|55230878	hsa-miR-3147	1	0	0
chr19:55230619\|55230878	hsa-miR-3175	0	1	0
chr19:55230619\|55230878	hsa-miR-3196	1	0	0
chr19:55230619\|55230878	hsa-miR-4298	1	1	0
chr19:55230619\|55230878	hsa-miR-4323	0	1	0
chr19:55230619\|55230878	hsa-miR-4257	0	1	0
chr19:55230619\|55230878	hsa-miR-3652	1	0	0
chr19:55230619\|55230878	hsa-miR-3907	0	1	0
chr19:55230619\|55230878	hsa-miR-3945	1	0	0
chr19:55230619\|55230878	hsa-miR-4451	1	0	0
chr19:55230619\|55230878	hsa-miR-4488	1	0	0
chr19:55230619\|55230878	hsa-miR-4498	1	0	0
chr19:55230619\|55230878	hsa-miR-4505	1	0	0
chr19:55230619\|55230878	hsa-miR-4507	1	0	0
chr19:55230619\|55230878	hsa-miR-4512	0	1	0
chr19:55230619\|55230878	hsa-miR-4525	1	0	0
chr19:55230619\|55230878	hsa-miR-1587	1	0	0
chr19:55230619\|55230878	hsa-miR-4644	0	1	0
chr19:55230619\|55230878	hsa-miR-4651	1	0	0
chr19:55230619\|55230878	hsa-miR-4656	1	0	0
chr19:55230619\|55230878	hsa-miR-4674	0	1	0
chr19:55230619\|55230878	hsa-miR-4688	1	0	0
chr19:55230619\|55230878	hsa-miR-4739	1	1	0
chr19:55230619\|55230878	hsa-miR-4741	1	0	0
chr19:55230619\|55230878	hsa-miR-5090	1	1	0
chr19:55230619\|55230878	hsa-miR-5787	1	1	0
chr19:55230619\|55230878	hsa-miR-6086	1	0	0
chr19:55230619\|55230878	hsa-miR-6090	1	0	0
chr19:55230619\|55230878	hsa-miR-6127	1	0	0
chr19:55230619\|55230878	hsa-miR-6132	1	0	0
chr19:55230619\|55230878	hsa-miR-6860	1	1	0
chr19:55230619\|55230878	hsa-miR-7150	1	0	0
chr19:55230619\|55230878	hsa-miR-8085	1	1	0
chr19:55230619\|55230878	hsa-miR-8089	1	1	0
chr19:55230619\|55230878	hsa-miR-127-5p	0	1	0
chr19:55230619\|55230878	hsa-miR-211-3p	1	0	0
chr19:55230619\|55230878	hsa-miR-18a-3p	1	1	0
chr19:55230619\|55230878	hsa-miR-6734-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-3194-3p	1	0	0
chr19:55230619\|55230878	hsa-miR-6747-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-125b-1-3p	1	0	0
chr19:55230619\|55230878	hsa-miR-6825-5p	1	1	0
chr19:55230619\|55230878	hsa-miR-6857-5p	0	1	0
chr19:55230619\|55230878	hsa-miR-25-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6089	1	0	0
chr19:55230619\|55230878	hsa-miR-4695-5p	0	1	0
chr19:55230619\|55230878	hsa-miR-6820-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6875-3p	1	0	0
chr19:55230619\|55230878	hsa-miR-6727-5p	1	1	0
chr19:55230619\|55230878	hsa-miR-6721-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-197-5p	1	1	0
chr19:55230619\|55230878	hsa-miR-3189-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6849-3p	0	1	0
chr19:55230619\|55230878	hsa-miR-7845-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-1915-5p	0	1	0
chr19:55230619\|55230878	hsa-miR-3180-3p	1	0	0
chr19:55230619\|55230878	hsa-miR-6772-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6793-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6868-3p	0	1	0
chr19:55230619\|55230878	hsa-miR-6732-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6827-5p	1	1	0
chr19:55230619\|55230878	hsa-miR-6760-5p	0	1	0
chr19:55230619\|55230878	hsa-miR-2467-3p	1	1	0
chr19:55230619\|55230878	hsa-miR-5008-5p	0	1	0
chr19:55230619\|55230878	hsa-miR-6786-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-939-3p	0	1	0
chr19:55230619\|55230878	hsa-miR-5088-5p	0	1	0
chr19:55230619\|55230878	hsa-miR-7109-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6740-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-4763-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6763-3p	1	0	0
chr19:55230619\|55230878	hsa-miR-7108-3p	0	1	0
chr19:55230619\|55230878	hsa-miR-1229-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6784-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-4764-5p	0	1	0
chr19:55230619\|55230878	hsa-miR-1908-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-4732-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6749-5p	1	1	0
chr19:55230619\|55230878	hsa-miR-4787-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6736-3p	0	1	0
chr19:55230619\|55230878	hsa-miR-6824-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6781-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-5010-5p	1	1	0
chr19:55230619\|55230878	hsa-miR-7846-3p	1	0	0
chr19:55230619\|55230878	hsa-miR-616-3p	1	0	0
chr19:55230619\|55230878	hsa-miR-4758-3p	0	1	0
chr19:55230619\|55230878	hsa-miR-1224-3p	0	1	0
chr19:55230619\|55230878	hsa-miR-6752-3p	0	1	0
chr19:55230619\|55230878	hsa-miR-3074-5p	0	1	0
chr19:55230619\|55230878	hsa-miR-6501-3p	1	0	0
chr19:55230619\|55230878	hsa-miR-4433a-5p	1	1	0
chr19:55230619\|55230878	hsa-miR-3173-5p	0	1	0
chr19:55230619\|55230878	hsa-miR-6798-3p	0	1	0
chr19:55230619\|55230878	hsa-miR-4433b-5p	1	1	0
chr19:55230619\|55230878	hsa-miR-6729-3p	0	1	0
chr19:55230619\|55230878	hsa-miR-3162-3p	0	1	0
chr19:55230619\|55230878	hsa-miR-1207-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-1233-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-4763-3p	1	0	0
chr19:55230619\|55230878	hsa-miR-6816-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6870-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6775-5p	1	1	0
chr19:55230619\|55230878	hsa-miR-3180	1	0	0
chr19:55230619\|55230878	hsa-miR-5001-5p	1	1	0
chr19:55230619\|55230878	hsa-miR-6737-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6743-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6752-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6756-5p	0	1	0
chr19:55230619\|55230878	hsa-miR-6769a-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6803-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6813-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6819-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6842-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6851-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-7107-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-7110-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-10401-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-11181-3p	0	1	0
chr19:55230619\|55230878	hsa-miR-1249-5p	1	1	0
chr19:55230619\|55230878	hsa-miR-6751-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6774-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6797-5p	1	1	0
chr19:55230619\|55230878	hsa-miR-6808-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-3127-3p	1	1	0
chr19:55230619\|55230878	hsa-miR-3620-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-4728-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-5189-5p	1	1	0
chr19:55230619\|55230878	hsa-miR-5196-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6780b-5p	0	1	0
chr19:55230619\|55230878	hsa-miR-6836-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-328-5p	1	1	0
chr19:55230619\|55230878	hsa-miR-4725-3p	0	1	0
chr19:55230619\|55230878	hsa-miR-4726-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-4745-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6735-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-675-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6795-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6846-5p	1	1	0
chr19:55230619\|55230878	hsa-miR-6848-5p	1	1	0
chr19:55230619\|55230878	hsa-miR-6887-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-4723-5p	1	1	0
chr19:55230619\|55230878	hsa-miR-6831-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-939-5p	1	1	0
chr19:55230619\|55230878	hsa-miR-6511b-5p	0	1	0
chr19:55230619\|55230878	hsa-miR-3085-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-10396a-3p	0	1	0
chr19:55230619\|55230878	hsa-miR-10396b-3p	0	1	0
chr19:55230619\|55230878	hsa-miR-3940-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6731-5p	1	1	0
chr19:55230619\|55230878	hsa-miR-6758-5p	1	1	0
chr19:55230619\|55230878	hsa-miR-6856-5p	0	1	0
chr19:55230619\|55230878	hsa-miR-6799-3p	1	1	0
chr19:55230619\|55230878	hsa-miR-6773-5p	0	1	0
chr19:55230619\|55230878	hsa-miR-7843-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-1914-3p	1	0	0
chr19:55230619\|55230878	hsa-miR-4700-5p	0	1	0
chr19:55230619\|55230878	hsa-miR-10398-3p	0	1	0
chr19:55230619\|55230878	hsa-miR-4646-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-4747-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6785-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-4667-5p	0	1	0
chr19:55230619\|55230878	hsa-miR-3184-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6724-5p	1	1	0
chr19:55230619\|55230878	hsa-miR-6791-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6893-3p	1	1	0
chr19:55230619\|55230878	hsa-miR-6756-3p	1	0	0
chr19:55230619\|55230878	hsa-miR-6784-3p	0	1	0
chr19:55230619\|55230878	hsa-miR-6862-3p	1	1	0
chr19:55230619\|55230878	hsa-miR-6810-3p	1	1	0
chr19:55230619\|55230878	hsa-miR-6837-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-10392-3p	1	1	0
chr19:55230619\|55230878	hsa-miR-4756-5p	1	0	0
chr19:55230619\|55230878	hsa-miR-6884-5p	0	1	0
chr19:55230619\|55230878	hsa-miR-6811-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:55230619\|55230878
ORF Type	ORF1
Protein Length	38
Nucleotide Length	114
Protein Sequence	MVGQEVTSAHPLSPLTVPRPSRLLRYPMALPRKGLHPQ
Nucleotide Sequence	CTGGTGGGGCAGGAAGTGACCTCTGCACATCCCCTCTCTCCCCTGACAGTGCCCAGGCCCTCACGCCTCCTCCGATACCCAATGGCTCTGCCCCGGAAGGGCCTGCATCCCCAG

CircID	chr19:55230619\|55230878
ORF Type	ORF2
Protein Length	48
Nucleotide Length	147
Protein Sequence	MSQPPGPTSPPRPQKGRRAQSPWGFPKARGEHQGSRAGGWGWGWWGRK
Nucleotide Sequence	CTGTCCCAGCCTCCGGGGCCCACCAGCCCCCCCAGACCACAGAAGGGGAGAAGAGCCCAGAGCCCTTGGGGCTTCCCCAAAGCCAGAGGTGAGCACCAGGGCAGCAGGGCGGGGGGGTGGGGGTGGGGCTGGTGGGGCAGGAAGTGA

CircID	chr19:55230619\|55230878
ORF Type	ORF3
Protein Length	71
Nucleotide Length	216
Protein Sequence	MGIGGGVRAWALSGERGDVQRSLPAPPAPPPPPRPAALVLTSGFGEAPRALGSSPLLWSGGAGGPRRLGQR
Nucleotide Sequence	TTGGGTATCGGAGGAGGCGTGAGGGCCTGGGCACTGTCAGGGGAGAGAGGGGATGTGCAGAGGTCACTTCCTGCCCCACCAGCCCCACCCCCACCCCCCCGCCCTGCTGCCCTGGTGCTCACCTCTGGCTTTGGGGAAGCCCCAAGGGCTCTGGGCTCTTCTCCCCTTCTGTGGTCTGGGGGGGCTGGTGGGCCCCGGAGGCTGGGACAGAGGTAG

CircID	chr19:55230619\|55230878
ORF Type	ORF4
Protein Length	58
Nucleotide Length	174
Protein Sequence	MCRGHFLPHQPHPHPPALLPWCSPLALGKPQGLWALLPFCGLGGLVGPGGWDRGRGVS
Nucleotide Sequence	ATGTGCAGAGGTCACTTCCTGCCCCACCAGCCCCACCCCCACCCCCCCGCCCTGCTGCCCTGGTGCTCACCTCTGGCTTTGGGGAAGCCCCAAGGGCTCTGGGCTCTTCTCCCCTTCTGTGGTCTGGGGGGGCTGGTGGGCCCCGGAGGCTGGGACAGAGGTAGAGGGGTCTCT

CircID	chr19:55230619\|55230878
ORF Type	ORF5
Protein Length	67
Nucleotide Length	201
Protein Sequence	MGTVRGERGCAEVTSCPTSPTPTPPPCCPGAHLWLWGSPKGSGLFSPSVVWGGWWAPEAGTEVEGSL
Nucleotide Sequence	CTGGGCACTGTCAGGGGAGAGAGGGGATGTGCAGAGGTCACTTCCTGCCCCACCAGCCCCACCCCCACCCCCCCGCCCTGCTGCCCTGGTGCTCACCTCTGGCTTTGGGGAAGCCCCAAGGGCTCTGGGCTCTTCTCCCCTTCTGTGGTCTGGGGGGGCTGGTGGGCCCCGGAGGCTGGGACAGAGGTAGAGGGGTCTCTG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information