CircRNA Information

General Information
circRNA Basic Information
CircID chr19:55231598|55231967
Strand -
CircType exon
Host Gene ENSG00000105063.17;
Algorism CIRI2;
Sequence CTGAGGGCTCCGTGACTTTGCTGCCTTCTGTGGCTTCCTGAGGTGCTGAGGGGGGTGTGGGGTCCTGAGACCTGGTAGGCGAGAGAGGCAGCCCAAGGGGGCAGCTAGGGTTAGCACTCGAGCCTATGAGAGGACGGGGACCCCATGGCCACCTCCTGGCCTCGGGATACCAGCACCATTTAGCCCGTTCCATCCGGTTCTCACCTGAGCTGCAGGGCGTCACGGGCAGGAGGGCTGGCCAGGCTCTGAGTGGGGAGGCCCTGGGGCACACTGAGGGGCCCCTGTGGGGCTGGAGGCCCAGTGTGCAGCTCTTCCTCCCCGGAGACTCGGGGGCTGGTCGGGGCATCTGTAGGCACTGGGTCAAAGGTGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:55231598|55231967 hsa-miR-22-5p 0 0 1
chr19:55231598|55231967 hsa-miR-22-3p 0 0 1
chr19:55231598|55231967 hsa-miR-224-5p 0 0 1
chr19:55231598|55231967 hsa-miR-224-3p 0 0 1
chr19:55231598|55231967 hsa-miR-146a-5p 0 0 1
chr19:55231598|55231967 hsa-miR-146a-3p 0 0 1
chr19:55231598|55231967 hsa-miR-519e-5p 0 0 1
chr19:55231598|55231967 hsa-miR-519e-3p 0 0 1
chr19:55231598|55231967 hsa-miR-522-5p 0 0 1
chr19:55231598|55231967 hsa-miR-522-3p 0 0 1
chr19:55231598|55231967 hsa-miR-545-5p 0 0 1
chr19:55231598|55231967 hsa-miR-545-3p 0 0 1
chr19:55231598|55231967 hsa-miR-558 0 0 1
chr19:55231598|55231967 hsa-miR-589-5p 0 0 1
chr19:55231598|55231967 hsa-miR-589-3p 0 0 1
chr19:55231598|55231967 hsa-miR-635 0 0 1
chr19:55231598|55231967 hsa-miR-648 0 0 1
chr19:55231598|55231967 hsa-miR-1301-5p 0 0 1
chr19:55231598|55231967 hsa-miR-1301-3p 0 0 1
chr19:55231598|55231967 hsa-miR-766-5p 0 0 1
chr19:55231598|55231967 hsa-miR-766-3p 0 0 1
chr19:55231598|55231967 hsa-miR-665 0 0 1
chr19:55231598|55231967 hsa-miR-873-5p 0 0 1
chr19:55231598|55231967 hsa-miR-873-3p 0 0 1
chr19:55231598|55231967 hsa-miR-1247-5p 0 0 1
chr19:55231598|55231967 hsa-miR-1247-3p 0 0 1
chr19:55231598|55231967 hsa-miR-1266-5p 0 0 1
chr19:55231598|55231967 hsa-miR-1266-3p 0 0 1
chr19:55231598|55231967 hsa-miR-1825 0 0 1
chr19:55231598|55231967 hsa-miR-671-5p 0 1 1
chr19:55231598|55231967 hsa-miR-125a-3p 0 1 1
chr19:55231598|55231967 hsa-miR-296-5p 0 0 1
chr19:55231598|55231967 hsa-miR-615-5p 1 1 1
chr19:55231598|55231967 hsa-miR-1184 0 0 1
chr19:55231598|55231967 hsa-miR-324-3p 0 0 1
chr19:55231598|55231967 hsa-miR-515-3p 0 0 1
chr19:55231598|55231967 hsa-miR-146b-5p 0 0 1
chr19:55231598|55231967 hsa-miR-1233 0 0 1
chr19:55231598|55231967 hsa-miR-220c 0 0 1
chr19:55231598|55231967 hsa-miR-138 0 0 1
chr19:55231598|55231967 hsa-miR-618 0 1 0
chr19:55231598|55231967 hsa-miR-663b 1 0 0
chr19:55231598|55231967 hsa-miR-1913 1 1 0
chr19:55231598|55231967 hsa-miR-1976 0 1 0
chr19:55231598|55231967 hsa-miR-3183 0 1 0
chr19:55231598|55231967 hsa-miR-4302 0 1 0
chr19:55231598|55231967 hsa-miR-4323 0 1 0
chr19:55231598|55231967 hsa-miR-4270 0 1 0
chr19:55231598|55231967 hsa-miR-3714 0 1 0
chr19:55231598|55231967 hsa-miR-3909 0 1 0
chr19:55231598|55231967 hsa-miR-3916 0 1 0
chr19:55231598|55231967 hsa-miR-3943 0 1 0
chr19:55231598|55231967 hsa-miR-4512 0 1 0
chr19:55231598|55231967 hsa-miR-3972 1 0 0
chr19:55231598|55231967 hsa-miR-4647 1 0 0
chr19:55231598|55231967 hsa-miR-4656 1 0 0
chr19:55231598|55231967 hsa-miR-4660 1 1 0
chr19:55231598|55231967 hsa-miR-4706 1 1 0
chr19:55231598|55231967 hsa-miR-4739 1 1 0
chr19:55231598|55231967 hsa-miR-5047 0 1 0
chr19:55231598|55231967 hsa-miR-6077 1 1 0
chr19:55231598|55231967 hsa-miR-8064 0 1 0
chr19:55231598|55231967 hsa-miR-12122 0 1 0
chr19:55231598|55231967 hsa-miR-7106-5p 0 1 0
chr19:55231598|55231967 hsa-miR-6720-5p 0 1 0
chr19:55231598|55231967 hsa-miR-6854-5p 1 1 0
chr19:55231598|55231967 hsa-miR-6089 1 1 0
chr19:55231598|55231967 hsa-miR-6762-3p 0 1 0
chr19:55231598|55231967 hsa-miR-3187-3p 0 1 0
chr19:55231598|55231967 hsa-miR-770-5p 1 0 0
chr19:55231598|55231967 hsa-miR-7110-3p 0 1 0
chr19:55231598|55231967 hsa-miR-6845-3p 0 1 0
chr19:55231598|55231967 hsa-miR-2467-5p 0 1 0
chr19:55231598|55231967 hsa-miR-3194-5p 0 1 0
chr19:55231598|55231967 hsa-miR-6882-3p 1 1 0
chr19:55231598|55231967 hsa-miR-3934-3p 0 1 0
chr19:55231598|55231967 hsa-miR-939-3p 0 1 0
chr19:55231598|55231967 hsa-miR-4763-5p 1 1 0
chr19:55231598|55231967 hsa-miR-6763-3p 1 0 0
chr19:55231598|55231967 hsa-miR-6757-3p 0 1 0
chr19:55231598|55231967 hsa-miR-887-3p 1 0 0
chr19:55231598|55231967 hsa-miR-92b-5p 1 0 0
chr19:55231598|55231967 hsa-miR-339-5p 0 1 0
chr19:55231598|55231967 hsa-miR-3190-5p 0 1 0
chr19:55231598|55231967 hsa-miR-664b-5p 0 1 0
chr19:55231598|55231967 hsa-miR-4687-5p 0 1 0
chr19:55231598|55231967 hsa-miR-3158-3p 0 1 0
chr19:55231598|55231967 hsa-miR-671-3p 1 0 0
chr19:55231598|55231967 hsa-miR-4749-3p 0 1 0
chr19:55231598|55231967 hsa-miR-3664-3p 0 1 0
chr19:55231598|55231967 hsa-miR-6729-3p 1 1 0
chr19:55231598|55231967 hsa-miR-1251-5p 0 1 0
chr19:55231598|55231967 hsa-miR-6851-5p 1 1 0
chr19:55231598|55231967 hsa-miR-6797-5p 1 1 0
chr19:55231598|55231967 hsa-miR-10396a-3p 1 1 0
chr19:55231598|55231967 hsa-miR-10396b-3p 1 1 0
chr19:55231598|55231967 hsa-miR-10392-3p 1 1 0
chr19:55231598|55231967 hsa-miR-3130-5p 0 1 0
chr19:55231598|55231967 hsa-miR-4723-3p 0 1 0
chr19:55231598|55231967 hsa-miR-6512-3p 0 1 0
chr19:55231598|55231967 hsa-miR-6769b-3p 0 1 0
chr19:55231598|55231967 hsa-miR-6744-3p 0 1 0
chr19:55231598|55231967 hsa-miR-6764-5p 0 1 0
chr19:55231598|55231967 hsa-miR-4482-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr19:55231598|55231967
ORF Type ORF1
Protein Length 33
Nucleotide Length 99
Protein Sequence MRGPCGAGGPVCSSSSPETRGLVGASVGTGSKV
Nucleotide Sequence CTGAGGGGCCCCTGTGGGGCTGGAGGCCCAGTGTGCAGCTCTTCCTCCCCGGAGACTCGGGGGCTGGTCGGGGCATCTGTAGGCACTGGGTCAAAGGTG

CircID chr19:55231598|55231967
ORF Type ORF2
Protein Length 47
Nucleotide Length 144
Protein Sequence MRPGRRERQPKGAARVSTRAYERTGTPWPPPGLGIPAPFSPFHPVLT
Nucleotide Sequence CTGAGACCTGGTAGGCGAGAGAGGCAGCCCAAGGGGGCAGCTAGGGTTAGCACTCGAGCCTATGAGAGGACGGGGACCCCATGGCCACCTCCTGGCCTCGGGATACCAGCACCATTTAGCCCGTTCCATCCGGTTCTCACCTGA

CircID chr19:55231598|55231967
ORF Type ORF3
Protein Length 99
Nucleotide Length 297
Protein Sequence MVGERGSPRGQLGLALEPMRGRGPHGHLLASGYQHHLARSIRFSPELQGVTGRRAGQALSGEALGHTEGPLWGWRPSVQLFLPGDSGAGRGICRHWVKG
Nucleotide Sequence CTGGTAGGCGAGAGAGGCAGCCCAAGGGGGCAGCTAGGGTTAGCACTCGAGCCTATGAGAGGACGGGGACCCCATGGCCACCTCCTGGCCTCGGGATACCAGCACCATTTAGCCCGTTCCATCCGGTTCTCACCTGAGCTGCAGGGCGTCACGGGCAGGAGGGCTGGCCAGGCTCTGAGTGGGGAGGCCCTGGGGCACACTGAGGGGCCCCTGTGGGGCTGGAGGCCCAGTGTGCAGCTCTTCCTCCCCGGAGACTCGGGGGCTGGTCGGGGCATCTGTAGGCACTGGGTCAAAGGT

CircID chr19:55231598|55231967
ORF Type ORF4
Protein Length 121
Nucleotide Length 363
Protein Sequence MTQCLQMPRPAPESPGRKSCTLGLQPHRGPSVCPRASPLRAWPALLPVTPCSSGENRMERAKWCWYPEARRWPWGPRPLIGSSANPSCPLGLPLSPTRSQDPTPPSAPQEATEGSKVTEPS
Nucleotide Sequence TTGACCCAGTGCCTACAGATGCCCCGACCAGCCCCCGAGTCTCCGGGGAGGAAGAGCTGCACACTGGGCCTCCAGCCCCACAGGGGCCCCTCAGTGTGCCCCAGGGCCTCCCCACTCAGAGCCTGGCCAGCCCTCCTGCCCGTGACGCCCTGCAGCTCAGGTGAGAACCGGATGGAACGGGCTAAATGGTGCTGGTATCCCGAGGCCAGGAGGTGGCCATGGGGTCCCCGTCCTCTCATAGGCTCGAGTGCTAACCCTAGCTGCCCCCTTGGGCTGCCTCTCTCGCCTACCAGGTCTCAGGACCCCACACCCCCCTCAGCACCTCAGGAAGCCACAGAAGGCAGCAAAGTCACGGAGCCCTCA

CircID chr19:55231598|55231967
ORF Type ORF5
Protein Length 32
Nucleotide Length 96
Protein Sequence MGCLSRLPGLRTPHPPQHLRKPQKAAKSRSPQ
Nucleotide Sequence TTGGGCTGCCTCTCTCGCCTACCAGGTCTCAGGACCCCACACCCCCCTCAGCACCTCAGGAAGCCACAGAAGGCAGCAAAGTCACGGAGCCCTCAG

CircID chr19:55231598|55231967
ORF Type ORF6
Protein Length 35
Nucleotide Length 108
Protein Sequence MHTGPPAPQGPLSVPQGLPTQSLASPPARDALQLR
Nucleotide Sequence CTGCACACTGGGCCTCCAGCCCCACAGGGGCCCCTCAGTGTGCCCCAGGGCCTCCCCACTCAGAGCCTGGCCAGCCCTCCTGCCCGTGACGCCCTGCAGCTCAGGTGA

CircID chr19:55231598|55231967
ORF Type ORF7
Protein Length 34
Nucleotide Length 102
Protein Sequence MPPWAASLAYQVSGPHTPLSTSGSHRRQQSHGAL
Nucleotide Sequence CTGCCCCCTTGGGCTGCCTCTCTCGCCTACCAGGTCTCAGGACCCCACACCCCCCTCAGCACCTCAGGAAGCCACAGAAGGCAGCAAAGTCACGGAGCCCTC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites