CircNet

General Information

circRNA Basic Information

CircID	chr19:55384823\|55384945
Strand	+
CircType	exon
Host Gene
Algorism	CIRI2;
Sequence	CTCCCCAGGGCTCCTTAACTTGCGGTTACACCCGGGCACTCCTTGGGGCAGGGGCTTCGTCTGGTCCATAGGACTATCCTCCATAGGACAGTCGGGGTTCGCCCAGCTTCCTCCACGGGTGCG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:55384823\|55384945	hsa-miR-765	0	0	1
chr19:55384823\|55384945	hsa-miR-939-5p	0	0	1
chr19:55384823\|55384945	hsa-miR-939-3p	0	0	1
chr19:55384823\|55384945	hsa-miR-324-3p	0	0	1
chr19:55384823\|55384945	hsa-miR-1233	0	0	1
chr19:55384823\|55384945	hsa-miR-1185	0	0	1
chr19:55384823\|55384945	hsa-miR-661	1	0	0
chr19:55384823\|55384945	hsa-miR-1471	1	0	0
chr19:55384823\|55384945	hsa-miR-1538	1	0	0
chr19:55384823\|55384945	hsa-miR-3137	1	0	0
chr19:55384823\|55384945	hsa-miR-4486	0	1	0
chr19:55384823\|55384945	hsa-miR-4669	1	0	0
chr19:55384823\|55384945	hsa-miR-4739	1	0	0
chr19:55384823\|55384945	hsa-miR-6129	0	1	0
chr19:55384823\|55384945	hsa-miR-4433b-3p	0	1	0
chr19:55384823\|55384945	hsa-miR-1247-3p	1	0	0
chr19:55384823\|55384945	hsa-miR-6894-5p	1	1	0
chr19:55384823\|55384945	hsa-miR-210-5p	0	1	0
chr19:55384823\|55384945	hsa-miR-766-5p	0	1	0
chr19:55384823\|55384945	hsa-miR-7114-5p	0	1	0
chr19:55384823\|55384945	hsa-miR-6880-5p	0	1	0
chr19:55384823\|55384945	hsa-miR-7847-3p	0	1	0
chr19:55384823\|55384945	hsa-miR-4695-5p	0	1	0
chr19:55384823\|55384945	hsa-miR-3189-5p	1	0	0
chr19:55384823\|55384945	hsa-miR-6772-5p	1	1	0
chr19:55384823\|55384945	hsa-miR-1909-5p	1	1	0
chr19:55384823\|55384945	hsa-miR-4732-3p	0	1	0
chr19:55384823\|55384945	hsa-miR-6752-3p	0	1	0
chr19:55384823\|55384945	hsa-miR-4802-5p	0	1	0
chr19:55384823\|55384945	hsa-miR-4726-5p	1	0	0
chr19:55384823\|55384945	hsa-miR-4664-5p	1	0	0
chr19:55384823\|55384945	hsa-miR-550a-5p	1	0	0
chr19:55384823\|55384945	hsa-miR-6810-3p	0	1	0
chr19:55384823\|55384945	hsa-miR-129-1-3p	0	1	0
chr19:55384823\|55384945	hsa-miR-129-2-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:55384823\|55384945
ORF Type	ORF1
Protein Length	27
Nucleotide Length	81
Protein Sequence	MGQGLRLVHRTILHRTVGVRPASSTGA
Nucleotide Sequence	TTGGGGCAGGGGCTTCGTCTGGTCCATAGGACTATCCTCCATAGGACAGTCGGGGTTCGCCCAGCTTCCTCCACGGGTGCG

CircID	chr19:55384823\|55384945
ORF Type	ORF2
Protein Length	34
Nucleotide Length	102
Protein Sequence	MRLHPGTPWGRGFVWSIGLSSIGQSGFAQLPPRV
Nucleotide Sequence	TTGCGGTTACACCCGGGCACTCCTTGGGGCAGGGGCTTCGTCTGGTCCATAGGACTATCCTCCATAGGACAGTCGGGGTTCGCCCAGCTTCCTCCACGGGTG

CircID	chr19:55384823\|55384945
ORF Type	ORF3
Protein Length	28
Nucleotide Length	84
Protein Sequence	MEDSPMDQTKPLPQGVPGCNRKLRSPGE
Nucleotide Sequence	ATGGAGGATAGTCCTATGGACCAGACGAAGCCCCTGCCCCAAGGAGTGCCCGGGTGTAACCGCAAGTTAAGGAGCCCTGGGGAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information