CircNet

General Information

circRNA Basic Information

CircID	chr19:5609995\|5613527
Strand	-
CircType	exon
Host Gene	ENSG00000130254.11;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTGGATGGGGAAGGATTTAAGAACACTTTGGAAACTTCATCGTTGAACTTCAAAGTAACTCCGGACATTGAAGAATCCCTTTTGGAGCCAGCTCTTTTAAGGAAGAAAAAGATATAAAGCCAATCATTAAAGATGAAAAAGGTCGGGTCGGCAGCGGTTCTGGTCGGAACCTGTGGGTCAGCGGGCTGTCCTCCACAACACGCGCTACGGATCTCAAGAACCTTTTCAGCAAGTATGGGAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:5609995\|5613527
ORF Type	ORF1
Protein Length	36
Nucleotide Length	108
Protein Sequence	MKKVGSAAVLVGTCGSAGCPPQHALRISRTFSASMG
Nucleotide Sequence	ATGAAAAAGGTCGGGTCGGCAGCGGTTCTGGTCGGAACCTGTGGGTCAGCGGGCTGTCCTCCACAACACGCGCTACGGATCTCAAGAACCTTTTCAGCAAGTATGGGA

CircID	chr19:5609995\|5613527
ORF Type	ORF2
Protein Length	57
Nucleotide Length	171
Protein Sequence	RIPFGASSFKEEKDIKPIIKDEKGRVGSGSGRNLWVSGLSSTTRATDLKNLFSKYGK
Nucleotide Sequence	AGAATCCCTTTTGGAGCCAGCTCTTTTAAGGAAGAAAAAGATATAAAGCCAATCATTAAAGATGAAAAAGGTCGGGTCGGCAGCGGTTCTGGTCGGAACCTGTGGGTCAGCGGGCTGTCCTCCACAACACGCGCTACGGATCTCAAGAACCTTTTCAGCAAGTATGGGAAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr19:5609995\|5613527	FMR1	0	0	5
chr19:5609995\|5613527	NOP56	0	3	0
chr19:5609995\|5613527	ELAVL1	10	3	1
chr19:5609995\|5613527	ZRANB2	0	0	1
chr19:5609995\|5613527	SF3B4	1	0	7
chr19:5609995\|5613527	SF3B1	0	0	1
chr19:5609995\|5613527	SRRM4	0	1	0
chr19:5609995\|5613527	PRPF8	0	1	3
chr19:5609995\|5613527	DDX54	1	1	8
chr19:5609995\|5613527	CPSF7	0	0	1
chr19:5609995\|5613527	CPSF6	1	1	0
chr19:5609995\|5613527	NUDT21	1	0	1
chr19:5609995\|5613527	GPKOW	0	0	2
chr19:5609995\|5613527	CPSF1	0	1	0
chr19:5609995\|5613527	FUS	0	1	0
chr19:5609995\|5613527	SRSF1	1	0	4
chr19:5609995\|5613527	NOP58	1	3	4
chr19:5609995\|5613527	CSTF2	1	0	0
chr19:5609995\|5613527	U2AF1	0	1	2
chr19:5609995\|5613527	ADAR	1	1	0
chr19:5609995\|5613527	U2AF2	7	9	12
chr19:5609995\|5613527	SRSF9	0	0	1
chr19:5609995\|5613527	HNRNPU	1	0	0
chr19:5609995\|5613527	ZNF622	0	1	1
chr19:5609995\|5613527	EFTUD2	1	0	1
chr19:5609995\|5613527	GRWD1	0	1	3
chr19:5609995\|5613527	RBM10	1	4	0
chr19:5609995\|5613527	HNRNPA2B1	0	1	0
chr19:5609995\|5613527	SF3A3	0	0	3
chr19:5609995\|5613527	FIP1L1	0	0	1
chr19:5609995\|5613527	PTBP1	0	1	1
chr19:5609995\|5613527	HNRNPC	25	3	4
chr19:5609995\|5613527	TRA2A	0	5	4
chr19:5609995\|5613527	DHX9	1	0	0
chr19:5609995\|5613527	SMNDC1	0	0	3
chr19:5609995\|5613527	HNRNPA1	6	2	0
chr19:5609995\|5613527	BCCIP	0	0	1
chr19:5609995\|5613527	NUMA1	1	0	0
chr19:5609995\|5613527	SND1	0	0	1
chr19:5609995\|5613527	UCHL5	0	0	2
chr19:5609995\|5613527	GTF2F1	0	1	0
chr19:5609995\|5613527	IGF2BP3	0	0	1
chr19:5609995\|5613527	IGF2BP2	1	1	7
chr19:5609995\|5613527	TARDBP	7	1	1
chr19:5609995\|5613527	STAU1	1	1	0
chr19:5609995\|5613527	FBL	1	2	3
chr19:5609995\|5613527	BUD13	0	1	2
chr19:5609995\|5613527	DDX24	0	0	1
chr19:5609995\|5613527	AARS	0	0	1
chr19:5609995\|5613527	CSTF2T	0	0	1
chr19:5609995\|5613527	FXR2	0	0	2
chr19:5609995\|5613527	YWHAG	0	0	1
chr19:5609995\|5613527	XRN2	0	0	5
chr19:5609995\|5613527	PPIG	0	0	1
chr19:5609995\|5613527	AGO2	1	2	1
chr19:5609995\|5613527	EWSR1	1	0	0
chr19:5609995\|5613527	EIF4A3	5	3	5
chr19:5609995\|5613527	SRSF10	0	0	1

CircRNA Information