CircRNA Information

General Information
circRNA Basic Information
CircID chr19:56494686|56495038
Strand -
CircType exon
Host Gene ENSG00000166770.9;
Algorism CIRI2;
Sequence TCTACCCATTAAACGACTTCCCATCTTCCCATCCCCACAGCTCCTAGCAACCAACATTCTACTTTCTCTATCAGTTTGACTACTCTAGGTACCTCATATGAGTAGAATCATACAGCATTTATCCTTCTCTGCCTGGCTTATTTCACTTGTATAATGTCCTCAAGGTTCATTCATGTTGTAGCATGCATCAGAACTTCCTCCCCTTTTAAAGGCTGGATAATATTTCATGGTATGTTTAGATCACATTCTGTTTATCCATTCATCCATCAGTGAACACTTGTGCTCCTTCCAACTTTGGGCTGTTGGGTGTCCTGCCACTGTTGCTCCTAGTGCTCAATCTCGTTTATTCCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:56494686|56495038 hsa-let-7b-5p 0 0 1
chr19:56494686|56495038 hsa-let-7b-3p 0 0 1
chr19:56494686|56495038 hsa-let-7c-5p 0 0 1
chr19:56494686|56495038 hsa-let-7c-3p 0 0 1
chr19:56494686|56495038 hsa-let-7d-5p 0 0 1
chr19:56494686|56495038 hsa-let-7d-3p 0 0 1
chr19:56494686|56495038 hsa-let-7e-5p 0 0 1
chr19:56494686|56495038 hsa-let-7e-3p 0 0 1
chr19:56494686|56495038 hsa-miR-98-5p 0 0 1
chr19:56494686|56495038 hsa-miR-98-3p 0 0 1
chr19:56494686|56495038 hsa-miR-221-5p 0 0 1
chr19:56494686|56495038 hsa-miR-221-3p 0 0 1
chr19:56494686|56495038 hsa-miR-222-5p 0 0 1
chr19:56494686|56495038 hsa-miR-222-3p 0 0 1
chr19:56494686|56495038 hsa-let-7g-5p 0 0 1
chr19:56494686|56495038 hsa-let-7g-3p 0 0 1
chr19:56494686|56495038 hsa-let-7i-5p 0 0 1
chr19:56494686|56495038 hsa-let-7i-3p 0 0 1
chr19:56494686|56495038 hsa-miR-381-5p 0 0 1
chr19:56494686|56495038 hsa-miR-381-3p 0 0 1
chr19:56494686|56495038 hsa-miR-202-5p 0 0 1
chr19:56494686|56495038 hsa-miR-202-3p 0 0 1
chr19:56494686|56495038 hsa-miR-656-5p 0 0 1
chr19:56494686|56495038 hsa-miR-656-3p 0 0 1
chr19:56494686|56495038 hsa-miR-300 0 0 1
chr19:56494686|56495038 hsa-miR-708-5p 0 0 1
chr19:56494686|56495038 hsa-miR-708-3p 0 0 1
chr19:56494686|56495038 hsa-miR-1286 0 0 1
chr19:56494686|56495038 hsa-miR-1255a 0 0 1
chr19:56494686|56495038 hsa-miR-1261 0 0 1
chr19:56494686|56495038 hsa-miR-1197 0 0 1
chr19:56494686|56495038 hsa-miR-491-5p 0 0 1
chr19:56494686|56495038 hsa-miR-1224-5p 0 0 1
chr19:56494686|56495038 hsa-miR-28-5p 0 0 1
chr19:56494686|56495038 hsa-miR-409-3p 0 0 1
chr19:56494686|56495038 hsa-miR-1207-5p 1 0 1
chr19:56494686|56495038 hsa-miR-1255b 0 0 1
chr19:56494686|56495038 hsa-let-7a 0 0 1
chr19:56494686|56495038 hsa-let-7f 0 0 1
chr19:56494686|56495038 hsa-miR-608 1 0 0
chr19:56494686|56495038 hsa-miR-762 1 0 0
chr19:56494686|56495038 hsa-miR-765 1 0 0
chr19:56494686|56495038 hsa-miR-760 1 0 0
chr19:56494686|56495038 hsa-miR-920 1 0 0
chr19:56494686|56495038 hsa-miR-1268a 1 0 0
chr19:56494686|56495038 hsa-miR-1270 1 0 0
chr19:56494686|56495038 hsa-miR-3132 1 0 0
chr19:56494686|56495038 hsa-miR-4271 1 0 0
chr19:56494686|56495038 hsa-miR-3646 1 0 0
chr19:56494686|56495038 hsa-miR-3911 1 0 0
chr19:56494686|56495038 hsa-miR-3937 1 0 0
chr19:56494686|56495038 hsa-miR-1268b 1 0 0
chr19:56494686|56495038 hsa-miR-4447 1 0 0
chr19:56494686|56495038 hsa-miR-4450 1 0 0
chr19:56494686|56495038 hsa-miR-3689c 1 0 0
chr19:56494686|56495038 hsa-miR-2392 1 0 0
chr19:56494686|56495038 hsa-miR-4510 1 0 0
chr19:56494686|56495038 hsa-miR-4525 1 0 0
chr19:56494686|56495038 hsa-miR-4534 1 0 0
chr19:56494686|56495038 hsa-miR-4651 1 0 0
chr19:56494686|56495038 hsa-miR-4656 1 0 0
chr19:56494686|56495038 hsa-miR-4673 1 0 0
chr19:56494686|56495038 hsa-miR-4688 1 0 0
chr19:56494686|56495038 hsa-miR-4692 1 0 0
chr19:56494686|56495038 hsa-miR-4706 1 0 0
chr19:56494686|56495038 hsa-miR-4739 1 0 0
chr19:56494686|56495038 hsa-miR-4741 1 0 0
chr19:56494686|56495038 hsa-miR-4751 1 0 0
chr19:56494686|56495038 hsa-miR-5093 1 0 0
chr19:56494686|56495038 hsa-miR-5191 1 0 0
chr19:56494686|56495038 hsa-miR-5685 0 1 0
chr19:56494686|56495038 hsa-miR-5787 1 0 0
chr19:56494686|56495038 hsa-miR-6081 1 0 0
chr19:56494686|56495038 hsa-miR-6085 1 0 0
chr19:56494686|56495038 hsa-miR-6086 1 0 0
chr19:56494686|56495038 hsa-miR-7515 1 0 0
chr19:56494686|56495038 hsa-miR-8055 1 1 0
chr19:56494686|56495038 hsa-miR-8085 1 0 0
chr19:56494686|56495038 hsa-miR-8089 1 0 0
chr19:56494686|56495038 hsa-miR-9500 1 0 0
chr19:56494686|56495038 hsa-miR-135a-3p 1 0 0
chr19:56494686|56495038 hsa-miR-4433b-3p 1 0 0
chr19:56494686|56495038 hsa-miR-6734-5p 1 0 0
chr19:56494686|56495038 hsa-miR-3157-5p 1 0 0
chr19:56494686|56495038 hsa-miR-3150a-3p 1 0 0
chr19:56494686|56495038 hsa-miR-7106-5p 1 1 0
chr19:56494686|56495038 hsa-miR-6825-5p 0 1 0
chr19:56494686|56495038 hsa-miR-6894-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6857-5p 1 0 0
chr19:56494686|56495038 hsa-miR-1972 1 0 0
chr19:56494686|56495038 hsa-miR-4687-3p 1 0 0
chr19:56494686|56495038 hsa-miR-6720-5p 0 1 0
chr19:56494686|56495038 hsa-miR-187-5p 0 1 0
chr19:56494686|56495038 hsa-miR-6799-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6728-5p 1 0 0
chr19:56494686|56495038 hsa-miR-5187-5p 1 0 0
chr19:56494686|56495038 hsa-miR-3663-3p 1 0 0
chr19:56494686|56495038 hsa-miR-3192-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6757-5p 1 0 0
chr19:56494686|56495038 hsa-miR-4653-3p 1 0 0
chr19:56494686|56495038 hsa-miR-6730-5p 1 0 0
chr19:56494686|56495038 hsa-miR-4755-3p 1 0 0
chr19:56494686|56495038 hsa-miR-6741-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6727-5p 1 0 0
chr19:56494686|56495038 hsa-miR-3622b-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6759-5p 1 0 0
chr19:56494686|56495038 hsa-miR-197-5p 1 0 0
chr19:56494686|56495038 hsa-miR-8069 1 0 0
chr19:56494686|56495038 hsa-miR-6776-5p 1 0 0
chr19:56494686|56495038 hsa-miR-148a-5p 0 1 0
chr19:56494686|56495038 hsa-miR-6742-5p 1 0 0
chr19:56494686|56495038 hsa-miR-3605-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6716-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6871-5p 1 0 0
chr19:56494686|56495038 hsa-miR-3151-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6748-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6796-5p 1 1 0
chr19:56494686|56495038 hsa-miR-6732-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6760-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6782-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6810-5p 1 0 0
chr19:56494686|56495038 hsa-miR-30b-3p 1 0 0
chr19:56494686|56495038 hsa-miR-6786-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6835-5p 1 0 0
chr19:56494686|56495038 hsa-miR-1226-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6853-5p 1 0 0
chr19:56494686|56495038 hsa-miR-204-3p 1 0 0
chr19:56494686|56495038 hsa-miR-92b-5p 1 0 0
chr19:56494686|56495038 hsa-miR-877-5p 1 0 0
chr19:56494686|56495038 hsa-miR-4732-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6501-5p 1 0 0
chr19:56494686|56495038 hsa-miR-4787-5p 1 0 0
chr19:56494686|56495038 hsa-miR-149-3p 1 0 0
chr19:56494686|56495038 hsa-miR-3616-3p 1 0 0
chr19:56494686|56495038 hsa-miR-6824-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6789-5p 1 0 0
chr19:56494686|56495038 hsa-miR-3162-5p 1 0 0
chr19:56494686|56495038 hsa-miR-2276-3p 1 0 0
chr19:56494686|56495038 hsa-miR-6878-5p 1 0 0
chr19:56494686|56495038 hsa-miR-5010-5p 1 0 0
chr19:56494686|56495038 hsa-miR-5584-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6869-5p 1 0 0
chr19:56494686|56495038 hsa-miR-1244 1 0 0
chr19:56494686|56495038 hsa-miR-1273h-5p 1 0 0
chr19:56494686|56495038 hsa-miR-3689b-3p 1 0 0
chr19:56494686|56495038 hsa-miR-4763-3p 1 0 0
chr19:56494686|56495038 hsa-miR-6778-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6812-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6870-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6893-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6726-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6737-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6743-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6752-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6756-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6769a-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6803-5p 1 1 0
chr19:56494686|56495038 hsa-miR-6813-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6819-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6842-5p 1 0 0
chr19:56494686|56495038 hsa-miR-7110-5p 1 0 0
chr19:56494686|56495038 hsa-miR-10401-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6751-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6763-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6774-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6779-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6797-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6808-5p 1 0 0
chr19:56494686|56495038 hsa-miR-7111-5p 1 0 0
chr19:56494686|56495038 hsa-miR-4728-5p 1 0 0
chr19:56494686|56495038 hsa-miR-5189-5p 1 0 0
chr19:56494686|56495038 hsa-miR-5196-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6780b-5p 1 0 0
chr19:56494686|56495038 hsa-miR-10526-3p 0 1 0
chr19:56494686|56495038 hsa-miR-1237-5p 1 0 0
chr19:56494686|56495038 hsa-miR-3689a-3p 1 0 0
chr19:56494686|56495038 hsa-miR-4725-3p 1 0 0
chr19:56494686|56495038 hsa-miR-6777-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6858-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6889-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6831-5p 1 0 0
chr19:56494686|56495038 hsa-miR-939-5p 1 0 0
chr19:56494686|56495038 hsa-miR-1910-3p 1 0 0
chr19:56494686|56495038 hsa-miR-6856-5p 1 0 0
chr19:56494686|56495038 hsa-miR-4700-5p 1 0 0
chr19:56494686|56495038 hsa-miR-3679-5p 1 0 0
chr19:56494686|56495038 hsa-miR-4646-5p 1 0 0
chr19:56494686|56495038 hsa-miR-4747-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6876-5p 1 0 0
chr19:56494686|56495038 hsa-miR-4472 1 0 0
chr19:56494686|56495038 hsa-miR-6750-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6785-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6849-5p 0 1 0
chr19:56494686|56495038 hsa-miR-5591-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6791-5p 1 0 0
chr19:56494686|56495038 hsa-miR-769-3p 1 0 0
chr19:56494686|56495038 hsa-miR-6512-3p 0 1 0
chr19:56494686|56495038 hsa-miR-135a-2-3p 1 0 0
chr19:56494686|56495038 hsa-miR-1301-5p 1 0 0
chr19:56494686|56495038 hsa-miR-6838-5p 1 1 0
chr19:56494686|56495038 hsa-miR-181b-2-3p 0 1 0
chr19:56494686|56495038 hsa-miR-181b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr19:56494686|56495038
ORF Type ORF1
Protein Length 46
Nucleotide Length 141
Protein Sequence MAYFTCIMSSRFIHVVACIRTSSPFKGWIIFHGMFRSHSVYPFIHQ
Nucleotide Sequence CTGGCTTATTTCACTTGTATAATGTCCTCAAGGTTCATTCATGTTGTAGCATGCATCAGAACTTCCTCCCCTTTTAAAGGCTGGATAATATTTCATGGTATGTTTAGATCACATTCTGTTTATCCATTCATCCATCAGTGA
CircID chr19:56494686|56495038
ORF Type ORF2
Protein Length 42
Nucleotide Length 126
Protein Sequence MVCLDHILFIHSSISEHLCSFQLWAVGCPATVAPSAQSRLFP
Nucleotide Sequence ATGGTATGTTTAGATCACATTCTGTTTATCCATTCATCCATCAGTGAACACTTGTGCTCCTTCCAACTTTGGGCTGTTGGGTGTCCTGCCACTGTTGCTCCTAGTGCTCAATCTCGTTTATTCCCT
CircID chr19:56494686|56495038
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MPGLFHLYNVLKVHSCCSMHQNFLPF
Nucleotide Sequence CTGCCTGGCTTATTTCACTTGTATAATGTCCTCAAGGTTCATTCATGTTGTAGCATGCATCAGAACTTCCTCCCCTTTTAA
CircID chr19:56494686|56495038
ORF Type ORF4
Protein Length 25
Nucleotide Length 78
Protein Sequence MSTRSNSGRTPNSPKLEGAQVFTDG
Nucleotide Sequence TTGAGCACTAGGAGCAACAGTGGCAGGACACCCAACAGCCCAAAGTTGGAAGGAGCACAAGTGTTCACTGATGGATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab