CircNet

General Information

circRNA Basic Information

CircID	chr19:56554966\|56555090
Strand	+
CircType	exon
Host Gene	ENSG00000196867.6;
Algorism	CIRI2;
Sequence	GATGACTAAAGGCTTTGCCACACACACTGCATTCATAAGGTTTTTCTCCAGTATGACTTCTGCGATGACAAATAAGGGAGGATTTTGTCTTGAATGCCTTTCCACACTCAATACATTCATAAGGT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:56554966\|56555090	hsa-miR-298	0	0	1
chr19:56554966\|56555090	hsa-miR-1243	0	0	1
chr19:56554966\|56555090	hsa-miR-574-5p	0	0	1
chr19:56554966\|56555090	hsa-miR-548d-3p	0	0	1
chr19:56554966\|56555090	hsa-miR-644	0	0	1
chr19:56554966\|56555090	hsa-miR-147	0	0	1
chr19:56554966\|56555090	hsa-miR-147a	0	1	0
chr19:56554966\|56555090	hsa-miR-3135b	1	0	0
chr19:56554966\|56555090	hsa-miR-3978	0	1	0
chr19:56554966\|56555090	hsa-miR-4658	0	1	0
chr19:56554966\|56555090	hsa-miR-6747-5p	1	0	0
chr19:56554966\|56555090	hsa-miR-6867-5p	0	1	0
chr19:56554966\|56555090	hsa-miR-6759-5p	1	0	0
chr19:56554966\|56555090	hsa-miR-3688-5p	0	1	0
chr19:56554966\|56555090	hsa-miR-10401-5p	1	1	0
chr19:56554966\|56555090	hsa-miR-6790-5p	1	1	0
chr19:56554966\|56555090	hsa-miR-6507-3p	0	1	0
chr19:56554966\|56555090	hsa-miR-3910	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:56554966\|56555090
ORF Type	ORF1
Protein Length	41
Nucleotide Length	123
Protein Sequence	MTKGFATHTAFIRFFSSMTSAMTNKGGFCLECLSTLNTFIR
Nucleotide Sequence	ATGACTAAAGGCTTTGCCACACACACTGCATTCATAAGGTTTTTCTCCAGTATGACTTCTGCGATGACAAATAAGGGAGGATTTTGTCTTGAATGCCTTTCCACACTCAATACATTCATAAGG

CircID	chr19:56554966\|56555090
ORF Type	ORF2
Protein Length	40
Nucleotide Length	120
Protein Sequence	MNVLSVERHSRQNPPLFVIAEVILEKNLMNAVCVAKPLVI
Nucleotide Sequence	ATGAATGTATTGAGTGTGGAAAGGCATTCAAGACAAAATCCTCCCTTATTTGTCATCGCAGAAGTCATACTGGAGAAAAACCTTATGAATGCAGTGTGTGTGGCAAAGCCTTTAGTCATC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information