CircNet

General Information

circRNA Basic Information

CircID	chr19:57641602\|57641768
Strand	+
CircType	exon
Host Gene	ENSG00000121417.12;
Algorism	CIRI2;
Sequence	TGCACTCATAGGGTCTTTCTCCAGTGTGAAGTCTCCGGTGGTGAATGAGGCTGGAGCTTCGGCTAAAGGATTTTCCACATTCATTGCACTCATGAGGTCTTTCTCCAGTGTGAACTCTCTGGTGGTAGATCAGGCTAAAGTTTTGGCTAAAAGATTTCCCACATTCG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:57641602\|57641768	hsa-miR-197-5p	0	0	1
chr19:57641602\|57641768	hsa-miR-197-3p	0	0	1
chr19:57641602\|57641768	hsa-miR-130a-5p	0	0	1
chr19:57641602\|57641768	hsa-miR-130a-3p	0	0	1
chr19:57641602\|57641768	hsa-miR-301a-5p	0	0	1
chr19:57641602\|57641768	hsa-miR-301a-3p	0	0	1
chr19:57641602\|57641768	hsa-miR-130b-5p	0	0	1
chr19:57641602\|57641768	hsa-miR-130b-3p	0	0	1
chr19:57641602\|57641768	hsa-miR-377-5p	0	0	1
chr19:57641602\|57641768	hsa-miR-377-3p	0	0	1
chr19:57641602\|57641768	hsa-miR-596	0	0	1
chr19:57641602\|57641768	hsa-miR-1323	0	0	1
chr19:57641602\|57641768	hsa-miR-454-5p	0	0	1
chr19:57641602\|57641768	hsa-miR-454-3p	0	0	1
chr19:57641602\|57641768	hsa-miR-766-5p	0	0	1
chr19:57641602\|57641768	hsa-miR-766-3p	0	0	1
chr19:57641602\|57641768	hsa-miR-301b-5p	0	0	1
chr19:57641602\|57641768	hsa-miR-301b-3p	0	0	1
chr19:57641602\|57641768	hsa-miR-548o-3p	0	0	1
chr19:57641602\|57641768	hsa-miR-548o	0	0	1
chr19:57641602\|57641768	hsa-miR-299-3p	0	0	1
chr19:57641602\|57641768	hsa-miR-501-5p	0	0	1
chr19:57641602\|57641768	hsa-miR-220b	0	0	1
chr19:57641602\|57641768	hsa-miR-500	0	0	1
chr19:57641602\|57641768	hsa-miR-1201	0	0	1
chr19:57641602\|57641768	hsa-miR-2110	1	1	0
chr19:57641602\|57641768	hsa-miR-548s	0	1	0
chr19:57641602\|57641768	hsa-miR-4531	0	1	0
chr19:57641602\|57641768	hsa-miR-4657	0	1	0
chr19:57641602\|57641768	hsa-miR-5091	0	1	0
chr19:57641602\|57641768	hsa-miR-8085	1	0	0
chr19:57641602\|57641768	hsa-miR-6720-5p	0	1	0
chr19:57641602\|57641768	hsa-miR-139-3p	1	0	0
chr19:57641602\|57641768	hsa-miR-6849-3p	0	1	0
chr19:57641602\|57641768	hsa-miR-3667-5p	0	1	0
chr19:57641602\|57641768	hsa-miR-3191-3p	1	0	0
chr19:57641602\|57641768	hsa-miR-4668-3p	0	1	0
chr19:57641602\|57641768	hsa-miR-1233-5p	1	0	0
chr19:57641602\|57641768	hsa-miR-3928-5p	0	1	0
chr19:57641602\|57641768	hsa-miR-6806-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:57641602\|57641768
ORF Type	ORF1
Protein Length	25
Nucleotide Length	75
Protein Sequence	MRSFSSVNSLVVDQAKVLAKRFPTF
Nucleotide Sequence	ATGAGGTCTTTCTCCAGTGTGAACTCTCTGGTGGTAGATCAGGCTAAAGTTTTGGCTAAAAGATTTCCCACATTC

CircID	chr19:57641602\|57641768
ORF Type	ORF2
Protein Length	44
Nucleotide Length	132
Protein Sequence	MIYHQRVHTGERPHECNECGKSFSRSSSLIHHRRLHTGERPYEC
Nucleotide Sequence	CTGATCTACCACCAGAGAGTTCACACTGGAGAAAGACCTCATGAGTGCAATGAATGTGGAAAATCCTTTAGCCGAAGCTCCAGCCTCATTCACCACCGGAGACTTCACACTGGAGAAAGACCCTATGAGTGC

CircID	chr19:57641602\|57641768
ORF Type	ORF3
Protein Length	36
Nucleotide Length	108
Protein Sequence	MEKDLMSAMNVENPLAEAPASFTTGDFTLEKDPMSA
Nucleotide Sequence	CTGGAGAAAGACCTCATGAGTGCAATGAATGTGGAAAATCCTTTAGCCGAAGCTCCAGCCTCATTCACCACCGGAGACTTCACACTGGAGAAAGACCCTATGAGTGCA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information