CircNet

General Information

circRNA Basic Information

CircID	chr19:58392994\|58393185
Strand	+
CircType	exon
Host Gene	ENSG00000083845.7;
Algorism	CIRI2;
Sequence	CTCGCCTGTGAGCAGGTGTATGATCTCGAAGGCATGCTTGACGATGCGCACAGTCATGAGCTTCTTGCCGTTGTTGCGGCCGTGCATCATCATGGAGTTAGTGAGGCGCTCCACAATGGGACACTGAGCTTTGCGGAAGCGTTTGGCGGCATACCGCCCTGCACTGTGAGGCAGGTACTTGGCATACTTCTC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	targetScan
chr19:58392994\|58393185	hsa-miR-27a-5p	0	1
chr19:58392994\|58393185	hsa-miR-27a-3p	0	1
chr19:58392994\|58393185	hsa-miR-31-5p	0	1
chr19:58392994\|58393185	hsa-miR-31-3p	0	1
chr19:58392994\|58393185	hsa-miR-148a-5p	0	1
chr19:58392994\|58393185	hsa-miR-148a-3p	0	1
chr19:58392994\|58393185	hsa-miR-27b-5p	0	1
chr19:58392994\|58393185	hsa-miR-27b-3p	0	1
chr19:58392994\|58393185	hsa-miR-152-5p	0	1
chr19:58392994\|58393185	hsa-miR-152-3p	0	1
chr19:58392994\|58393185	hsa-miR-148b-5p	0	1
chr19:58392994\|58393185	hsa-miR-148b-3p	0	1
chr19:58392994\|58393185	hsa-miR-487a-5p	0	1
chr19:58392994\|58393185	hsa-miR-487a-3p	0	1
chr19:58392994\|58393185	hsa-miR-933	0	1
chr19:58392994\|58393185	hsa-miR-943	0	1
chr19:58392994\|58393185	hsa-miR-1178-5p	0	1
chr19:58392994\|58393185	hsa-miR-1178-3p	0	1
chr19:58392994\|58393185	hsa-miR-1272	0	1
chr19:58392994\|58393185	hsa-miR-1322	0	1
chr19:58392994\|58393185	hsa-miR-339-3p	0	1
chr19:58392994\|58393185	hsa-miR-532-5p	0	1
chr19:58392994\|58393185	hsa-miR-767-3p	0	1
chr19:58392994\|58393185	hsa-miR-513a-5p	0	1
chr19:58392994\|58393185	hsa-miR-485-3p	0	1
chr19:58392994\|58393185	hsa-miR-128	0	1
chr19:58392994\|58393185	hsa-miR-220c	0	1
chr19:58392994\|58393185	hsa-miR-595	1	0
chr19:58392994\|58393185	hsa-miR-4479	1	0
chr19:58392994\|58393185	hsa-miR-3180-3p	1	0
chr19:58392994\|58393185	hsa-miR-4783-3p	1	0
chr19:58392994\|58393185	hsa-miR-1237-5p	1	0
chr19:58392994\|58393185	hsa-miR-4697-5p	1	0
chr19:58392994\|58393185	hsa-miR-99b-3p	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:58392994\|58393185
ORF Type	ORF1
Protein Length	53
Nucleotide Length	159
Protein Sequence	MLDDAHSHELLAVVAAVHHHGVSEALHNGTLSFAEAFGGIPPCTVRQVLGILL
Nucleotide Sequence	ATGCTTGACGATGCGCACAGTCATGAGCTTCTTGCCGTTGTTGCGGCCGTGCATCATCATGGAGTTAGTGAGGCGCTCCACAATGGGACACTGAGCTTTGCGGAAGCGTTTGGCGGCATACCGCCCTGCACTGTGAGGCAGGTACTTGGCATACTTCTC

CircID	chr19:58392994\|58393185
ORF Type	ORF2
Protein Length	35
Nucleotide Length	108
Protein Sequence	MISKACLTMRTVMSFLPLLRPCIIMELVRRSTMGH
Nucleotide Sequence	ATGATCTCGAAGGCATGCTTGACGATGCGCACAGTCATGAGCTTCTTGCCGTTGTTGCGGCCGTGCATCATCATGGAGTTAGTGAGGCGCTCCACAATGGGACACTGA

CircID	chr19:58392994\|58393185
ORF Type	ORF3
Protein Length	58
Nucleotide Length	174
Protein Sequence	MPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGE
Nucleotide Sequence	CTGCCTCACAGTGCAGGGCGGTATGCCGCCAAACGCTTCCGCAAAGCTCAGTGTCCCATTGTGGAGCGCCTCACTAACTCCATGATGATGCACGGCCGCAACAACGGCAAGAAGCTCATGACTGTGCGCATCGTCAAGCATGCCTTCGAGATCATACACCTGCTCACAGGCGAG

CircID	chr19:58392994\|58393185
ORF Type	ORF4
Protein Length	31
Nucleotide Length	96
Protein Sequence	MPSTCLTVQGGMPPNASAKLSVPLWSASLTP
Nucleotide Sequence	ATGCCAAGTACCTGCCTCACAGTGCAGGGCGGTATGCCGCCAAACGCTTCCGCAAAGCTCAGTGTCCCATTGTGGAGCGCCTCACTAACTCCATGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information