CircRNA Information

General Information
circRNA Basic Information
CircID chr19:58548349|58548576
Strand -
CircType exon
Host Gene ENSG00000130726.10;
Algorism CIRI2;
Sequence ATGGCGAGATGAAGTTTCAGTGGGACCTCAATGCCTGGACCAAGAGTGCCGAGGCCTTTGGTGGGTCCCCAGCTTTACCTCACTCTGTTATTACCCCACGTGCTGCACCTACTTACGTTTCTCTCTTCTTTTTGCAGGCAAGATTGTGGCAGAGCGTCCTGGCACTAACTCAACAGGCCCTGCACCCATGGCCCCTCCAAGAGCCCCAGGGCCCCTGAGCAAGCAGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:58548349|58548576 hsa-let-7b-5p 0 0 1
chr19:58548349|58548576 hsa-let-7b-3p 0 0 1
chr19:58548349|58548576 hsa-let-7c-5p 0 0 1
chr19:58548349|58548576 hsa-let-7c-3p 0 0 1
chr19:58548349|58548576 hsa-let-7d-5p 0 0 1
chr19:58548349|58548576 hsa-let-7d-3p 0 0 1
chr19:58548349|58548576 hsa-let-7e-5p 0 0 1
chr19:58548349|58548576 hsa-let-7e-3p 0 0 1
chr19:58548349|58548576 hsa-miR-98-5p 0 0 1
chr19:58548349|58548576 hsa-miR-98-3p 0 0 1
chr19:58548349|58548576 hsa-miR-107 0 0 1
chr19:58548349|58548576 hsa-let-7g-5p 0 0 1
chr19:58548349|58548576 hsa-let-7g-3p 0 0 1
chr19:58548349|58548576 hsa-let-7i-5p 0 0 1
chr19:58548349|58548576 hsa-let-7i-3p 0 0 1
chr19:58548349|58548576 hsa-miR-320a-5p 0 0 1
chr19:58548349|58548576 hsa-miR-320a-3p 0 0 1
chr19:58548349|58548576 hsa-miR-133b 0 0 1
chr19:58548349|58548576 hsa-miR-202-5p 0 0 1
chr19:58548349|58548576 hsa-miR-202-3p 0 0 1
chr19:58548349|58548576 hsa-miR-432-5p 0 0 1
chr19:58548349|58548576 hsa-miR-432-3p 0 0 1
chr19:58548349|58548576 hsa-miR-519e-5p 0 0 1
chr19:58548349|58548576 hsa-miR-519e-3p 0 0 1
chr19:58548349|58548576 hsa-miR-562 0 0 1
chr19:58548349|58548576 hsa-miR-1178-5p 0 0 1
chr19:58548349|58548576 hsa-miR-1178-3p 0 0 1
chr19:58548349|58548576 hsa-miR-1291 0 0 1
chr19:58548349|58548576 hsa-miR-1294 0 0 1
chr19:58548349|58548576 hsa-miR-1256 0 1 1
chr19:58548349|58548576 hsa-miR-1266-5p 0 0 1
chr19:58548349|58548576 hsa-miR-1266-3p 0 0 1
chr19:58548349|58548576 hsa-miR-1267 0 1 1
chr19:58548349|58548576 hsa-miR-423-5p 0 0 1
chr19:58548349|58548576 hsa-miR-320b 0 0 1
chr19:58548349|58548576 hsa-miR-320c 0 0 1
chr19:58548349|58548576 hsa-miR-515-3p 0 0 1
chr19:58548349|58548576 hsa-miR-320d 0 0 1
chr19:58548349|58548576 hsa-miR-103 0 0 1
chr19:58548349|58548576 hsa-miR-1308 0 0 1
chr19:58548349|58548576 hsa-let-7a 0 0 1
chr19:58548349|58548576 hsa-let-7f 0 0 1
chr19:58548349|58548576 hsa-miR-768-5p 0 0 1
chr19:58548349|58548576 hsa-miR-371-3p 0 0 1
chr19:58548349|58548576 hsa-miR-133a 0 0 1
chr19:58548349|58548576 hsa-miR-637 1 0 0
chr19:58548349|58548576 hsa-miR-760 1 1 0
chr19:58548349|58548576 hsa-miR-3154 1 0 0
chr19:58548349|58548576 hsa-miR-4322 1 0 0
chr19:58548349|58548576 hsa-miR-1268b 1 0 0
chr19:58548349|58548576 hsa-miR-4437 1 0 0
chr19:58548349|58548576 hsa-miR-4440 1 0 0
chr19:58548349|58548576 hsa-miR-4451 0 1 0
chr19:58548349|58548576 hsa-miR-4466 1 0 0
chr19:58548349|58548576 hsa-miR-4489 1 1 0
chr19:58548349|58548576 hsa-miR-4644 1 0 0
chr19:58548349|58548576 hsa-miR-4673 0 1 0
chr19:58548349|58548576 hsa-miR-4688 1 0 0
chr19:58548349|58548576 hsa-miR-4689 1 0 0
chr19:58548349|58548576 hsa-miR-5739 1 0 0
chr19:58548349|58548576 hsa-miR-6124 1 0 0
chr19:58548349|58548576 hsa-miR-8089 1 0 0
chr19:58548349|58548576 hsa-miR-128-1-5p 1 0 0
chr19:58548349|58548576 hsa-miR-4731-5p 0 1 0
chr19:58548349|58548576 hsa-miR-7155-5p 1 0 0
chr19:58548349|58548576 hsa-miR-3194-3p 0 1 0
chr19:58548349|58548576 hsa-miR-4687-3p 1 1 0
chr19:58548349|58548576 hsa-miR-6890-5p 1 0 0
chr19:58548349|58548576 hsa-miR-3187-3p 1 0 0
chr19:58548349|58548576 hsa-miR-6776-5p 1 0 0
chr19:58548349|58548576 hsa-miR-6742-5p 1 0 0
chr19:58548349|58548576 hsa-miR-491-5p 1 0 0
chr19:58548349|58548576 hsa-miR-3151-5p 1 0 0
chr19:58548349|58548576 hsa-miR-659-3p 0 1 0
chr19:58548349|58548576 hsa-miR-6772-5p 1 0 0
chr19:58548349|58548576 hsa-miR-6796-5p 1 0 0
chr19:58548349|58548576 hsa-miR-6827-5p 1 0 0
chr19:58548349|58548576 hsa-miR-23a-5p 1 0 0
chr19:58548349|58548576 hsa-miR-6798-5p 1 0 0
chr19:58548349|58548576 hsa-miR-6760-5p 1 0 0
chr19:58548349|58548576 hsa-miR-6881-5p 1 1 0
chr19:58548349|58548576 hsa-miR-6852-5p 1 1 0
chr19:58548349|58548576 hsa-miR-7109-5p 1 0 0
chr19:58548349|58548576 hsa-miR-6784-5p 1 0 0
chr19:58548349|58548576 hsa-miR-4640-5p 1 0 0
chr19:58548349|58548576 hsa-miR-877-5p 1 0 0
chr19:58548349|58548576 hsa-miR-6749-5p 1 0 0
chr19:58548349|58548576 hsa-miR-6789-5p 1 0 0
chr19:58548349|58548576 hsa-miR-7156-3p 1 0 0
chr19:58548349|58548576 hsa-miR-6869-5p 1 0 0
chr19:58548349|58548576 hsa-miR-1911-3p 1 1 0
chr19:58548349|58548576 hsa-miR-6768-3p 0 1 0
chr19:58548349|58548576 hsa-miR-6812-5p 1 0 0
chr19:58548349|58548576 hsa-miR-6893-5p 1 0 0
chr19:58548349|58548576 hsa-miR-6775-5p 1 0 0
chr19:58548349|58548576 hsa-miR-6743-5p 1 0 0
chr19:58548349|58548576 hsa-miR-6756-5p 1 0 0
chr19:58548349|58548576 hsa-miR-6803-5p 1 0 0
chr19:58548349|58548576 hsa-miR-6813-5p 1 1 0
chr19:58548349|58548576 hsa-miR-6819-5p 1 0 0
chr19:58548349|58548576 hsa-miR-6722-3p 1 0 0
chr19:58548349|58548576 hsa-miR-6779-5p 1 0 0
chr19:58548349|58548576 hsa-miR-6797-5p 1 0 0
chr19:58548349|58548576 hsa-miR-6836-5p 1 0 0
chr19:58548349|58548576 hsa-miR-10396b-5p 1 0 0
chr19:58548349|58548576 hsa-miR-1237-5p 1 0 0
chr19:58548349|58548576 hsa-miR-1909-3p 1 0 0
chr19:58548349|58548576 hsa-miR-328-5p 1 0 0
chr19:58548349|58548576 hsa-miR-4685-5p 0 1 0
chr19:58548349|58548576 hsa-miR-4701-3p 1 0 0
chr19:58548349|58548576 hsa-miR-4726-5p 1 0 0
chr19:58548349|58548576 hsa-miR-4745-5p 1 0 0
chr19:58548349|58548576 hsa-miR-4749-5p 1 0 0
chr19:58548349|58548576 hsa-miR-6738-5p 1 0 0
chr19:58548349|58548576 hsa-miR-675-5p 1 0 0
chr19:58548349|58548576 hsa-miR-6848-5p 0 1 0
chr19:58548349|58548576 hsa-miR-5586-3p 0 1 0
chr19:58548349|58548576 hsa-miR-365a-5p 1 0 0
chr19:58548349|58548576 hsa-miR-3085-5p 1 0 0
chr19:58548349|58548576 hsa-miR-6856-5p 1 1 0
chr19:58548349|58548576 hsa-miR-1914-3p 1 0 0
chr19:58548349|58548576 hsa-miR-6736-5p 1 0 0
chr19:58548349|58548576 hsa-miR-6855-5p 1 0 0
chr19:58548349|58548576 hsa-miR-6791-5p 1 1 0
chr19:58548349|58548576 hsa-miR-6762-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr19:58548349|58548576
ORF Type ORF1
Protein Length 45
Nucleotide Length 138
Protein Sequence MPGPRVPRPLVGPQLYLTLLLPHVLHLLTFLSSFCRQDCGRASWH
Nucleotide Sequence ATGCCTGGACCAAGAGTGCCGAGGCCTTTGGTGGGTCCCCAGCTTTACCTCACTCTGTTATTACCCCACGTGCTGCACCTACTTACGTTTCTCTCTTCTTTTTGCAGGCAAGATTGTGGCAGAGCGTCCTGGCACTAA

CircID chr19:58548349|58548576
ORF Type ORF2
Protein Length 64
Nucleotide Length 192
Protein Sequence MDQECRGLWWVPSFTSLCYYPTCCTYLRFSLLFAGKIVAERPGTNSTGPAPMAPPRAPGPLSKQ
Nucleotide Sequence CTGGACCAAGAGTGCCGAGGCCTTTGGTGGGTCCCCAGCTTTACCTCACTCTGTTATTACCCCACGTGCTGCACCTACTTACGTTTCTCTCTTCTTTTTGCAGGCAAGATTGTGGCAGAGCGTCCTGGCACTAACTCAACAGGCCCTGCACCCATGGCCCCTCCAAGAGCCCCAGGGCCCCTGAGCAAGCAG

CircID chr19:58548349|58548576
ORF Type ORF3
Protein Length 69
Nucleotide Length 210
Protein Sequence MKFQWDLNAWTKSAEAFGGSPALPHSVITPRAAPTYVSLFFLQARLWQSVLALTQQALHPWPLQEPQGP
Nucleotide Sequence ATGAAGTTTCAGTGGGACCTCAATGCCTGGACCAAGAGTGCCGAGGCCTTTGGTGGGTCCCCAGCTTTACCTCACTCTGTTATTACCCCACGTGCTGCACCTACTTACGTTTCTCTCTTCTTTTTGCAGGCAAGATTGTGGCAGAGCGTCCTGGCACTAACTCAACAGGCCCTGCACCCATGGCCCCTCCAAGAGCCCCAGGGCCCCTGA

CircID chr19:58548349|58548576
ORF Type ORF4
Protein Length 37
Nucleotide Length 114
Protein Sequence MLRGPGALGGAMGAGPVELVPGRSATILPAKRREKRK
Nucleotide Sequence TTGCTCAGGGGCCCTGGGGCTCTTGGAGGGGCCATGGGTGCAGGGCCTGTTGAGTTAGTGCCAGGACGCTCTGCCACAATCTTGCCTGCAAAAAGAAGAGAGAAACGTAAGTAG

CircID chr19:58548349|58548576
ORF Type ORF5
Protein Length 25
Nucleotide Length 78
Protein Sequence MPQSCLQKEERNVSRCSTWGNNRVR
Nucleotide Sequence CTGCCACAATCTTGCCTGCAAAAAGAAGAGAGAAACGTAAGTAGGTGCAGCACGTGGGGTAATAACAGAGTGAGGTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites