CircRNA Information

General Information
circRNA Basic Information
CircID chr19:58549117|58549427
Strand -
CircType exon
Host Gene ENSG00000130726.10;
Algorism CIRI2;
Sequence CACTGAGGACTACAACCTTATTGTTATTGAACGTGGCGCTGCCGCTGCAGCTACCGGCCAGCCAGGGACTGCGCCTGCAGGAACCCCTGGTGCCCCACCCCTGGCTGGCATGGCCATTGTCAAGGTAAGCCTGTCCCAAGGAACTATAGCTGTAGGATGAAGCCTGTAGTCCAGGTCTGGACCCTGTTGAACACCCCTCATCACCACCTTGCAGGAGGAGGAGACGGAGGCTGCCATTGGAGCCCCTCCTACTGCCACTGAGGGCCCTGAGACCAAACCTGTGCTTATGGCTCTTGCGGAGGGTCCTGGTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:58549117|58549427 hsa-miR-22-5p 0 0 1
chr19:58549117|58549427 hsa-miR-22-3p 0 0 1
chr19:58549117|58549427 hsa-miR-198 0 1 1
chr19:58549117|58549427 hsa-miR-34a-5p 0 0 1
chr19:58549117|58549427 hsa-miR-34a-3p 0 0 1
chr19:58549117|58549427 hsa-miR-335-5p 0 0 1
chr19:58549117|58549427 hsa-miR-335-3p 0 0 1
chr19:58549117|58549427 hsa-miR-133b 0 0 1
chr19:58549117|58549427 hsa-miR-422a 0 1 1
chr19:58549117|58549427 hsa-miR-449a 0 0 1
chr19:58549117|58549427 hsa-miR-608 1 0 1
chr19:58549117|58549427 hsa-miR-609 0 0 1
chr19:58549117|58549427 hsa-miR-619-5p 0 0 1
chr19:58549117|58549427 hsa-miR-619-3p 0 0 1
chr19:58549117|58549427 hsa-miR-631 0 1 1
chr19:58549117|58549427 hsa-miR-449b-5p 0 0 1
chr19:58549117|58549427 hsa-miR-449b-3p 0 0 1
chr19:58549117|58549427 hsa-miR-421 0 0 1
chr19:58549117|58549427 hsa-miR-1202 0 1 1
chr19:58549117|58549427 hsa-miR-1205 0 0 1
chr19:58549117|58549427 hsa-miR-1266-5p 0 0 1
chr19:58549117|58549427 hsa-miR-1266-3p 0 0 1
chr19:58549117|58549427 hsa-miR-486-3p 0 0 1
chr19:58549117|58549427 hsa-miR-885-3p 0 0 1
chr19:58549117|58549427 hsa-miR-1184 0 0 1
chr19:58549117|58549427 hsa-miR-423-5p 1 0 1
chr19:58549117|58549427 hsa-miR-502-5p 0 0 1
chr19:58549117|58549427 hsa-miR-1302 0 1 1
chr19:58549117|58549427 hsa-miR-34c-5p 0 0 1
chr19:58549117|58549427 hsa-miR-378 0 0 1
chr19:58549117|58549427 hsa-miR-133a 0 0 1
chr19:58549117|58549427 hsa-miR-1470 0 1 0
chr19:58549117|58549427 hsa-miR-3196 1 0 0
chr19:58549117|58549427 hsa-miR-4298 1 1 0
chr19:58549117|58549427 hsa-miR-3661 0 1 0
chr19:58549117|58549427 hsa-miR-3918 0 1 0
chr19:58549117|58549427 hsa-miR-4438 0 1 0
chr19:58549117|58549427 hsa-miR-3135b 1 0 0
chr19:58549117|58549427 hsa-miR-378i 0 1 0
chr19:58549117|58549427 hsa-miR-4767 0 1 0
chr19:58549117|58549427 hsa-miR-5194 0 1 0
chr19:58549117|58549427 hsa-miR-6077 1 0 0
chr19:58549117|58549427 hsa-miR-8089 1 0 0
chr19:58549117|58549427 hsa-miR-9899 1 0 0
chr19:58549117|58549427 hsa-miR-6747-5p 1 1 0
chr19:58549117|58549427 hsa-miR-124-5p 0 1 0
chr19:58549117|58549427 hsa-miR-6822-3p 1 0 0
chr19:58549117|58549427 hsa-miR-6799-5p 1 0 0
chr19:58549117|58549427 hsa-miR-6804-5p 1 0 0
chr19:58549117|58549427 hsa-miR-4722-5p 1 0 0
chr19:58549117|58549427 hsa-miR-6730-5p 1 0 0
chr19:58549117|58549427 hsa-miR-6820-5p 0 1 0
chr19:58549117|58549427 hsa-miR-6727-5p 1 0 0
chr19:58549117|58549427 hsa-miR-6842-3p 0 1 0
chr19:58549117|58549427 hsa-miR-23b-5p 0 1 0
chr19:58549117|58549427 hsa-miR-6849-3p 0 1 0
chr19:58549117|58549427 hsa-miR-7845-5p 1 0 0
chr19:58549117|58549427 hsa-miR-3151-5p 0 1 0
chr19:58549117|58549427 hsa-miR-6796-5p 1 0 0
chr19:58549117|58549427 hsa-miR-185-3p 1 0 0
chr19:58549117|58549427 hsa-miR-6732-5p 1 0 0
chr19:58549117|58549427 hsa-miR-23a-5p 1 1 0
chr19:58549117|58549427 hsa-miR-6782-5p 1 1 0
chr19:58549117|58549427 hsa-miR-3194-5p 0 1 0
chr19:58549117|58549427 hsa-miR-7109-5p 1 0 0
chr19:58549117|58549427 hsa-miR-1226-5p 1 0 0
chr19:58549117|58549427 hsa-miR-4793-5p 1 0 0
chr19:58549117|58549427 hsa-miR-4640-5p 1 0 0
chr19:58549117|58549427 hsa-miR-6753-5p 1 0 0
chr19:58549117|58549427 hsa-miR-3127-5p 0 1 0
chr19:58549117|58549427 hsa-miR-92b-5p 1 0 0
chr19:58549117|58549427 hsa-miR-4787-5p 1 0 0
chr19:58549117|58549427 hsa-miR-4733-3p 0 1 0
chr19:58549117|58549427 hsa-miR-2276-3p 1 1 0
chr19:58549117|58549427 hsa-miR-7160-3p 0 1 0
chr19:58549117|58549427 hsa-miR-1296-5p 1 0 0
chr19:58549117|58549427 hsa-miR-6792-5p 1 0 0
chr19:58549117|58549427 hsa-miR-584-5p 0 1 0
chr19:58549117|58549427 hsa-miR-5002-5p 0 1 0
chr19:58549117|58549427 hsa-miR-4763-3p 1 0 0
chr19:58549117|58549427 hsa-miR-6865-5p 1 0 0
chr19:58549117|58549427 hsa-miR-6743-5p 1 0 0
chr19:58549117|58549427 hsa-miR-6752-5p 1 1 0
chr19:58549117|58549427 hsa-miR-6756-5p 1 1 0
chr19:58549117|58549427 hsa-miR-6803-5p 1 0 0
chr19:58549117|58549427 hsa-miR-6813-5p 0 1 0
chr19:58549117|58549427 hsa-miR-6851-5p 1 0 0
chr19:58549117|58549427 hsa-miR-6722-3p 1 0 0
chr19:58549117|58549427 hsa-miR-6751-5p 1 0 0
chr19:58549117|58549427 hsa-miR-6779-5p 1 0 0
chr19:58549117|58549427 hsa-miR-7111-5p 1 0 0
chr19:58549117|58549427 hsa-miR-4728-5p 1 0 0
chr19:58549117|58549427 hsa-miR-6780b-5p 1 0 0
chr19:58549117|58549427 hsa-miR-6836-5p 1 0 0
chr19:58549117|58549427 hsa-miR-328-5p 1 0 0
chr19:58549117|58549427 hsa-miR-4726-5p 1 0 0
chr19:58549117|58549427 hsa-miR-6738-5p 1 0 0
chr19:58549117|58549427 hsa-miR-6858-5p 1 0 0
chr19:58549117|58549427 hsa-miR-6511b-5p 0 1 0
chr19:58549117|58549427 hsa-miR-3085-5p 1 0 0
chr19:58549117|58549427 hsa-miR-1914-3p 0 1 0
chr19:58549117|58549427 hsa-miR-6766-5p 0 1 0
chr19:58549117|58549427 hsa-miR-3184-5p 1 1 0
chr19:58549117|58549427 hsa-miR-6819-3p 0 1 0
chr19:58549117|58549427 hsa-miR-10394-5p 0 1 0
chr19:58549117|58549427 hsa-miR-6848-3p 0 1 0
chr19:58549117|58549427 hsa-miR-6827-3p 0 1 0
chr19:58549117|58549427 hsa-miR-6504-5p 0 1 0
chr19:58549117|58549427 hsa-miR-3913-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr19:58549117|58549427
ORF Type ORF1
Protein Length 34
Nucleotide Length 105
Protein Sequence MKPVVQVWTLLNTPHHHLAGGGDGGCHWSPSYCH
Nucleotide Sequence ATGAAGCCTGTAGTCCAGGTCTGGACCCTGTTGAACACCCCTCATCACCACCTTGCAGGAGGAGGAGACGGAGGCTGCCATTGGAGCCCCTCCTACTGCCACTGA

CircID chr19:58549117|58549427
ORF Type ORF2
Protein Length 34
Nucleotide Length 102
Protein Sequence MQEEETEAAIGAPPTATEGPETKPVLMALAEGPG
Nucleotide Sequence TTGCAGGAGGAGGAGACGGAGGCTGCCATTGGAGCCCCTCCTACTGCCACTGAGGGCCCTGAGACCAAACCTGTGCTTATGGCTCTTGCGGAGGGTCCTGGT

CircID chr19:58549117|58549427
ORF Type ORF3
Protein Length 41
Nucleotide Length 126
Protein Sequence LRTTTLLLLNVALPLQLPASQGLRLQEPLVPHPWLAWPLSR
Nucleotide Sequence CTGAGGACTACAACCTTATTGTTATTGAACGTGGCGCTGCCGCTGCAGCTACCGGCCAGCCAGGGACTGCGCCTGCAGGAACCCCTGGTGCCCCACCCCTGGCTGGCATGGCCATTGTCAAGGTAA

CircID chr19:58549117|58549427
ORF Type ORF4
Protein Length 45
Nucleotide Length 135
Protein Sequence MDPVEHPSSPPCRRRRRRLPLEPLLLPLRALRPNLCLWLLRRVLV
Nucleotide Sequence CTGGACCCTGTTGAACACCCCTCATCACCACCTTGCAGGAGGAGGAGACGGAGGCTGCCATTGGAGCCCCTCCTACTGCCACTGAGGGCCCTGAGACCAAACCTGTGCTTATGGCTCTTGCGGAGGGTCCTGGTG

CircID chr19:58549117|58549427
ORF Type ORF5
Protein Length 71
Nucleotide Length 213
Protein Sequence MQGGDEGCSTGSRPGLQASSYSYSSLGQAYLDNGHASQGWGTRGSCRRSPWLAGSCSGSATFNNNKVVVLS
Nucleotide Sequence CTGCAAGGTGGTGATGAGGGGTGTTCAACAGGGTCCAGACCTGGACTACAGGCTTCATCCTACAGCTATAGTTCCTTGGGACAGGCTTACCTTGACAATGGCCATGCCAGCCAGGGGTGGGGCACCAGGGGTTCCTGCAGGCGCAGTCCCTGGCTGGCCGGTAGCTGCAGCGGCAGCGCCACGTTCAATAACAATAAGGTTGTAGTCCTCAGT

CircID chr19:58549117|58549427
ORF Type ORF6
Protein Length 88
Nucleotide Length 267
Protein Sequence MVSGPSVAVGGAPMAASVSSSCKVVMRGVQQGPDLDYRLHPTAIVPWDRLTLTMAMPARGGAPGVPAGAVPGWPVAAAAAPRSITIRL
Nucleotide Sequence TTGGTCTCAGGGCCCTCAGTGGCAGTAGGAGGGGCTCCAATGGCAGCCTCCGTCTCCTCCTCCTGCAAGGTGGTGATGAGGGGTGTTCAACAGGGTCCAGACCTGGACTACAGGCTTCATCCTACAGCTATAGTTCCTTGGGACAGGCTTACCTTGACAATGGCCATGCCAGCCAGGGGTGGGGCACCAGGGGTTCCTGCAGGCGCAGTCCCTGGCTGGCCGGTAGCTGCAGCGGCAGCGCCACGTTCAATAACAATAAGGTTGTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites