CircNet

General Information

circRNA Basic Information

CircID	chr19:5894821\|5894956
Strand	-
CircType	exon
Host Gene	ENSG00000174886.11;
Algorism	CIRI2;
Sequence	ACGCAGGCGGCGGCGCCAATCCCGTAGTTGTGCGCTGTGGGAGTGGGGAGGTGATGTCAGGCCCGGGTGGGGCTCGGCCGGACCAAGACGCTCCACGCCCTGGCCGGTGCCCACCCTGGGAGCCAGACTGAGACCC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr19:5894821\|5894956	hsa-miR-149-5p	0	0	1
chr19:5894821\|5894956	hsa-miR-149-3p	0	0	1
chr19:5894821\|5894956	hsa-miR-133b	0	0	1
chr19:5894821\|5894956	hsa-miR-489-5p	0	0	1
chr19:5894821\|5894956	hsa-miR-489-3p	0	0	1
chr19:5894821\|5894956	hsa-miR-622	0	1	1
chr19:5894821\|5894956	hsa-miR-541-5p	0	0	1
chr19:5894821\|5894956	hsa-miR-541-3p	0	0	1
chr19:5894821\|5894956	hsa-miR-1225-3p	0	0	1
chr19:5894821\|5894956	hsa-miR-615-3p	0	0	1
chr19:5894821\|5894956	hsa-miR-532-3p	0	1	1
chr19:5894821\|5894956	hsa-miR-654-5p	0	0	1
chr19:5894821\|5894956	hsa-miR-566	0	0	1
chr19:5894821\|5894956	hsa-miR-188-3p	0	1	1
chr19:5894821\|5894956	hsa-miR-1268	0	0	1
chr19:5894821\|5894956	hsa-miR-133a	0	0	1
chr19:5894821\|5894956	hsa-miR-499-3p	0	0	1
chr19:5894821\|5894956	hsa-miR-612	1	0	0
chr19:5894821\|5894956	hsa-miR-4286	0	1	0
chr19:5894821\|5894956	hsa-miR-9899	1	0	0
chr19:5894821\|5894956	hsa-miR-6892-3p	1	0	0
chr19:5894821\|5894956	hsa-miR-6732-5p	1	0	0
chr19:5894821\|5894956	hsa-miR-6884-3p	1	1	0
chr19:5894821\|5894956	hsa-miR-939-3p	1	0	0
chr19:5894821\|5894956	hsa-miR-6749-5p	0	1	0
chr19:5894821\|5894956	hsa-miR-6821-3p	1	0	0
chr19:5894821\|5894956	hsa-miR-1306-5p	0	1	0
chr19:5894821\|5894956	hsa-miR-6719-3p	0	1	0
chr19:5894821\|5894956	hsa-miR-4758-3p	1	1	0
chr19:5894821\|5894956	hsa-miR-4433a-5p	1	0	0
chr19:5894821\|5894956	hsa-miR-6850-3p	0	1	0
chr19:5894821\|5894956	hsa-miR-3913-3p	0	1	0
chr19:5894821\|5894956	hsa-miR-6775-5p	1	0	0
chr19:5894821\|5894956	hsa-miR-6756-5p	0	1	0
chr19:5894821\|5894956	hsa-miR-4685-5p	1	1	0
chr19:5894821\|5894956	hsa-miR-6729-5p	1	0	0
chr19:5894821\|5894956	hsa-miR-324-3p	1	0	0
chr19:5894821\|5894956	hsa-miR-4722-3p	0	1	0
chr19:5894821\|5894956	hsa-miR-6511b-3p	1	0	0
chr19:5894821\|5894956	hsa-miR-1234-3p	1	0	0
chr19:5894821\|5894956	hsa-miR-6764-5p	0	1	0
chr19:5894821\|5894956	hsa-miR-4769-3p	1	0	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr19:5894821\|5894956
ORF Type	ORF1
Protein Length	34
Nucleotide Length	102
Protein Sequence	MWEWGGDVRPGWGSAGPRRSTPWPVPTLGARLRP
Nucleotide Sequence	CTGTGGGAGTGGGGAGGTGATGTCAGGCCCGGGTGGGGCTCGGCCGGACCAAGACGCTCCACGCCCTGGCCGGTGCCCACCCTGGGAGCCAGACTGAGACCC

CircID	chr19:5894821\|5894956
ORF Type	ORF2
Protein Length	25
Nucleotide Length	78
Protein Sequence	MSGPGGARPDQDAPRPGRCPPWEPD
Nucleotide Sequence	ATGTCAGGCCCGGGTGGGGCTCGGCCGGACCAAGACGCTCCACGCCCTGGCCGGTGCCCACCCTGGGAGCCAGACTGA

CircID	chr19:5894821\|5894956
ORF Type	ORF3
Protein Length	42
Nucleotide Length	126
Protein Sequence	MAPRVGTGQGVERLGPAEPHPGLTSPPHSHSAQLRDWRRRLR
Nucleotide Sequence	CTGGCTCCCAGGGTGGGCACCGGCCAGGGCGTGGAGCGTCTTGGTCCGGCCGAGCCCCACCCGGGCCTGACATCACCTCCCCACTCCCACAGCGCACAACTACGGGATTGGCGCCGCCGCCTGCGT

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information