CircRNA Information

General Information
circRNA Basic Information
CircID chr19:6678196|6678445
Strand +
CircType exon
Host Gene ENSG00000125730.15;
Algorism CIRI2;
Sequence CCGACTGGTCAAGGTTCAGCTGTCCAATGACTTTGACGAGTACATCATGGCCATTGAGCAGACCATCAAGTCAGGTCAGGCTCAGCACGCTGCCTCCCGTGGCTCTTCCCTGGCTTCCTCCCCACGACTCAGCTTCTTCCCTCTCCCCTCCACTCCAGGCTCGGATGAGGTGCAGGTTGGACAGCAGCGCACGTTCATCAGCCCCATCAAGTGCAGAGAAGCCCTGAAGCTGGAGGAGAAGAAACACTAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:6678196|6678445 hsa-miR-122-5p 0 0 1
chr19:6678196|6678445 hsa-miR-122-3p 0 0 1
chr19:6678196|6678445 hsa-miR-520g-5p 0 0 1
chr19:6678196|6678445 hsa-miR-520g-3p 0 0 1
chr19:6678196|6678445 hsa-miR-520h 0 0 1
chr19:6678196|6678445 hsa-miR-616-5p 0 0 1
chr19:6678196|6678445 hsa-miR-616-3p 0 0 1
chr19:6678196|6678445 hsa-miR-626 0 0 1
chr19:6678196|6678445 hsa-miR-631 0 0 1
chr19:6678196|6678445 hsa-miR-650 0 1 1
chr19:6678196|6678445 hsa-miR-766-5p 0 0 1
chr19:6678196|6678445 hsa-miR-766-3p 0 0 1
chr19:6678196|6678445 hsa-miR-939-5p 0 0 1
chr19:6678196|6678445 hsa-miR-939-3p 0 0 1
chr19:6678196|6678445 hsa-miR-942-5p 0 0 1
chr19:6678196|6678445 hsa-miR-942-3p 0 0 1
chr19:6678196|6678445 hsa-miR-1827 0 0 1
chr19:6678196|6678445 hsa-miR-671-5p 1 1 1
chr19:6678196|6678445 hsa-miR-491-5p 0 0 1
chr19:6678196|6678445 hsa-miR-615-3p 0 1 1
chr19:6678196|6678445 hsa-miR-885-3p 0 1 1
chr19:6678196|6678445 hsa-miR-767-3p 0 1 1
chr19:6678196|6678445 hsa-miR-142-3p 0 1 1
chr19:6678196|6678445 hsa-miR-1254 0 0 1
chr19:6678196|6678445 hsa-miR-608 1 0 0
chr19:6678196|6678445 hsa-miR-658 1 0 0
chr19:6678196|6678445 hsa-miR-762 1 0 0
chr19:6678196|6678445 hsa-miR-1268a 1 0 0
chr19:6678196|6678445 hsa-miR-1275 1 0 0
chr19:6678196|6678445 hsa-miR-2110 1 0 0
chr19:6678196|6678445 hsa-miR-2861 1 0 0
chr19:6678196|6678445 hsa-miR-3125 1 0 0
chr19:6678196|6678445 hsa-miR-3132 1 0 0
chr19:6678196|6678445 hsa-miR-3175 1 1 0
chr19:6678196|6678445 hsa-miR-3185 0 1 0
chr19:6678196|6678445 hsa-miR-4270 1 0 0
chr19:6678196|6678445 hsa-miR-4271 1 0 0
chr19:6678196|6678445 hsa-miR-4279 0 1 0
chr19:6678196|6678445 hsa-miR-3652 1 0 0
chr19:6678196|6678445 hsa-miR-1268b 1 0 0
chr19:6678196|6678445 hsa-miR-4430 1 0 0
chr19:6678196|6678445 hsa-miR-4440 1 1 0
chr19:6678196|6678445 hsa-miR-4492 1 0 0
chr19:6678196|6678445 hsa-miR-4498 1 0 0
chr19:6678196|6678445 hsa-miR-4502 0 1 0
chr19:6678196|6678445 hsa-miR-4508 1 0 0
chr19:6678196|6678445 hsa-miR-1587 1 0 0
chr19:6678196|6678445 hsa-miR-4651 1 0 0
chr19:6678196|6678445 hsa-miR-4656 1 0 0
chr19:6678196|6678445 hsa-miR-4663 0 1 0
chr19:6678196|6678445 hsa-miR-4706 1 0 0
chr19:6678196|6678445 hsa-miR-4739 1 1 0
chr19:6678196|6678445 hsa-miR-5194 1 0 0
chr19:6678196|6678445 hsa-miR-5698 1 0 0
chr19:6678196|6678445 hsa-miR-5787 1 0 0
chr19:6678196|6678445 hsa-miR-6077 0 1 0
chr19:6678196|6678445 hsa-miR-6090 1 0 0
chr19:6678196|6678445 hsa-miR-6124 1 0 0
chr19:6678196|6678445 hsa-miR-6127 1 0 0
chr19:6678196|6678445 hsa-miR-6133 1 1 0
chr19:6678196|6678445 hsa-miR-8072 1 0 0
chr19:6678196|6678445 hsa-miR-8077 0 1 0
chr19:6678196|6678445 hsa-miR-8085 1 1 0
chr19:6678196|6678445 hsa-miR-12114 1 0 0
chr19:6678196|6678445 hsa-miR-12115 1 1 0
chr19:6678196|6678445 hsa-miR-12129 0 1 0
chr19:6678196|6678445 hsa-miR-4433b-3p 1 0 0
chr19:6678196|6678445 hsa-miR-6734-5p 1 0 0
chr19:6678196|6678445 hsa-miR-504-3p 1 0 0
chr19:6678196|6678445 hsa-miR-4433a-3p 1 0 0
chr19:6678196|6678445 hsa-miR-3150a-3p 1 0 0
chr19:6678196|6678445 hsa-miR-7106-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6825-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6894-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6857-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6728-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6515-5p 1 1 0
chr19:6678196|6678445 hsa-miR-6807-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6880-5p 1 1 0
chr19:6678196|6678445 hsa-miR-7847-3p 1 1 0
chr19:6678196|6678445 hsa-miR-4695-5p 1 1 0
chr19:6678196|6678445 hsa-miR-6746-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6727-5p 1 0 0
chr19:6678196|6678445 hsa-miR-3622b-5p 1 0 0
chr19:6678196|6678445 hsa-miR-3187-3p 0 1 0
chr19:6678196|6678445 hsa-miR-197-5p 1 0 0
chr19:6678196|6678445 hsa-miR-433-3p 0 1 0
chr19:6678196|6678445 hsa-miR-3663-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6742-5p 1 0 0
chr19:6678196|6678445 hsa-miR-3151-5p 1 0 0
chr19:6678196|6678445 hsa-miR-3180-3p 1 0 0
chr19:6678196|6678445 hsa-miR-6748-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6772-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6796-5p 1 0 0
chr19:6678196|6678445 hsa-miR-185-3p 1 0 0
chr19:6678196|6678445 hsa-miR-6827-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6798-5p 1 0 0
chr19:6678196|6678445 hsa-miR-3126-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6760-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6782-5p 1 0 0
chr19:6678196|6678445 hsa-miR-4793-3p 0 1 0
chr19:6678196|6678445 hsa-miR-6810-5p 1 0 0
chr19:6678196|6678445 hsa-miR-5006-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6815-3p 0 1 0
chr19:6678196|6678445 hsa-miR-6786-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6835-5p 1 0 0
chr19:6678196|6678445 hsa-miR-7109-5p 1 0 0
chr19:6678196|6678445 hsa-miR-3944-3p 1 0 0
chr19:6678196|6678445 hsa-miR-1229-5p 1 0 0
chr19:6678196|6678445 hsa-miR-4640-5p 1 0 0
chr19:6678196|6678445 hsa-miR-3127-5p 0 1 0
chr19:6678196|6678445 hsa-miR-6771-5p 1 0 0
chr19:6678196|6678445 hsa-miR-92b-5p 1 0 0
chr19:6678196|6678445 hsa-miR-3677-3p 1 0 0
chr19:6678196|6678445 hsa-miR-6749-5p 1 1 0
chr19:6678196|6678445 hsa-miR-149-3p 1 0 0
chr19:6678196|6678445 hsa-miR-6824-5p 1 0 0
chr19:6678196|6678445 hsa-miR-3925-3p 0 1 0
chr19:6678196|6678445 hsa-miR-6878-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6869-5p 1 0 0
chr19:6678196|6678445 hsa-miR-423-5p 1 0 0
chr19:6678196|6678445 hsa-miR-3158-3p 0 1 0
chr19:6678196|6678445 hsa-miR-7852-3p 0 1 0
chr19:6678196|6678445 hsa-miR-10400-5p 1 0 0
chr19:6678196|6678445 hsa-miR-1207-5p 1 0 0
chr19:6678196|6678445 hsa-miR-1233-5p 1 0 0
chr19:6678196|6678445 hsa-miR-4763-3p 1 0 0
chr19:6678196|6678445 hsa-miR-6778-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6787-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6812-5p 1 1 0
chr19:6678196|6678445 hsa-miR-6870-5p 1 0 0
chr19:6678196|6678445 hsa-miR-1343-5p 1 0 0
chr19:6678196|6678445 hsa-miR-5001-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6737-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6754-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6756-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6803-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6819-5p 1 1 0
chr19:6678196|6678445 hsa-miR-6851-5p 1 0 0
chr19:6678196|6678445 hsa-miR-7107-5p 1 0 0
chr19:6678196|6678445 hsa-miR-1249-5p 1 1 0
chr19:6678196|6678445 hsa-miR-6751-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6763-5p 1 1 0
chr19:6678196|6678445 hsa-miR-6779-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6780a-5p 1 1 0
chr19:6678196|6678445 hsa-miR-6797-5p 1 1 0
chr19:6678196|6678445 hsa-miR-6875-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6879-5p 1 0 0
chr19:6678196|6678445 hsa-miR-7111-5p 1 1 0
chr19:6678196|6678445 hsa-miR-320a-5p 0 1 0
chr19:6678196|6678445 hsa-miR-3620-5p 1 0 0
chr19:6678196|6678445 hsa-miR-4728-5p 1 1 0
chr19:6678196|6678445 hsa-miR-5196-5p 1 1 0
chr19:6678196|6678445 hsa-miR-6780b-5p 1 0 0
chr19:6678196|6678445 hsa-miR-1237-5p 1 0 0
chr19:6678196|6678445 hsa-miR-328-5p 1 0 0
chr19:6678196|6678445 hsa-miR-4649-5p 1 0 0
chr19:6678196|6678445 hsa-miR-4685-5p 1 0 0
chr19:6678196|6678445 hsa-miR-4725-3p 1 0 0
chr19:6678196|6678445 hsa-miR-4745-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6729-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6735-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6738-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6794-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6795-5p 1 1 0
chr19:6678196|6678445 hsa-miR-6858-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6883-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6887-5p 1 1 0
chr19:6678196|6678445 hsa-miR-34b-5p 0 1 0
chr19:6678196|6678445 hsa-miR-3198 1 0 0
chr19:6678196|6678445 hsa-miR-7843-5p 1 0 0
chr19:6678196|6678445 hsa-miR-4747-5p 1 1 0
chr19:6678196|6678445 hsa-miR-6750-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6849-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6791-5p 1 0 0
chr19:6678196|6678445 hsa-miR-6884-5p 1 0 0
chr19:6678196|6678445 hsa-miR-4691-5p 0 1 0
chr19:6678196|6678445 hsa-miR-10397-5p 0 1 0
chr19:6678196|6678445 hsa-miR-135a-2-3p 1 0 0
chr19:6678196|6678445 hsa-miR-3922-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr19:6678196|6678445
ORF Type ORF1
Protein Length 82
Nucleotide Length 246
Protein Sequence MVKVQLSNDFDEYIMAIEQTIKSGQAQHAASRGSSLASSPRLSFFPLPSTPGSDEVQVGQQRTFISPIKCREALKLEEKKHY
Nucleotide Sequence CTGGTCAAGGTTCAGCTGTCCAATGACTTTGACGAGTACATCATGGCCATTGAGCAGACCATCAAGTCAGGTCAGGCTCAGCACGCTGCCTCCCGTGGCTCTTCCCTGGCTTCCTCCCCACGACTCAGCTTCTTCCCTCTCCCCTCCACTCCAGGCTCGGATGAGGTGCAGGTTGGACAGCAGCGCACGTTCATCAGCCCCATCAAGTGCAGAGAAGCCCTGAAGCTGGAGGAGAAGAAACACTAC
CircID chr19:6678196|6678445
ORF Type ORF2
Protein Length 66
Nucleotide Length 201
Protein Sequence MTLTSTSWPLSRPSSQVRLSTLPPVALPWLPPHDSASSLSPPLQARMRCRLDSSARSSAPSSAEKP
Nucleotide Sequence ATGACTTTGACGAGTACATCATGGCCATTGAGCAGACCATCAAGTCAGGTCAGGCTCAGCACGCTGCCTCCCGTGGCTCTTCCCTGGCTTCCTCCCCACGACTCAGCTTCTTCCCTCTCCCCTCCACTCCAGGCTCGGATGAGGTGCAGGTTGGACAGCAGCGCACGTTCATCAGCCCCATCAAGTGCAGAGAAGCCCTGA
CircID chr19:6678196|6678445
ORF Type ORF3
Protein Length 38
Nucleotide Length 117
Protein Sequence MLSNLHLIRAWSGGEREEAESWGGSQGRATGGSVLSLT
Nucleotide Sequence CTGCTGTCCAACCTGCACCTCATCCGAGCCTGGAGTGGAGGGGAGAGGGAAGAAGCTGAGTCGTGGGGAGGAAGCCAGGGAAGAGCCACGGGAGGCAGCGTGCTGAGCCTGACCTGA
CircID chr19:6678196|6678445
ORF Type ORF4
Protein Length 44
Nucleotide Length 135
Protein Sequence MHLMGLMNVRCCPTCTSSEPGVEGRGKKLSRGEEAREEPREAAC
Nucleotide Sequence CTGCACTTGATGGGGCTGATGAACGTGCGCTGCTGTCCAACCTGCACCTCATCCGAGCCTGGAGTGGAGGGGAGAGGGAAGAAGCTGAGTCGTGGGGAGGAAGCCAGGGAAGAGCCACGGGAGGCAGCGTGCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab