CircRNA Information

General Information
circRNA Basic Information
CircID chr19:6733637|6734039
Strand -
CircType exon
Host Gene ENSG00000125734.12;
Algorism CIRI2;
Sequence TGGCCTTCTTCCGCCTGAGAGCCGATCACCACGTGGAAACTGAAGTTGTAGGAGTTGTTGAGGTGGCTCAGGCCCAACACCAGGTCCTTGTCCTTCCCACTAGGACCCTGAAGGGACAGAGCCCCTCCATCAGCTGGTTCTGGGTCCCCGCAGGGCCCTGGGGTGTGCATCTTCCCTCCTGCCCCGCCTCCCCGAAACCTGAATCACTGCGGGTGTTGACTTGGGCTTGCTGG
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:6733637|6734039 hsa-miR-492 0 0 1
chr19:6733637|6734039 hsa-miR-505-5p 0 0 1
chr19:6733637|6734039 hsa-miR-505-3p 0 0 1
chr19:6733637|6734039 hsa-miR-631 0 0 1
chr19:6733637|6734039 hsa-miR-744-5p 0 0 1
chr19:6733637|6734039 hsa-miR-744-3p 0 0 1
chr19:6733637|6734039 hsa-miR-760 0 1 1
chr19:6733637|6734039 hsa-miR-1291 0 1 1
chr19:6733637|6734039 hsa-miR-1266-5p 0 0 1
chr19:6733637|6734039 hsa-miR-1266-3p 0 0 1
chr19:6733637|6734039 hsa-miR-486-3p 0 0 1
chr19:6733637|6734039 hsa-miR-542-5p 0 0 1
chr19:6733637|6734039 hsa-miR-423-5p 1 0 1
chr19:6733637|6734039 hsa-miR-663 0 0 1
chr19:6733637|6734039 hsa-miR-612 1 0 0
chr19:6733637|6734039 hsa-miR-663a 1 1 0
chr19:6733637|6734039 hsa-miR-762 1 0 0
chr19:6733637|6734039 hsa-miR-940 1 0 0
chr19:6733637|6734039 hsa-miR-1182 1 1 0
chr19:6733637|6734039 hsa-miR-1268a 1 0 0
chr19:6733637|6734039 hsa-miR-711 0 1 0
chr19:6733637|6734039 hsa-miR-2861 0 1 0
chr19:6733637|6734039 hsa-miR-3131 1 1 0
chr19:6733637|6734039 hsa-miR-3141 1 0 0
chr19:6733637|6734039 hsa-miR-3147 1 0 0
chr19:6733637|6734039 hsa-miR-3185 0 1 0
chr19:6733637|6734039 hsa-miR-3196 1 0 0
chr19:6733637|6734039 hsa-miR-4298 1 0 0
chr19:6733637|6734039 hsa-miR-4260 1 0 0
chr19:6733637|6734039 hsa-miR-3918 0 1 0
chr19:6733637|6734039 hsa-miR-1268b 1 0 0
chr19:6733637|6734039 hsa-miR-4466 1 0 0
chr19:6733637|6734039 hsa-miR-4488 1 0 0
chr19:6733637|6734039 hsa-miR-4492 1 0 0
chr19:6733637|6734039 hsa-miR-4505 1 0 0
chr19:6733637|6734039 hsa-miR-4508 1 0 0
chr19:6733637|6734039 hsa-miR-4688 1 0 0
chr19:6733637|6734039 hsa-miR-4706 1 1 0
chr19:6733637|6734039 hsa-miR-4739 1 1 0
chr19:6733637|6734039 hsa-miR-4779 0 1 0
chr19:6733637|6734039 hsa-miR-5090 1 0 0
chr19:6733637|6734039 hsa-miR-5572 1 0 0
chr19:6733637|6734039 hsa-miR-5705 1 1 0
chr19:6733637|6734039 hsa-miR-6860 1 0 0
chr19:6733637|6734039 hsa-miR-8062 0 1 0
chr19:6733637|6734039 hsa-miR-8072 1 0 0
chr19:6733637|6734039 hsa-miR-8075 0 1 0
chr19:6733637|6734039 hsa-miR-8080 0 1 0
chr19:6733637|6734039 hsa-miR-8089 1 0 0
chr19:6733637|6734039 hsa-miR-9500 0 1 0
chr19:6733637|6734039 hsa-miR-1843 0 1 0
chr19:6733637|6734039 hsa-miR-6765-5p 1 1 0
chr19:6733637|6734039 hsa-miR-6861-5p 1 0 0
chr19:6733637|6734039 hsa-miR-7106-5p 1 0 0
chr19:6733637|6734039 hsa-miR-6825-5p 1 1 0
chr19:6733637|6734039 hsa-miR-224-5p 0 1 0
chr19:6733637|6734039 hsa-miR-6799-5p 1 0 0
chr19:6733637|6734039 hsa-miR-6089 1 0 0
chr19:6733637|6734039 hsa-miR-4722-5p 1 1 0
chr19:6733637|6734039 hsa-miR-6727-5p 1 0 0
chr19:6733637|6734039 hsa-miR-6721-5p 1 1 0
chr19:6733637|6734039 hsa-miR-3151-5p 1 0 0
chr19:6733637|6734039 hsa-miR-659-3p 1 0 0
chr19:6733637|6734039 hsa-miR-3180-3p 1 0 0
chr19:6733637|6734039 hsa-miR-6796-5p 1 0 0
chr19:6733637|6734039 hsa-miR-6810-5p 1 0 0
chr19:6733637|6734039 hsa-miR-3691-3p 0 1 0
chr19:6733637|6734039 hsa-miR-6786-5p 1 0 0
chr19:6733637|6734039 hsa-miR-7109-5p 1 0 0
chr19:6733637|6734039 hsa-miR-1229-5p 1 0 0
chr19:6733637|6734039 hsa-miR-4640-5p 1 0 0
chr19:6733637|6734039 hsa-miR-1908-5p 1 0 0
chr19:6733637|6734039 hsa-miR-1228-5p 1 0 0
chr19:6733637|6734039 hsa-miR-6771-5p 1 0 0
chr19:6733637|6734039 hsa-miR-4713-3p 1 0 0
chr19:6733637|6734039 hsa-miR-6749-5p 1 0 0
chr19:6733637|6734039 hsa-miR-4743-3p 0 1 0
chr19:6733637|6734039 hsa-miR-149-3p 1 1 0
chr19:6733637|6734039 hsa-miR-6824-5p 1 0 0
chr19:6733637|6734039 hsa-miR-6781-5p 1 0 0
chr19:6733637|6734039 hsa-miR-7112-5p 1 0 0
chr19:6733637|6734039 hsa-miR-7160-3p 0 1 0
chr19:6733637|6734039 hsa-miR-4727-3p 0 1 0
chr19:6733637|6734039 hsa-miR-6741-3p 0 1 0
chr19:6733637|6734039 hsa-miR-10400-5p 1 0 0
chr19:6733637|6734039 hsa-miR-4763-3p 1 1 0
chr19:6733637|6734039 hsa-miR-6787-5p 1 1 0
chr19:6733637|6734039 hsa-miR-6816-5p 1 1 0
chr19:6733637|6734039 hsa-miR-6775-5p 1 1 0
chr19:6733637|6734039 hsa-miR-1343-5p 1 0 0
chr19:6733637|6734039 hsa-miR-5001-5p 1 0 0
chr19:6733637|6734039 hsa-miR-6726-5p 1 0 0
chr19:6733637|6734039 hsa-miR-6743-5p 1 0 0
chr19:6733637|6734039 hsa-miR-6754-5p 1 0 0
chr19:6733637|6734039 hsa-miR-6813-5p 0 1 0
chr19:6733637|6734039 hsa-miR-6815-5p 1 0 0
chr19:6733637|6734039 hsa-miR-6819-5p 1 0 0
chr19:6733637|6734039 hsa-miR-6851-5p 1 0 0
chr19:6733637|6734039 hsa-miR-1249-5p 1 1 0
chr19:6733637|6734039 hsa-miR-6722-3p 1 0 0
chr19:6733637|6734039 hsa-miR-6779-5p 1 0 0
chr19:6733637|6734039 hsa-miR-6797-5p 1 1 0
chr19:6733637|6734039 hsa-miR-6808-5p 1 0 0
chr19:6733637|6734039 hsa-miR-6879-5p 1 0 0
chr19:6733637|6734039 hsa-miR-7111-5p 1 0 0
chr19:6733637|6734039 hsa-miR-1915-3p 0 1 0
chr19:6733637|6734039 hsa-miR-4728-5p 0 1 0
chr19:6733637|6734039 hsa-miR-5196-5p 1 1 0
chr19:6733637|6734039 hsa-miR-6780b-5p 1 0 0
chr19:6733637|6734039 hsa-miR-10396a-5p 1 0 0
chr19:6733637|6734039 hsa-miR-10396b-5p 1 1 0
chr19:6733637|6734039 hsa-miR-1237-5p 1 1 0
chr19:6733637|6734039 hsa-miR-1909-3p 1 0 0
chr19:6733637|6734039 hsa-miR-328-5p 1 0 0
chr19:6733637|6734039 hsa-miR-4685-5p 0 1 0
chr19:6733637|6734039 hsa-miR-4749-5p 1 1 0
chr19:6733637|6734039 hsa-miR-6738-5p 1 0 0
chr19:6733637|6734039 hsa-miR-6777-5p 1 1 0
chr19:6733637|6734039 hsa-miR-6848-5p 1 0 0
chr19:6733637|6734039 hsa-miR-6889-5p 1 1 0
chr19:6733637|6734039 hsa-miR-4436b-3p 1 0 0
chr19:6733637|6734039 hsa-miR-6885-5p 1 0 0
chr19:6733637|6734039 hsa-miR-939-5p 1 0 0
chr19:6733637|6734039 hsa-miR-4758-5p 1 0 0
chr19:6733637|6734039 hsa-miR-6799-3p 0 1 0
chr19:6733637|6734039 hsa-miR-4747-5p 1 1 0
chr19:6733637|6734039 hsa-miR-6785-5p 1 0 0
chr19:6733637|6734039 hsa-miR-3184-5p 0 1 0
chr19:6733637|6734039 hsa-miR-6837-5p 0 1 0
chr19:6733637|6734039 hsa-miR-4756-5p 1 1 0
chr19:6733637|6734039 hsa-miR-6764-5p 0 1 0
chr19:6733637|6734039 hsa-miR-1912-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr19:6733637|6734039
ORF Type ORF1
Protein Length 73
Nucleotide Length 219
Protein Sequence MRADHHVETEVVGVVEVAQAQHQVLVLPTRTLKGQSPSISWFWVPAGPWGVHLPSCPASPKPESLRVLTWACW
Nucleotide Sequence CTGAGAGCCGATCACCACGTGGAAACTGAAGTTGTAGGAGTTGTTGAGGTGGCTCAGGCCCAACACCAGGTCCTTGTCCTTCCCACTAGGACCCTGAAGGGACAGAGCCCCTCCATCAGCTGGTTCTGGGTCCCCGCAGGGCCCTGGGGTGTGCATCTTCCCTCCTGCCCCGCCTCCCCGAAACCTGAATCACTGCGGGTGTTGACTTGGGCTTGCTGG
CircID chr19:6733637|6734039
ORF Type ORF2
Protein Length 56
Nucleotide Length 168
Protein Sequence MHTPGPCGDPEPADGGALSLQGPSGKDKDLVLGLSHLNNSYNFSFHVVIGSQAEEG
Nucleotide Sequence ATGCACACCCCAGGGCCCTGCGGGGACCCAGAACCAGCTGATGGAGGGGCTCTGTCCCTTCAGGGTCCTAGTGGGAAGGACAAGGACCTGGTGTTGGGCCTGAGCCACCTCAACAACTCCTACAACTTCAGTTTCCACGTGGTGATCGGCTCTCAGGCGGAAGAAGGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab