CircRNA Information

General Information
circRNA Basic Information
CircID chr19:7543096|7543275
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CCCTGACCTGTAACCATGCCACCTGAGATCATTCCCTATGACTTCTGTGACCTCTGATCCCTGCCCTTTGACTGTAAGACCAGCACCTTCTCCCATAGAAGCAGACCTCTCTCATCCTATCATTTCCAACCTCTAACCCTTGGGTCCTGTGACCCCCACCCCCTAACCCCACCCTATGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:7543096|7543275 hsa-miR-18a-5p 0 0 1
chr19:7543096|7543275 hsa-miR-18a-3p 0 0 1
chr19:7543096|7543275 hsa-miR-383-5p 0 0 1
chr19:7543096|7543275 hsa-miR-383-3p 0 0 1
chr19:7543096|7543275 hsa-miR-18b-5p 0 0 1
chr19:7543096|7543275 hsa-miR-18b-3p 0 0 1
chr19:7543096|7543275 hsa-miR-552-5p 0 0 1
chr19:7543096|7543275 hsa-miR-552-3p 0 0 1
chr19:7543096|7543275 hsa-miR-600 0 0 1
chr19:7543096|7543275 hsa-miR-608 1 1 1
chr19:7543096|7543275 hsa-miR-877-5p 0 0 1
chr19:7543096|7543275 hsa-miR-877-3p 0 0 1
chr19:7543096|7543275 hsa-miR-1255a 0 0 1
chr19:7543096|7543275 hsa-miR-1265 0 0 1
chr19:7543096|7543275 hsa-miR-1266-5p 0 0 1
chr19:7543096|7543275 hsa-miR-1266-3p 0 0 1
chr19:7543096|7543275 hsa-miR-125a-3p 0 0 1
chr19:7543096|7543275 hsa-miR-409-5p 0 0 1
chr19:7543096|7543275 hsa-miR-513a-5p 0 0 1
chr19:7543096|7543275 hsa-miR-582-5p 0 0 1
chr19:7543096|7543275 hsa-miR-1207-5p 1 1 1
chr19:7543096|7543275 hsa-miR-1255b 0 0 1
chr19:7543096|7543275 hsa-miR-220c 0 0 1
chr19:7543096|7543275 hsa-miR-138 0 0 1
chr19:7543096|7543275 hsa-miR-422a 1 0 0
chr19:7543096|7543275 hsa-miR-632 1 0 0
chr19:7543096|7543275 hsa-miR-638 1 0 0
chr19:7543096|7543275 hsa-miR-762 1 0 0
chr19:7543096|7543275 hsa-miR-1293 1 0 0
chr19:7543096|7543275 hsa-miR-1303 1 0 0
chr19:7543096|7543275 hsa-miR-1270 1 0 0
chr19:7543096|7543275 hsa-miR-711 1 1 0
chr19:7543096|7543275 hsa-miR-3132 1 0 0
chr19:7543096|7543275 hsa-miR-3141 1 0 0
chr19:7543096|7543275 hsa-miR-3147 1 0 0
chr19:7543096|7543275 hsa-miR-378c 1 0 0
chr19:7543096|7543275 hsa-miR-4270 1 0 0
chr19:7543096|7543275 hsa-miR-3652 1 0 0
chr19:7543096|7543275 hsa-miR-3937 1 0 0
chr19:7543096|7543275 hsa-miR-1268b 1 0 0
chr19:7543096|7543275 hsa-miR-4462 1 0 0
chr19:7543096|7543275 hsa-miR-4466 1 0 0
chr19:7543096|7543275 hsa-miR-3689c 1 0 0
chr19:7543096|7543275 hsa-miR-4489 1 0 0
chr19:7543096|7543275 hsa-miR-2392 1 0 0
chr19:7543096|7543275 hsa-miR-4507 1 0 0
chr19:7543096|7543275 hsa-miR-4510 1 0 0
chr19:7543096|7543275 hsa-miR-4516 1 1 0
chr19:7543096|7543275 hsa-miR-4525 1 0 0
chr19:7543096|7543275 hsa-miR-4534 1 0 0
chr19:7543096|7543275 hsa-miR-1587 1 0 0
chr19:7543096|7543275 hsa-miR-4651 1 1 0
chr19:7543096|7543275 hsa-miR-4688 1 0 0
chr19:7543096|7543275 hsa-miR-4739 1 0 0
chr19:7543096|7543275 hsa-miR-4748 1 0 0
chr19:7543096|7543275 hsa-miR-5093 1 1 0
chr19:7543096|7543275 hsa-miR-5194 1 0 0
chr19:7543096|7543275 hsa-miR-5572 1 0 0
chr19:7543096|7543275 hsa-miR-5787 1 0 0
chr19:7543096|7543275 hsa-miR-6085 1 0 0
chr19:7543096|7543275 hsa-miR-6086 1 1 0
chr19:7543096|7543275 hsa-miR-6127 1 0 0
chr19:7543096|7543275 hsa-miR-6745 1 0 0
chr19:7543096|7543275 hsa-miR-7150 1 0 0
chr19:7543096|7543275 hsa-miR-8085 1 0 0
chr19:7543096|7543275 hsa-miR-12114 1 0 0
chr19:7543096|7543275 hsa-miR-12127 1 1 0
chr19:7543096|7543275 hsa-miR-135a-3p 1 1 0
chr19:7543096|7543275 hsa-miR-92a-1-5p 1 0 0
chr19:7543096|7543275 hsa-miR-92a-2-5p 0 1 0
chr19:7543096|7543275 hsa-miR-6734-5p 1 0 0
chr19:7543096|7543275 hsa-miR-125b-1-3p 1 0 0
chr19:7543096|7543275 hsa-miR-7106-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6894-5p 1 0 0
chr19:7543096|7543275 hsa-miR-216a-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6799-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6728-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6804-5p 1 0 0
chr19:7543096|7543275 hsa-miR-5187-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6757-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6880-5p 1 0 0
chr19:7543096|7543275 hsa-miR-4695-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6746-5p 1 1 0
chr19:7543096|7543275 hsa-miR-6890-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6741-5p 1 0 0
chr19:7543096|7543275 hsa-miR-3622b-5p 0 1 0
chr19:7543096|7543275 hsa-miR-6721-5p 1 0 0
chr19:7543096|7543275 hsa-miR-197-5p 1 0 0
chr19:7543096|7543275 hsa-miR-7845-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6742-5p 1 0 0
chr19:7543096|7543275 hsa-miR-3605-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6716-5p 1 1 0
chr19:7543096|7543275 hsa-miR-6871-5p 1 1 0
chr19:7543096|7543275 hsa-miR-3151-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6748-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6796-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6829-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6732-5p 1 1 0
chr19:7543096|7543275 hsa-miR-6827-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6770-5p 0 1 0
chr19:7543096|7543275 hsa-miR-486-3p 1 0 0
chr19:7543096|7543275 hsa-miR-6760-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6881-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6782-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6514-5p 1 0 0
chr19:7543096|7543275 hsa-miR-3934-3p 1 0 0
chr19:7543096|7543275 hsa-miR-6786-5p 1 0 0
chr19:7543096|7543275 hsa-miR-7109-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6740-5p 1 0 0
chr19:7543096|7543275 hsa-miR-1229-5p 1 0 0
chr19:7543096|7543275 hsa-miR-542-5p 1 1 0
chr19:7543096|7543275 hsa-miR-193b-5p 1 0 0
chr19:7543096|7543275 hsa-miR-4640-5p 1 0 0
chr19:7543096|7543275 hsa-miR-30c-2-3p 1 1 0
chr19:7543096|7543275 hsa-miR-1908-5p 1 0 0
chr19:7543096|7543275 hsa-miR-1228-5p 1 0 0
chr19:7543096|7543275 hsa-miR-296-3p 1 0 0
chr19:7543096|7543275 hsa-miR-6771-5p 1 0 0
chr19:7543096|7543275 hsa-miR-485-5p 1 0 0
chr19:7543096|7543275 hsa-miR-4787-5p 1 0 0
chr19:7543096|7543275 hsa-miR-149-3p 1 0 0
chr19:7543096|7543275 hsa-miR-6824-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6789-5p 1 0 0
chr19:7543096|7543275 hsa-miR-3162-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6800-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6877-5p 1 0 0
chr19:7543096|7543275 hsa-miR-4740-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6866-5p 1 0 0
chr19:7543096|7543275 hsa-miR-7112-5p 1 0 0
chr19:7543096|7543275 hsa-let-7e-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6801-5p 1 1 0
chr19:7543096|7543275 hsa-miR-6814-5p 1 1 0
chr19:7543096|7543275 hsa-miR-1273h-5p 1 0 0
chr19:7543096|7543275 hsa-miR-3689b-3p 1 0 0
chr19:7543096|7543275 hsa-miR-4763-3p 1 0 0
chr19:7543096|7543275 hsa-miR-6769b-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6778-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6787-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6812-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6816-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6865-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6726-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6737-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6743-5p 1 1 0
chr19:7543096|7543275 hsa-miR-6752-5p 1 1 0
chr19:7543096|7543275 hsa-miR-6754-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6756-5p 1 1 0
chr19:7543096|7543275 hsa-miR-6769a-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6803-5p 1 1 0
chr19:7543096|7543275 hsa-miR-6813-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6815-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6819-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6842-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6851-5p 1 0 0
chr19:7543096|7543275 hsa-miR-7110-5p 1 1 0
chr19:7543096|7543275 hsa-miR-6722-3p 1 0 0
chr19:7543096|7543275 hsa-miR-6751-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6779-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6788-5p 1 1 0
chr19:7543096|7543275 hsa-miR-6797-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6808-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6879-5p 1 1 0
chr19:7543096|7543275 hsa-miR-7111-5p 1 0 0
chr19:7543096|7543275 hsa-miR-3620-5p 1 0 0
chr19:7543096|7543275 hsa-miR-4728-5p 1 0 0
chr19:7543096|7543275 hsa-miR-5196-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6780b-5p 1 0 0
chr19:7543096|7543275 hsa-miR-10396b-5p 1 0 0
chr19:7543096|7543275 hsa-miR-1237-5p 1 0 0
chr19:7543096|7543275 hsa-miR-1909-3p 1 0 0
chr19:7543096|7543275 hsa-miR-328-5p 1 0 0
chr19:7543096|7543275 hsa-miR-4632-5p 1 0 0
chr19:7543096|7543275 hsa-miR-4649-5p 1 0 0
chr19:7543096|7543275 hsa-miR-4685-5p 1 0 0
chr19:7543096|7543275 hsa-miR-4725-3p 1 0 0
chr19:7543096|7543275 hsa-miR-4745-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6735-5p 1 1 0
chr19:7543096|7543275 hsa-miR-6794-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6846-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6848-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6858-5p 1 0 0
chr19:7543096|7543275 hsa-miR-4436b-3p 0 1 0
chr19:7543096|7543275 hsa-miR-3085-5p 1 0 0
chr19:7543096|7543275 hsa-miR-3940-5p 1 0 0
chr19:7543096|7543275 hsa-miR-30c-1-3p 1 1 0
chr19:7543096|7543275 hsa-miR-6731-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6856-5p 1 0 0
chr19:7543096|7543275 hsa-miR-1914-3p 1 0 0
chr19:7543096|7543275 hsa-miR-6736-5p 1 0 0
chr19:7543096|7543275 hsa-miR-6855-5p 1 1 0
chr19:7543096|7543275 hsa-miR-4747-5p 1 0 0
chr19:7543096|7543275 hsa-miR-378a-3p 1 0 0
chr19:7543096|7543275 hsa-miR-541-3p 1 0 0
chr19:7543096|7543275 hsa-miR-6766-5p 1 0 0
chr19:7543096|7543275 hsa-miR-3689d 0 1 0
chr19:7543096|7543275 hsa-miR-6529-5p 1 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr19:7543096|7543275
ORF Type ORF1
Protein Length 40
Nucleotide Length 120
Protein Sequence MPFDCKTSTFSHRSRPLSSYHFQPLTLGSCDPHPLTPPYV
Nucleotide Sequence CTGCCCTTTGACTGTAAGACCAGCACCTTCTCCCATAGAAGCAGACCTCTCTCATCCTATCATTTCCAACCTCTAACCCTTGGGTCCTGTGACCCCCACCCCCTAACCCCACCCTATGTC
CircID chr19:7543096|7543275
ORF Type ORF2
Protein Length 37
Nucleotide Length 114
Protein Sequence MRSFPMTSVTSDPCPLTVRPAPSPIEADLSHPIISNL
Nucleotide Sequence CTGAGATCATTCCCTATGACTTCTGTGACCTCTGATCCCTGCCCTTTGACTGTAAGACCAGCACCTTCTCCCATAGAAGCAGACCTCTCTCATCCTATCATTTCCAACCTCTAA
CircID chr19:7543096|7543275
ORF Type ORF3
Protein Length 32
Nucleotide Length 96
Protein Sequence MGEGAGLTVKGQGSEVTEVIGNDLRWHGYRSG
Nucleotide Sequence ATGGGAGAAGGTGCTGGTCTTACAGTCAAAGGGCAGGGATCAGAGGTCACAGAAGTCATAGGGAATGATCTCAGGTGGCATGGTTACAGGTCAGGG
CircID chr19:7543096|7543275
ORF Type ORF4
Protein Length 28
Nucleotide Length 87
Protein Sequence MREVCFYGRRCWSYSQRAGIRGHRSHRE
Nucleotide Sequence ATGAGAGAGGTCTGCTTCTATGGGAGAAGGTGCTGGTCTTACAGTCAAAGGGCAGGGATCAGAGGTCACAGAAGTCATAGGGAATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab