CircRNA Information

General Information
circRNA Basic Information
CircID chr19:7625880|7626171
Strand -
CircType exon
Host Gene ENSG00000076924.10;
Algorism CIRI2;
Sequence CTTCTCGAAATGGCCGCTGCGGATGTAGTAGTCGGCGAGAGAACACCAGAGCTTGCCCAGCTGGTCGGTGAAGCGGGTGAGGCCCCCGCGGATGATGGCGTCCACATTGAGGGACTGTACCTTGTCCGGATTCTGGGAGATGAGGTCGCACAGCTCGTGCCACAGCTGCAGGGCATGGGGCAGTGGGGGAGAGTCTCAGGCTCAGTCATGGAGGGGGTGGCCCTCCCACCCAGTTGCCGGCTCCCGGCAGGCCCACCTGGTAGTTGGACTTGCCGGCCTTAGACACGAAACG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:7625880|7626171 hsa-miR-187-5p 0 0 1
chr19:7625880|7626171 hsa-miR-187-3p 0 0 1
chr19:7625880|7626171 hsa-miR-150-5p 0 0 1
chr19:7625880|7626171 hsa-miR-150-3p 0 0 1
chr19:7625880|7626171 hsa-miR-412-5p 0 0 1
chr19:7625880|7626171 hsa-miR-412-3p 0 0 1
chr19:7625880|7626171 hsa-miR-564 0 0 1
chr19:7625880|7626171 hsa-miR-612 0 1 1
chr19:7625880|7626171 hsa-miR-624-5p 0 0 1
chr19:7625880|7626171 hsa-miR-624-3p 0 0 1
chr19:7625880|7626171 hsa-miR-1301-5p 0 0 1
chr19:7625880|7626171 hsa-miR-1301-3p 0 0 1
chr19:7625880|7626171 hsa-miR-874-5p 0 0 1
chr19:7625880|7626171 hsa-miR-874-3p 0 0 1
chr19:7625880|7626171 hsa-miR-541-5p 0 0 1
chr19:7625880|7626171 hsa-miR-541-3p 0 0 1
chr19:7625880|7626171 hsa-miR-1293 0 0 1
chr19:7625880|7626171 hsa-miR-532-3p 0 0 1
chr19:7625880|7626171 hsa-miR-146b-3p 0 0 1
chr19:7625880|7626171 hsa-miR-1184 0 0 1
chr19:7625880|7626171 hsa-miR-654-5p 0 0 1
chr19:7625880|7626171 hsa-miR-361-3p 0 0 1
chr19:7625880|7626171 hsa-miR-1207-3p 0 0 1
chr19:7625880|7626171 hsa-miR-324-3p 1 1 1
chr19:7625880|7626171 hsa-miR-1285 0 0 1
chr19:7625880|7626171 hsa-miR-661 0 1 0
chr19:7625880|7626171 hsa-miR-1913 0 1 0
chr19:7625880|7626171 hsa-miR-2117 0 1 0
chr19:7625880|7626171 hsa-miR-2861 0 1 0
chr19:7625880|7626171 hsa-miR-4324 0 1 0
chr19:7625880|7626171 hsa-miR-4273 0 1 0
chr19:7625880|7626171 hsa-miR-4285 1 1 0
chr19:7625880|7626171 hsa-miR-4439 0 1 0
chr19:7625880|7626171 hsa-miR-4442 0 1 0
chr19:7625880|7626171 hsa-miR-4512 1 1 0
chr19:7625880|7626171 hsa-miR-4657 0 1 0
chr19:7625880|7626171 hsa-miR-4686 1 0 0
chr19:7625880|7626171 hsa-miR-5047 0 1 0
chr19:7625880|7626171 hsa-miR-6072 0 1 0
chr19:7625880|7626171 hsa-miR-6860 1 1 0
chr19:7625880|7626171 hsa-miR-8078 0 1 0
chr19:7625880|7626171 hsa-miR-9899 1 0 0
chr19:7625880|7626171 hsa-miR-6879-3p 1 1 0
chr19:7625880|7626171 hsa-miR-6765-5p 1 0 0
chr19:7625880|7626171 hsa-miR-6089 1 0 0
chr19:7625880|7626171 hsa-miR-3189-5p 1 1 0
chr19:7625880|7626171 hsa-miR-5589-5p 1 0 0
chr19:7625880|7626171 hsa-miR-7110-3p 1 1 0
chr19:7625880|7626171 hsa-miR-6845-3p 0 1 0
chr19:7625880|7626171 hsa-miR-7108-5p 1 0 0
chr19:7625880|7626171 hsa-miR-122-3p 0 1 0
chr19:7625880|7626171 hsa-miR-6735-3p 1 0 0
chr19:7625880|7626171 hsa-miR-6788-3p 1 0 0
chr19:7625880|7626171 hsa-miR-615-3p 1 0 0
chr19:7625880|7626171 hsa-miR-3191-5p 1 0 0
chr19:7625880|7626171 hsa-miR-4640-3p 0 1 0
chr19:7625880|7626171 hsa-miR-6887-3p 1 0 0
chr19:7625880|7626171 hsa-miR-6872-3p 0 1 0
chr19:7625880|7626171 hsa-miR-4632-3p 1 0 0
chr19:7625880|7626171 hsa-miR-6865-3p 1 0 0
chr19:7625880|7626171 hsa-miR-4749-3p 1 0 0
chr19:7625880|7626171 hsa-miR-4649-3p 0 1 0
chr19:7625880|7626171 hsa-miR-6857-3p 1 1 0
chr19:7625880|7626171 hsa-miR-6890-3p 1 1 0
chr19:7625880|7626171 hsa-miR-1233-5p 0 1 0
chr19:7625880|7626171 hsa-miR-4763-3p 1 0 0
chr19:7625880|7626171 hsa-miR-6756-5p 0 1 0
chr19:7625880|7626171 hsa-miR-6754-3p 0 1 0
chr19:7625880|7626171 hsa-miR-10392-5p 1 1 0
chr19:7625880|7626171 hsa-miR-4649-5p 1 1 0
chr19:7625880|7626171 hsa-miR-3187-5p 0 1 0
chr19:7625880|7626171 hsa-miR-6799-3p 0 1 0
chr19:7625880|7626171 hsa-miR-6766-5p 0 1 0
chr19:7625880|7626171 hsa-miR-6791-5p 1 0 0
chr19:7625880|7626171 hsa-miR-6756-3p 1 0 0
chr19:7625880|7626171 hsa-miR-6784-3p 0 1 0
chr19:7625880|7626171 hsa-miR-6792-3p 1 1 0
chr19:7625880|7626171 hsa-miR-6862-3p 0 1 0
chr19:7625880|7626171 hsa-miR-6751-3p 1 1 0
chr19:7625880|7626171 hsa-miR-6891-3p 0 1 0
chr19:7625880|7626171 hsa-miR-4691-5p 0 1 0
chr19:7625880|7626171 hsa-miR-6824-3p 0 1 0
chr19:7625880|7626171 hsa-miR-7156-5p 0 1 0
chr19:7625880|7626171 hsa-miR-6874-3p 0 1 0
chr19:7625880|7626171 hsa-miR-6864-3p 0 1 0
chr19:7625880|7626171 hsa-miR-6764-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr19:7625880|7626171
ORF Type ORF1
Protein Length 90
Nucleotide Length 273
Protein Sequence MAAADVVVGERTPELAQLVGEAGEAPADDGVHIEGLYLVRILGDEVAQLVPQLQGMGQWGRVSGSVMEGVALPPSCRLPAGPPGSWTCRP
Nucleotide Sequence ATGGCCGCTGCGGATGTAGTAGTCGGCGAGAGAACACCAGAGCTTGCCCAGCTGGTCGGTGAAGCGGGTGAGGCCCCCGCGGATGATGGCGTCCACATTGAGGGACTGTACCTTGTCCGGATTCTGGGAGATGAGGTCGCACAGCTCGTGCCACAGCTGCAGGGCATGGGGCAGTGGGGGAGAGTCTCAGGCTCAGTCATGGAGGGGGTGGCCCTCCCACCCAGTTGCCGGCTCCCGGCAGGCCCACCTGGTAGTTGGACTTGCCGGCCTTAG

CircID chr19:7625880|7626171
ORF Type ORF2
Protein Length 80
Nucleotide Length 240
Protein Sequence MPSWSVKRVRPPRMMASTLRDCTLSGFWEMRSHSSCHSCRAWGSGGESQAQSWRGWPSHPVAGSRQAHLVVGLAGLRHET
Nucleotide Sequence TTGCCCAGCTGGTCGGTGAAGCGGGTGAGGCCCCCGCGGATGATGGCGTCCACATTGAGGGACTGTACCTTGTCCGGATTCTGGGAGATGAGGTCGCACAGCTCGTGCCACAGCTGCAGGGCATGGGGCAGTGGGGGAGAGTCTCAGGCTCAGTCATGGAGGGGGTGGCCCTCCCACCCAGTTGCCGGCTCCCGGCAGGCCCACCTGGTAGTTGGACTTGCCGGCCTTAGACACGAAACG

CircID chr19:7625880|7626171
ORF Type ORF3
Protein Length 68
Nucleotide Length 204
Protein Sequence MSLRLSPTAPCPAAVARAVRPHLPESGQGTVPQCGRHHPRGPHPLHRPAGQALVFSRRLLHPQRPFRE
Nucleotide Sequence CTGAGCCTGAGACTCTCCCCCACTGCCCCATGCCCTGCAGCTGTGGCACGAGCTGTGCGACCTCATCTCCCAGAATCCGGACAAGGTACAGTCCCTCAATGTGGACGCCATCATCCGCGGGGGCCTCACCCGCTTCACCGACCAGCTGGGCAAGCTCTGGTGTTCTCTCGCCGACTACTACATCCGCAGCGGCCATTTCGAGAA

CircID chr19:7625880|7626171
ORF Type ORF4
Protein Length 61
Nucleotide Length 183
Protein Sequence MPHALQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEK
Nucleotide Sequence CTGCCCCATGCCCTGCAGCTGTGGCACGAGCTGTGCGACCTCATCTCCCAGAATCCGGACAAGGTACAGTCCCTCAATGTGGACGCCATCATCCGCGGGGGCCTCACCCGCTTCACCGACCAGCTGGGCAAGCTCTGGTGTTCTCTCGCCGACTACTACATCCGCAGCGGCCATTTCGAGAAG

CircID chr19:7625880|7626171
ORF Type ORF5
Protein Length 77
Nucleotide Length 231
Protein Sequence MGGRATPSMTEPETLPHCPMPCSCGTSCATSSPRIRTRYSPSMWTPSSAGASPASPTSWASSGVLSPTTTSAAAISR
Nucleotide Sequence CTGGGTGGGAGGGCCACCCCCTCCATGACTGAGCCTGAGACTCTCCCCCACTGCCCCATGCCCTGCAGCTGTGGCACGAGCTGTGCGACCTCATCTCCCAGAATCCGGACAAGGTACAGTCCCTCAATGTGGACGCCATCATCCGCGGGGGCCTCACCCGCTTCACCGACCAGCTGGGCAAGCTCTGGTGTTCTCTCGCCGACTACTACATCCGCAGCGGCCATTTCGAGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites