CircRNA Information

General Information
circRNA Basic Information
CircID chr19:763704|763930
Strand -
CircType exon
Host Gene ENSG00000099812.7;
Algorism CIRI2;
Sequence CACAGCTCATCTGCCAACAATCCCACCATGGGCACATTTGGGACTGTTGGGTTTTTCGTTTCCGTTTCTATCTTCCTTTAGAAATGTTTCTGCCTTTGGGGTCTAAAGCTTTTGGGGATGAAATGGGACCCCTGCTGATTCTTTCTGCTTCTAAGACTTTGCCAAATGCCCTGGGTCTAAGAAAGAAAGAGACCCGCTCCTCCACTTTCAGGTGTAATTTGCTTCCG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr19:763704|763930 hsa-miR-96-5p 0 0 1
chr19:763704|763930 hsa-miR-96-3p 0 0 1
chr19:763704|763930 hsa-miR-182-5p 0 0 1
chr19:763704|763930 hsa-miR-182-3p 0 0 1
chr19:763704|763930 hsa-miR-212-5p 0 0 1
chr19:763704|763930 hsa-miR-212-3p 0 0 1
chr19:763704|763930 hsa-miR-214-5p 0 0 1
chr19:763704|763930 hsa-miR-214-3p 0 0 1
chr19:763704|763930 hsa-miR-132-5p 0 0 1
chr19:763704|763930 hsa-miR-132-3p 0 0 1
chr19:763704|763930 hsa-miR-191-5p 0 0 1
chr19:763704|763930 hsa-miR-191-3p 0 0 1
chr19:763704|763930 hsa-miR-186-5p 0 0 1
chr19:763704|763930 hsa-miR-186-3p 0 0 1
chr19:763704|763930 hsa-miR-494-5p 0 0 1
chr19:763704|763930 hsa-miR-494-3p 0 0 1
chr19:763704|763930 hsa-miR-558 0 0 1
chr19:763704|763930 hsa-miR-1264 0 0 1
chr19:763704|763930 hsa-miR-1271-5p 0 0 1
chr19:763704|763930 hsa-miR-1271-3p 0 0 1
chr19:763704|763930 hsa-miR-765 0 0 1
chr19:763704|763930 hsa-miR-541-5p 0 0 1
chr19:763704|763930 hsa-miR-541-3p 0 0 1
chr19:763704|763930 hsa-miR-922 0 0 1
chr19:763704|763930 hsa-miR-615-5p 0 0 1
chr19:763704|763930 hsa-miR-654-5p 0 0 1
chr19:763704|763930 hsa-miR-455-5p 0 1 1
chr19:763704|763930 hsa-miR-556-5p 0 0 1
chr19:763704|763930 hsa-miR-576-5p 0 0 1
chr19:763704|763930 hsa-miR-548d-3p 0 1 1
chr19:763704|763930 hsa-miR-595 0 1 0
chr19:763704|763930 hsa-miR-3612 1 0 0
chr19:763704|763930 hsa-miR-4449 1 0 0
chr19:763704|763930 hsa-miR-4534 1 0 0
chr19:763704|763930 hsa-miR-4654 0 1 0
chr19:763704|763930 hsa-miR-5090 1 0 0
chr19:763704|763930 hsa-miR-12114 1 0 0
chr19:763704|763930 hsa-miR-671-5p 1 0 0
chr19:763704|763930 hsa-miR-6784-5p 1 0 0
chr19:763704|763930 hsa-miR-6753-5p 1 0 0
chr19:763704|763930 hsa-miR-324-5p 0 1 0
chr19:763704|763930 hsa-miR-6828-5p 1 1 0
chr19:763704|763930 hsa-miR-519d-5p 0 1 0
chr19:763704|763930 hsa-miR-5089-5p 0 1 0
chr19:763704|763930 hsa-miR-3688-5p 0 1 0
chr19:763704|763930 hsa-miR-6775-5p 1 0 0
chr19:763704|763930 hsa-miR-11181-3p 0 1 0
chr19:763704|763930 hsa-miR-6722-3p 0 1 0
chr19:763704|763930 hsa-miR-1915-3p 1 0 0
chr19:763704|763930 hsa-miR-4685-5p 1 0 0
chr19:763704|763930 hsa-miR-4769-5p 0 1 0
chr19:763704|763930 hsa-miR-1266-5p 1 0 0
chr19:763704|763930 hsa-miR-1910-3p 0 1 0
chr19:763704|763930 hsa-miR-6511a-5p 0 1 0
chr19:763704|763930 hsa-miR-6837-5p 1 0 0
chr19:763704|763930 hsa-miR-6764-5p 1 1 0
chr19:763704|763930 hsa-miR-4509 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr19:763704|763930
ORF Type ORF1
Protein Length 31
Nucleotide Length 96
Protein Sequence MPTIPPWAHLGLLGFSFPFLSSFRNVSAFGV
Nucleotide Sequence CTGCCAACAATCCCACCATGGGCACATTTGGGACTGTTGGGTTTTTCGTTTCCGTTTCTATCTTCCTTTAGAAATGTTTCTGCCTTTGGGGTCTAA
CircID chr19:763704|763930
ORF Type ORF2
Protein Length 48
Nucleotide Length 144
Protein Sequence MFLPLGSKAFGDEMGPLLILSASKTLPNALGLRKKETRSSTFRCNLLP
Nucleotide Sequence ATGTTTCTGCCTTTGGGGTCTAAAGCTTTTGGGGATGAAATGGGACCCCTGCTGATTCTTTCTGCTTCTAAGACTTTGCCAAATGCCCTGGGTCTAAGAAAGAAAGAGACCCGCTCCTCCACTTTCAGGTGTAATTTGCTTCCG
CircID chr19:763704|763930
ORF Type ORF3
Protein Length 47
Nucleotide Length 144
Protein Sequence MKVEERVSFFLRPRAFGKVLEAERISRGPISSPKALDPKGRNISKGR
Nucleotide Sequence CTGAAAGTGGAGGAGCGGGTCTCTTTCTTTCTTAGACCCAGGGCATTTGGCAAAGTCTTAGAAGCAGAAAGAATCAGCAGGGGTCCCATTTCATCCCCAAAAGCTTTAGACCCCAAAGGCAGAAACATTTCTAAAGGAAGATAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab