CircNet

General Information

circRNA Basic Information

CircID	chr1:100270557\|100277316
Strand	+
CircType	exon
Host Gene	ENSG00000137996.12;
Algorism	CIRI2;find_circ;DCC;
Sequence	GAGTGTGTGCCTCTTGATGCAGGTCTCAATGCCGTGTGTTCTCTTTGCTGCTTCTCCATCAGAACTTCATTTGAAAGGTGGAACTAATGCTGAAATGGCACCACAGATCGATTATACAGTGATGGTCTTCAAGCCAATTGTTGAAAAATTTGGTTTCATATTTAATTGTGACATTAAAACAAGGTAGCAAAAGATATGGCAGCGGCAGCAGTTAGATGCATCAGAAAGGAGATCCGGGATTTGTATGTTAACATCCAGCCTGTTCAAGAACCTAAAGACCAAGCATTTGGCAATGGAAATGGAATAATAATTATTGCTGAGACCTCCACTGGCTGTTTGTTTGCTGGATCATCGCTTGGTAAACGAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:100270557\|100277316
ORF Type	ORF1
Protein Length	57
Nucleotide Length	171
Protein Sequence	MQVSMPCVLFAASPSELHLKGGTNAEMAPQIDYTVMVFKPIVEKFGFIFNCDIKTR*
Nucleotide Sequence	ATGCAGGTCTCAATGCCGTGTGTTCTCTTTGCTGCTTCTCCATCAGAACTTCATTTGAAAGGTGGAACTAATGCTGAAATGGCACCACAGATCGATTATACAGTGATGGTCTTCAAGCCAATTGTTGAAAAATTTGGTTTCATATTTAATTGTGACATTAAAACAAGGTAG

CircID	chr1:100270557\|100277316
ORF Type	ORF2
Protein Length	57
Nucleotide Length	171
Protein Sequence	MAAAAVRCIRKEIRDLYVNIQPVQEPKDQAFGNGNGIIIIAETSTGCLFAGSSLGKR
Nucleotide Sequence	ATGGCAGCGGCAGCAGTTAGATGCATCAGAAAGGAGATCCGGGATTTGTATGTTAACATCCAGCCTGTTCAAGAACCTAAAGACCAAGCATTTGGCAATGGAAATGGAATAATAATTATTGCTGAGACCTCCACTGGCTGTTTGTTTGCTGGATCATCGCTTGGTAAACGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:100270557\|100277316	NOP56	1	1	0
chr1:100270557\|100277316	ELAVL1	2	4	1
chr1:100270557\|100277316	FAM120A	0	0	1
chr1:100270557\|100277316	PRPF8	0	1	0
chr1:100270557\|100277316	TROVE2	0	1	0
chr1:100270557\|100277316	FUS	0	1	0
chr1:100270557\|100277316	SRSF7	0	0	1
chr1:100270557\|100277316	SRSF1	0	6	2
chr1:100270557\|100277316	NOP58	0	2	3
chr1:100270557\|100277316	SRSF3	0	1	0
chr1:100270557\|100277316	U2AF1	1	0	0
chr1:100270557\|100277316	U2AF2	4	1	7
chr1:100270557\|100277316	RBM10	0	2	0
chr1:100270557\|100277316	HNRNPL	0	2	0
chr1:100270557\|100277316	HNRNPC	1	4	0
chr1:100270557\|100277316	TRA2A	0	0	1
chr1:100270557\|100277316	DHX9	0	0	1
chr1:100270557\|100277316	ACIN1	0	0	7
chr1:100270557\|100277316	LIN28B	0	0	7
chr1:100270557\|100277316	IGF2BP1	0	0	1
chr1:100270557\|100277316	IGF2BP2	0	2	3
chr1:100270557\|100277316	TARDBP	0	0	1
chr1:100270557\|100277316	BUD13	1	0	0
chr1:100270557\|100277316	RBM47	0	0	2
chr1:100270557\|100277316	AGO2	0	0	2
chr1:100270557\|100277316	AGO1	0	0	2
chr1:100270557\|100277316	EIF4A3	1	1	8
chr1:100270557\|100277316	FBL	1	0	0

CircRNA Information