CircRNA Information

General Information
circRNA Basic Information
CircID chr1:10463165|10463512
Strand -
CircType exon
Host Gene ENSG00000160049.10;
Algorism CIRI2;
Sequence CCGTGTCTACTGCATCCACCTCCTCACCAAAGGCAGCTTTGGACTCTGCAAAGGAGACACGAGACAGAGATCAGACGTGGTGTGACCACACAGCCACATGAACAACTCGCCAGAATAACTGGCCGGGCAAGAGAGAAACGTGCCCGTCCCGCATCCCAGCAGCCGCGGCTTCAGTGGCCCTGGCTACATCACAAATAGTGTCCTCCCAAGGGACGCCTCCATCAGCCCTGAATTCTCAGAGTGACTCTGCCTGCAGAGAGTCCTACCTTCCTGCTTTGACAAGAGGCTGCCCTCTTTCTCCAAAGCCTGGAGGTACAGCTGCAGGAGCTGCTTGGACTGACGCACTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:10463165|10463512 hsa-miR-22-5p 0 0 1
chr1:10463165|10463512 hsa-miR-22-3p 0 0 1
chr1:10463165|10463512 hsa-miR-187-5p 0 0 1
chr1:10463165|10463512 hsa-miR-187-3p 0 0 1
chr1:10463165|10463512 hsa-miR-320a-5p 0 0 1
chr1:10463165|10463512 hsa-miR-320a-3p 0 0 1
chr1:10463165|10463512 hsa-miR-575 0 0 1
chr1:10463165|10463512 hsa-miR-580-5p 0 0 1
chr1:10463165|10463512 hsa-miR-580-3p 0 0 1
chr1:10463165|10463512 hsa-miR-583 0 0 1
chr1:10463165|10463512 hsa-miR-620 0 0 1
chr1:10463165|10463512 hsa-miR-623 0 1 1
chr1:10463165|10463512 hsa-miR-646 0 0 1
chr1:10463165|10463512 hsa-miR-650 0 0 1
chr1:10463165|10463512 hsa-miR-411-5p 0 0 1
chr1:10463165|10463512 hsa-miR-411-3p 0 0 1
chr1:10463165|10463512 hsa-miR-758-5p 0 0 1
chr1:10463165|10463512 hsa-miR-758-3p 0 0 1
chr1:10463165|10463512 hsa-miR-668-5p 0 0 1
chr1:10463165|10463512 hsa-miR-668-3p 0 0 1
chr1:10463165|10463512 hsa-miR-1301-5p 0 0 1
chr1:10463165|10463512 hsa-miR-1301-3p 0 0 1
chr1:10463165|10463512 hsa-miR-936 0 0 1
chr1:10463165|10463512 hsa-miR-1228-5p 0 0 1
chr1:10463165|10463512 hsa-miR-1228-3p 0 0 1
chr1:10463165|10463512 hsa-miR-1205 0 0 1
chr1:10463165|10463512 hsa-miR-1206 0 0 1
chr1:10463165|10463512 hsa-miR-1270 0 0 1
chr1:10463165|10463512 hsa-miR-1197 0 0 1
chr1:10463165|10463512 hsa-miR-1184 0 1 1
chr1:10463165|10463512 hsa-miR-330-3p 0 0 1
chr1:10463165|10463512 hsa-miR-320b 0 1 1
chr1:10463165|10463512 hsa-miR-320c 0 1 1
chr1:10463165|10463512 hsa-miR-320d 0 0 1
chr1:10463165|10463512 hsa-miR-455-3p 0 0 1
chr1:10463165|10463512 hsa-miR-9 0 0 1
chr1:10463165|10463512 hsa-miR-644 0 0 1
chr1:10463165|10463512 hsa-miR-768-5p 0 0 1
chr1:10463165|10463512 hsa-miR-220a 0 0 1
chr1:10463165|10463512 hsa-miR-147 0 0 1
chr1:10463165|10463512 hsa-miR-1183 1 0 0
chr1:10463165|10463512 hsa-miR-1295a 1 0 0
chr1:10463165|10463512 hsa-miR-3165 0 1 0
chr1:10463165|10463512 hsa-miR-4252 0 1 0
chr1:10463165|10463512 hsa-miR-3621 1 0 0
chr1:10463165|10463512 hsa-miR-3918 0 1 0
chr1:10463165|10463512 hsa-miR-4443 0 1 0
chr1:10463165|10463512 hsa-miR-4466 1 0 0
chr1:10463165|10463512 hsa-miR-4467 1 0 0
chr1:10463165|10463512 hsa-miR-3689c 1 1 0
chr1:10463165|10463512 hsa-miR-4488 1 0 0
chr1:10463165|10463512 hsa-miR-4510 1 0 0
chr1:10463165|10463512 hsa-miR-3960 1 0 0
chr1:10463165|10463512 hsa-miR-4651 1 0 0
chr1:10463165|10463512 hsa-miR-4656 0 1 0
chr1:10463165|10463512 hsa-miR-4660 0 1 0
chr1:10463165|10463512 hsa-miR-4692 0 1 0
chr1:10463165|10463512 hsa-miR-4706 1 0 0
chr1:10463165|10463512 hsa-miR-4710 1 1 0
chr1:10463165|10463512 hsa-miR-4718 0 1 0
chr1:10463165|10463512 hsa-miR-4734 1 0 0
chr1:10463165|10463512 hsa-miR-4739 1 0 0
chr1:10463165|10463512 hsa-miR-4741 1 0 0
chr1:10463165|10463512 hsa-miR-5047 0 1 0
chr1:10463165|10463512 hsa-miR-6127 1 0 0
chr1:10463165|10463512 hsa-miR-6130 1 0 0
chr1:10463165|10463512 hsa-miR-6134 1 0 0
chr1:10463165|10463512 hsa-miR-6165 0 1 0
chr1:10463165|10463512 hsa-miR-7974 0 1 0
chr1:10463165|10463512 hsa-miR-8075 0 1 0
chr1:10463165|10463512 hsa-miR-1843 0 1 0
chr1:10463165|10463512 hsa-miR-11401 0 1 0
chr1:10463165|10463512 hsa-miR-12119 1 0 0
chr1:10463165|10463512 hsa-miR-29a-5p 0 1 0
chr1:10463165|10463512 hsa-miR-6765-5p 1 0 0
chr1:10463165|10463512 hsa-miR-6825-5p 1 0 0
chr1:10463165|10463512 hsa-miR-6894-5p 1 0 0
chr1:10463165|10463512 hsa-miR-4687-3p 1 0 0
chr1:10463165|10463512 hsa-miR-6799-5p 1 0 0
chr1:10463165|10463512 hsa-miR-3692-5p 0 1 0
chr1:10463165|10463512 hsa-miR-139-3p 1 0 0
chr1:10463165|10463512 hsa-miR-6089 1 0 0
chr1:10463165|10463512 hsa-miR-3192-5p 1 0 0
chr1:10463165|10463512 hsa-miR-6757-5p 1 0 0
chr1:10463165|10463512 hsa-miR-6880-5p 0 1 0
chr1:10463165|10463512 hsa-miR-4695-5p 1 0 0
chr1:10463165|10463512 hsa-miR-7154-3p 0 1 0
chr1:10463165|10463512 hsa-miR-6727-5p 1 0 0
chr1:10463165|10463512 hsa-miR-4474-3p 0 1 0
chr1:10463165|10463512 hsa-miR-181a-2-3p 0 1 0
chr1:10463165|10463512 hsa-miR-6829-5p 1 0 0
chr1:10463165|10463512 hsa-miR-7855-5p 0 1 0
chr1:10463165|10463512 hsa-miR-30b-3p 1 0 0
chr1:10463165|10463512 hsa-miR-6850-5p 1 0 0
chr1:10463165|10463512 hsa-miR-5088-5p 1 0 0
chr1:10463165|10463512 hsa-miR-7109-5p 1 0 0
chr1:10463165|10463512 hsa-miR-185-5p 0 1 0
chr1:10463165|10463512 hsa-miR-4786-3p 1 0 0
chr1:10463165|10463512 hsa-miR-6784-5p 1 0 0
chr1:10463165|10463512 hsa-miR-4640-5p 1 0 0
chr1:10463165|10463512 hsa-miR-3691-5p 0 1 0
chr1:10463165|10463512 hsa-miR-3127-5p 0 1 0
chr1:10463165|10463512 hsa-miR-7161-3p 1 0 0
chr1:10463165|10463512 hsa-miR-296-3p 1 1 0
chr1:10463165|10463512 hsa-miR-6771-5p 1 0 0
chr1:10463165|10463512 hsa-miR-92b-5p 1 1 0
chr1:10463165|10463512 hsa-miR-3648 1 0 0
chr1:10463165|10463512 hsa-miR-4787-5p 1 0 0
chr1:10463165|10463512 hsa-miR-149-3p 1 0 0
chr1:10463165|10463512 hsa-miR-3616-3p 0 1 0
chr1:10463165|10463512 hsa-miR-6736-3p 0 1 0
chr1:10463165|10463512 hsa-miR-6789-5p 1 0 0
chr1:10463165|10463512 hsa-miR-887-5p 0 1 0
chr1:10463165|10463512 hsa-miR-1289 0 1 0
chr1:10463165|10463512 hsa-miR-6854-3p 0 1 0
chr1:10463165|10463512 hsa-miR-4746-5p 1 0 0
chr1:10463165|10463512 hsa-miR-4714-5p 0 1 0
chr1:10463165|10463512 hsa-miR-6888-3p 1 1 0
chr1:10463165|10463512 hsa-miR-1185-5p 0 1 0
chr1:10463165|10463512 hsa-miR-10400-5p 1 0 0
chr1:10463165|10463512 hsa-miR-1207-5p 1 0 0
chr1:10463165|10463512 hsa-miR-1233-5p 1 0 0
chr1:10463165|10463512 hsa-miR-1273h-5p 1 0 0
chr1:10463165|10463512 hsa-miR-3689b-3p 1 1 0
chr1:10463165|10463512 hsa-miR-4763-3p 1 0 0
chr1:10463165|10463512 hsa-miR-6778-5p 1 0 0
chr1:10463165|10463512 hsa-miR-6812-5p 1 0 0
chr1:10463165|10463512 hsa-miR-6816-5p 1 0 0
chr1:10463165|10463512 hsa-miR-1343-5p 1 0 0
chr1:10463165|10463512 hsa-miR-6756-5p 1 0 0
chr1:10463165|10463512 hsa-miR-6803-5p 1 0 0
chr1:10463165|10463512 hsa-miR-6851-5p 1 1 0
chr1:10463165|10463512 hsa-miR-6722-3p 1 0 0
chr1:10463165|10463512 hsa-miR-6779-5p 1 1 0
chr1:10463165|10463512 hsa-miR-6780a-5p 1 0 0
chr1:10463165|10463512 hsa-miR-6808-5p 1 1 0
chr1:10463165|10463512 hsa-miR-6879-5p 0 1 0
chr1:10463165|10463512 hsa-miR-4728-5p 1 0 0
chr1:10463165|10463512 hsa-miR-1237-5p 1 0 0
chr1:10463165|10463512 hsa-miR-3689a-3p 1 0 0
chr1:10463165|10463512 hsa-miR-4685-5p 1 1 0
chr1:10463165|10463512 hsa-miR-4726-5p 1 0 0
chr1:10463165|10463512 hsa-miR-4749-5p 1 0 0
chr1:10463165|10463512 hsa-miR-675-5p 1 0 0
chr1:10463165|10463512 hsa-miR-6795-5p 1 0 0
chr1:10463165|10463512 hsa-miR-6858-5p 1 1 0
chr1:10463165|10463512 hsa-miR-6883-5p 1 0 0
chr1:10463165|10463512 hsa-miR-6887-5p 1 0 0
chr1:10463165|10463512 hsa-miR-6511a-5p 0 1 0
chr1:10463165|10463512 hsa-miR-6511b-5p 1 1 0
chr1:10463165|10463512 hsa-miR-1914-3p 1 0 0
chr1:10463165|10463512 hsa-miR-4665-5p 1 0 0
chr1:10463165|10463512 hsa-miR-4646-5p 1 0 0
chr1:10463165|10463512 hsa-miR-6785-5p 1 0 0
chr1:10463165|10463512 hsa-miR-6762-5p 0 1 0
chr1:10463165|10463512 hsa-miR-6837-5p 0 1 0
chr1:10463165|10463512 hsa-miR-4768-5p 0 1 0
chr1:10463165|10463512 hsa-miR-6876-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr1:10463165|10463512
ORF Type ORF1
Protein Length 62
Nucleotide Length 189
Protein Sequence MHPPPHQRQLWTLQRRHETEIRRGVTTQPHEQLARITGRAREKRARPASQQPRLQWPWLHHK
Nucleotide Sequence CTGCATCCACCTCCTCACCAAAGGCAGCTTTGGACTCTGCAAAGGAGACACGAGACAGAGATCAGACGTGGTGTGACCACACAGCCACATGAACAACTCGCCAGAATAACTGGCCGGGCAAGAGAGAAACGTGCCCGTCCCGCATCCCAGCAGCCGCGGCTTCAGTGGCCCTGGCTACATCACAAATAG
CircID chr1:10463165|10463512
ORF Type ORF2
Protein Length 41
Nucleotide Length 126
Protein Sequence MAGQERNVPVPHPSSRGFSGPGYITNSVLPRDASISPEFSE
Nucleotide Sequence CTGGCCGGGCAAGAGAGAAACGTGCCCGTCCCGCATCCCAGCAGCCGCGGCTTCAGTGGCCCTGGCTACATCACAAATAGTGTCCTCCCAAGGGACGCCTCCATCAGCCCTGAATTCTCAGAGTGA
CircID chr1:10463165|10463512
ORF Type ORF3
Protein Length 29
Nucleotide Length 90
Protein Sequence MQRVLPSCFDKRLPSFSKAWRYSCRSCLD
Nucleotide Sequence CTGCAGAGAGTCCTACCTTCCTGCTTTGACAAGAGGCTGCCCTCTTTCTCCAAAGCCTGGAGGTACAGCTGCAGGAGCTGCTTGGACTGA
CircID chr1:10463165|10463512
ORF Type ORF4
Protein Length 56
Nucleotide Length 168
Protein Sequence MATSQIVSSQGTPPSALNSQSDSACRESYLPALTRGCPLSPKPGGTAAGAAWTDAL
Nucleotide Sequence CTGGCTACATCACAAATAGTGTCCTCCCAAGGGACGCCTCCATCAGCCCTGAATTCTCAGAGTGACTCTGCCTGCAGAGAGTCCTACCTTCCTGCTTTGACAAGAGGCTGCCCTCTTTCTCCAAAGCCTGGAGGTACAGCTGCAGGAGCTGCTTGGACTGACGCACTT
CircID chr1:10463165|10463512
ORF Type ORF5
Protein Length 46
Nucleotide Length 141
Protein Sequence MQLYLQALEKEGSLLSKQEGRTLCRQSHSENSGLMEASLGRTLFVM
Nucleotide Sequence CTGCAGCTGTACCTCCAGGCTTTGGAGAAAGAGGGCAGCCTCTTGTCAAAGCAGGAAGGTAGGACTCTCTGCAGGCAGAGTCACTCTGAGAATTCAGGGCTGATGGAGGCGTCCCTTGGGAGGACACTATTTGTGATGTAG
CircID chr1:10463165|10463512
ORF Type ORF6
Protein Length 55
Nucleotide Length 168
Protein Sequence MKPRLLGCGTGTFLSCPASYSGELFMWLCGHTTSDLCLVSPLQSPKLPLVRRWMQ
Nucleotide Sequence CTGAAGCCGCGGCTGCTGGGATGCGGGACGGGCACGTTTCTCTCTTGCCCGGCCAGTTATTCTGGCGAGTTGTTCATGTGGCTGTGTGGTCACACCACGTCTGATCTCTGTCTCGTGTCTCCTTTGCAGAGTCCAAAGCTGCCTTTGGTGAGGAGGTGGATGCAGTAG
CircID chr1:10463165|10463512
ORF Type ORF7
Protein Length 29
Nucleotide Length 90
Protein Sequence MASCSCGCVVTPRLISVSCLLCRVQSCLW
Nucleotide Sequence CTGGCGAGTTGTTCATGTGGCTGTGTGGTCACACCACGTCTGATCTCTGTCTCGTGTCTCCTTTGCAGAGTCCAAAGCTGCCTTTGGTGA
CircID chr1:10463165|10463512
ORF Type ORF8
Protein Length 27
Nucleotide Length 84
Protein Sequence MRDGHVSLLPGQLFWRVVHVAVWSHHV
Nucleotide Sequence ATGCGGGACGGGCACGTTTCTCTCTTGCCCGGCCAGTTATTCTGGCGAGTTGTTCATGTGGCTGTGTGGTCACACCACGTCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab