CircRNA Information

General Information
circRNA Basic Information
CircID chr1:1055642|1055831
Strand +
CircType exon
Host Gene ENSG00000188157.12;
Algorism CIRI2;
Sequence TGACGCTGTGGGGAGGATTTGCAGTGAGGCAGCCCTCAGCCGCTCTCAGGCGAGATGGGAAAGATGAGACCCACCACTCCAGGGGTCAAATAAAATCAACACATGAAGAACACAGCCATGGCCAGGCCCAGATACCCAGGCAGGCGGCAGAGGTCAACCCCATCCCACAGTGAGCTCCTCTCGATAGCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:1055642|1055831 hsa-miR-192-5p 0 0 1
chr1:1055642|1055831 hsa-miR-192-3p 0 0 1
chr1:1055642|1055831 hsa-miR-215-5p 0 0 1
chr1:1055642|1055831 hsa-miR-215-3p 0 0 1
chr1:1055642|1055831 hsa-miR-122-5p 0 0 1
chr1:1055642|1055831 hsa-miR-122-3p 0 0 1
chr1:1055642|1055831 hsa-miR-563 0 0 1
chr1:1055642|1055831 hsa-miR-612 1 0 1
chr1:1055642|1055831 hsa-miR-661 1 1 1
chr1:1055642|1055831 hsa-miR-541-5p 0 0 1
chr1:1055642|1055831 hsa-miR-541-3p 0 0 1
chr1:1055642|1055831 hsa-miR-708-5p 0 0 1
chr1:1055642|1055831 hsa-miR-708-3p 0 0 1
chr1:1055642|1055831 hsa-miR-1208 0 0 1
chr1:1055642|1055831 hsa-miR-193a-5p 0 0 1
chr1:1055642|1055831 hsa-miR-654-5p 0 0 1
chr1:1055642|1055831 hsa-miR-28-5p 0 1 1
chr1:1055642|1055831 hsa-miR-331-3p 0 0 1
chr1:1055642|1055831 hsa-miR-1285 0 0 1
chr1:1055642|1055831 hsa-miR-1254 0 0 1
chr1:1055642|1055831 hsa-miR-608 1 0 0
chr1:1055642|1055831 hsa-miR-151b 1 1 0
chr1:1055642|1055831 hsa-miR-762 1 0 0
chr1:1055642|1055831 hsa-miR-1268a 1 0 0
chr1:1055642|1055831 hsa-miR-2861 1 1 0
chr1:1055642|1055831 hsa-miR-3139 1 1 0
chr1:1055642|1055831 hsa-miR-4308 0 1 0
chr1:1055642|1055831 hsa-miR-1268b 1 0 0
chr1:1055642|1055831 hsa-miR-4486 1 0 0
chr1:1055642|1055831 hsa-miR-4507 1 0 0
chr1:1055642|1055831 hsa-miR-4523 1 0 0
chr1:1055642|1055831 hsa-miR-1587 1 0 0
chr1:1055642|1055831 hsa-miR-4651 1 0 0
chr1:1055642|1055831 hsa-miR-4654 0 1 0
chr1:1055642|1055831 hsa-miR-4656 1 0 0
chr1:1055642|1055831 hsa-miR-4706 1 0 0
chr1:1055642|1055831 hsa-miR-4739 1 0 0
chr1:1055642|1055831 hsa-miR-4741 0 1 0
chr1:1055642|1055831 hsa-miR-6069 1 0 0
chr1:1055642|1055831 hsa-miR-6071 1 0 0
chr1:1055642|1055831 hsa-miR-6078 0 1 0
chr1:1055642|1055831 hsa-miR-6860 1 0 0
chr1:1055642|1055831 hsa-miR-7974 1 1 0
chr1:1055642|1055831 hsa-miR-11400 1 0 0
chr1:1055642|1055831 hsa-miR-370-3p 1 0 0
chr1:1055642|1055831 hsa-miR-6861-5p 1 1 0
chr1:1055642|1055831 hsa-miR-7106-5p 1 0 0
chr1:1055642|1055831 hsa-miR-4687-3p 1 0 0
chr1:1055642|1055831 hsa-miR-6854-5p 1 0 0
chr1:1055642|1055831 hsa-miR-7114-5p 1 0 0
chr1:1055642|1055831 hsa-miR-6759-5p 1 0 0
chr1:1055642|1055831 hsa-miR-3187-3p 0 1 0
chr1:1055642|1055831 hsa-miR-6742-5p 1 0 0
chr1:1055642|1055831 hsa-miR-6796-5p 1 0 0
chr1:1055642|1055831 hsa-miR-6782-5p 1 0 0
chr1:1055642|1055831 hsa-miR-6882-3p 0 1 0
chr1:1055642|1055831 hsa-miR-5088-5p 1 0 0
chr1:1055642|1055831 hsa-miR-1226-5p 0 1 0
chr1:1055642|1055831 hsa-miR-6749-5p 1 0 0
chr1:1055642|1055831 hsa-miR-6821-3p 0 1 0
chr1:1055642|1055831 hsa-miR-299-3p 1 0 0
chr1:1055642|1055831 hsa-miR-6830-3p 0 1 0
chr1:1055642|1055831 hsa-miR-1304-3p 0 1 0
chr1:1055642|1055831 hsa-miR-3158-3p 0 1 0
chr1:1055642|1055831 hsa-miR-106b-3p 1 0 0
chr1:1055642|1055831 hsa-miR-6837-3p 1 0 0
chr1:1055642|1055831 hsa-miR-4649-3p 1 0 0
chr1:1055642|1055831 hsa-miR-6761-5p 0 1 0
chr1:1055642|1055831 hsa-miR-3670 1 0 0
chr1:1055642|1055831 hsa-miR-6759-3p 0 1 0
chr1:1055642|1055831 hsa-miR-4485-5p 0 1 0
chr1:1055642|1055831 hsa-miR-6816-5p 1 0 0
chr1:1055642|1055831 hsa-miR-1343-5p 1 0 0
chr1:1055642|1055831 hsa-miR-6726-5p 1 0 0
chr1:1055642|1055831 hsa-miR-6737-5p 0 1 0
chr1:1055642|1055831 hsa-miR-6756-5p 1 0 0
chr1:1055642|1055831 hsa-miR-6819-5p 1 0 0
chr1:1055642|1055831 hsa-miR-6779-5p 1 0 0
chr1:1055642|1055831 hsa-miR-3620-5p 1 0 0
chr1:1055642|1055831 hsa-miR-5189-5p 1 0 0
chr1:1055642|1055831 hsa-miR-5196-5p 1 0 0
chr1:1055642|1055831 hsa-miR-4632-5p 1 0 0
chr1:1055642|1055831 hsa-miR-4745-5p 1 0 0
chr1:1055642|1055831 hsa-miR-3187-5p 1 0 0
chr1:1055642|1055831 hsa-miR-939-5p 1 0 0
chr1:1055642|1055831 hsa-miR-4769-5p 0 1 0
chr1:1055642|1055831 hsa-miR-3940-5p 1 0 0
chr1:1055642|1055831 hsa-miR-6856-5p 1 0 0
chr1:1055642|1055831 hsa-miR-1271-3p 1 0 0
chr1:1055642|1055831 hsa-miR-6877-3p 1 0 0
chr1:1055642|1055831 hsa-miR-6724-5p 1 0 0
chr1:1055642|1055831 hsa-miR-10398-5p 1 0 0
chr1:1055642|1055831 hsa-miR-6791-5p 1 0 0
chr1:1055642|1055831 hsa-miR-330-5p 1 0 0
chr1:1055642|1055831 hsa-miR-151a-5p 1 1 0
chr1:1055642|1055831 hsa-miR-6820-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:1055642|1055831
ORF Type ORF1
Protein Length 29
Nucleotide Length 87
Protein Sequence MKNTAMARPRYPGRRQRSTPSHSELLSIA
Nucleotide Sequence ATGAAGAACACAGCCATGGCCAGGCCCAGATACCCAGGCAGGCGGCAGAGGTCAACCCCATCCCACAGTGAGCTCCTCTCGATAGCC

CircID chr1:1055642|1055831
ORF Type ORF2
Protein Length 55
Nucleotide Length 168
Protein Sequence MWGGFAVRQPSAALRRDGKDETHHSRGQIKSTHEEHSHGQAQIPRQAAEVNPIPQ
Nucleotide Sequence CTGTGGGGAGGATTTGCAGTGAGGCAGCCCTCAGCCGCTCTCAGGCGAGATGGGAAAGATGAGACCCACCACTCCAGGGGTCAAATAAAATCAACACATGAAGAACACAGCCATGGCCAGGCCCAGATACCCAGGCAGGCGGCAGAGGTCAACCCCATCCCACAGTGA

CircID chr1:1055642|1055831
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence MGLTSAACLGIWAWPWLCSSCVDFI
Nucleotide Sequence ATGGGGTTGACCTCTGCCGCCTGCCTGGGTATCTGGGCCTGGCCATGGCTGTGTTCTTCATGTGTTGATTTTATTTGA

CircID chr1:1055642|1055831
ORF Type ORF4
Protein Length 27
Nucleotide Length 81
Protein Sequence MEWWVSSFPSRLRAAEGCLTANPPHSV
Nucleotide Sequence CTGGAGTGGTGGGTCTCATCTTTCCCATCTCGCCTGAGAGCGGCTGAGGGCTGCCTCACTGCAAATCCTCCCCACAGCGTC

CircID chr1:1055642|1055831
ORF Type ORF5
Protein Length 34
Nucleotide Length 105
Protein Sequence MPPAWVSGPGHGCVLHVLILFDPWSGGSHLSHLA
Nucleotide Sequence CTGCCGCCTGCCTGGGTATCTGGGCCTGGCCATGGCTGTGTTCTTCATGTGTTGATTTTATTTGACCCCTGGAGTGGTGGGTCTCATCTTTCCCATCTCGCCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites