CircNet

General Information

circRNA Basic Information

CircID	chr1:107617609\|107642738
Strand	-
CircType	exon
Host Gene	ENSG00000134215.14;
Algorism	CIRI2;
Sequence	CTCTCCAGATGCTAAATTTCTGCCCTGCCAAAACAGACTGTGTGCATCTCCTTTCAGAAGTTCAACGGTATCCCCGGCCTGGAGCTGTAAAGGGGGTCCTTCATGCAGAGCTGGGGGTGGTGTTCCAGAATAGTTCCTAATGAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:107617609\|107642738	hsa-miR-96-5p	0	0	1
chr1:107617609\|107642738	hsa-miR-96-3p	0	0	1
chr1:107617609\|107642738	hsa-miR-182-5p	0	0	1
chr1:107617609\|107642738	hsa-miR-182-3p	0	0	1
chr1:107617609\|107642738	hsa-miR-185-5p	0	0	1
chr1:107617609\|107642738	hsa-miR-185-3p	0	0	1
chr1:107617609\|107642738	hsa-miR-488-5p	0	0	1
chr1:107617609\|107642738	hsa-miR-488-3p	0	0	1
chr1:107617609\|107642738	hsa-miR-622	0	1	1
chr1:107617609\|107642738	hsa-miR-1271-5p	0	0	1
chr1:107617609\|107642738	hsa-miR-1271-3p	0	0	1
chr1:107617609\|107642738	hsa-miR-1299	0	0	1
chr1:107617609\|107642738	hsa-miR-1252-5p	0	0	1
chr1:107617609\|107642738	hsa-miR-1252-3p	0	0	1
chr1:107617609\|107642738	hsa-miR-542-5p	0	0	1
chr1:107617609\|107642738	hsa-miR-361-3p	0	1	1
chr1:107617609\|107642738	hsa-miR-875-3p	0	0	1
chr1:107617609\|107642738	hsa-miR-1207-5p	1	0	1
chr1:107617609\|107642738	hsa-miR-220b	0	0	1
chr1:107617609\|107642738	hsa-miR-516b	0	0	1
chr1:107617609\|107642738	hsa-miR-611	1	0	0
chr1:107617609\|107642738	hsa-miR-3132	1	0	0
chr1:107617609\|107642738	hsa-miR-5090	1	0	0
chr1:107617609\|107642738	hsa-miR-6132	0	1	0
chr1:107617609\|107642738	hsa-miR-6860	1	0	0
chr1:107617609\|107642738	hsa-miR-7150	1	1	0
chr1:107617609\|107642738	hsa-miR-6089	1	0	0
chr1:107617609\|107642738	hsa-miR-6727-5p	1	0	0
chr1:107617609\|107642738	hsa-miR-197-5p	1	0	0
chr1:107617609\|107642738	hsa-miR-6888-5p	1	1	0
chr1:107617609\|107642738	hsa-miR-5006-5p	1	0	0
chr1:107617609\|107642738	hsa-miR-1229-5p	1	0	0
chr1:107617609\|107642738	hsa-miR-6749-5p	1	0	0
chr1:107617609\|107642738	hsa-miR-4640-3p	0	1	0
chr1:107617609\|107642738	hsa-miR-6859-3p	0	1	0
chr1:107617609\|107642738	hsa-miR-4763-3p	1	0	0
chr1:107617609\|107642738	hsa-miR-6787-5p	1	0	0
chr1:107617609\|107642738	hsa-miR-6780a-5p	1	0	0
chr1:107617609\|107642738	hsa-miR-6879-5p	1	0	0
chr1:107617609\|107642738	hsa-miR-6836-5p	1	0	0
chr1:107617609\|107642738	hsa-miR-328-5p	1	0	0
chr1:107617609\|107642738	hsa-miR-6735-5p	1	0	0
chr1:107617609\|107642738	hsa-miR-4436b-3p	0	1	0
chr1:107617609\|107642738	hsa-miR-122b-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:107617609\|107642738
ORF Type	ORF1
Protein Length	37
Nucleotide Length	114
Protein Sequence	MPCQNRLCASPFRSSTVSPAWSCKGGPSCRAGGGVPE
Nucleotide Sequence	CTGCCCTGCCAAAACAGACTGTGTGCATCTCCTTTCAGAAGTTCAACGGTATCCCCGGCCTGGAGCTGTAAAGGGGGTCCTTCATGCAGAGCTGGGGGTGGTGTTCCAGAATAG

CircID	chr1:107617609\|107642738
ORF Type	ORF2
Protein Length	43
Nucleotide Length	132
Protein Sequence	MLNFCPAKTDCVHLLSEVQRYPRPGAVKGVLHAELGVVFQNSS
Nucleotide Sequence	ATGCTAAATTTCTGCCCTGCCAAAACAGACTGTGTGCATCTCCTTTCAGAAGTTCAACGGTATCCCCGGCCTGGAGCTGTAAAGGGGGTCCTTCATGCAGAGCTGGGGGTGGTGTTCCAGAATAGTTCCTAA

CircID	chr1:107617609\|107642738
ORF Type	ORF3
Protein Length	36
Nucleotide Length	108
Protein Sequence	MHEGPPLQLQAGDTVELLKGDAHSLFWQGRNLASGE
Nucleotide Sequence	CTGCATGAAGGACCCCCTTTACAGCTCCAGGCCGGGGATACCGTTGAACTTCTGAAAGGAGATGCACACAGTCTGTTTTGGCAGGGCAGAAATTTAGCATCTGGAGAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information