CircNet

General Information

circRNA Basic Information

CircID	chr1:108148279\|108155068
Strand	-
CircType	exon
Host Gene	ENSG00000085491.15;
Algorism	CIRI2;
Sequence	GTATCCGCTCGCTTTGGAGGGGAAATGGTACAAACGTCATCAAAATTGCTCCTGAGACAGCTGTTAAATTCTGGGCATATGAACAGTACAAGAAGTTACTTACTGAAGAAGGACAAAAAATAGGAACATTTGAGAGATTTATTTCTGGTTCCATGGCTGGAGCAACTGCACAGACTTTTATATATCCAATGGAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:108148279\|108155068
ORF Type	ORF1
Protein Length	51
Nucleotide Length	153
Protein Sequence	MEPEINLSNVPIFCPSSVSNFLYCSYAQNLTAVSGAILMTFVPFPLQSERI
Nucleotide Sequence	ATGGAACCAGAAATAAATCTCTCAAATGTTCCTATTTTTTGTCCTTCTTCAGTAAGTAACTTCTTGTACTGTTCATATGCCCAGAATTTAACAGCTGTCTCAGGAGCAATTTTGATGACGTTTGTACCATTTCCCCTCCAAAGCGAGCGGATA

CircID	chr1:108148279\|108155068
ORF Type	ORF2
Protein Length	33
Nucleotide Length	99
Protein Sequence	MVQTSSKLLLRQLLNSGHMNSTRSYLLKKDKK*
Nucleotide Sequence	ATGGTACAAACGTCATCAAAATTGCTCCTGAGACAGCTGTTAAATTCTGGGCATATGAACAGTACAAGAAGTTACTTACTGAAGAAGGACAAAAAATAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:108148279\|108155068	U2AF2	54	2	1
chr1:108148279\|108155068	ELAVL1	25	2	0
chr1:108148279\|108155068	ZRANB2	4	0	0
chr1:108148279\|108155068	SF3B4	7	0	0
chr1:108148279\|108155068	SF3B1	2	0	0
chr1:108148279\|108155068	PRPF8	2	1	0
chr1:108148279\|108155068	CNBP	0	0	1
chr1:108148279\|108155068	RPS5	1	0	0
chr1:108148279\|108155068	UPF1	3	1	0
chr1:108148279\|108155068	FMR1	4	0	6
chr1:108148279\|108155068	CPSF6	8	3	1
chr1:108148279\|108155068	NUDT21	6	0	0
chr1:108148279\|108155068	CSTF2	16	16	0
chr1:108148279\|108155068	RBM15B	2	0	0
chr1:108148279\|108155068	CPSF1	2	0	0
chr1:108148279\|108155068	FUS	3	0	0
chr1:108148279\|108155068	CPSF7	14	1	1
chr1:108148279\|108155068	SRSF1	13	0	0
chr1:108148279\|108155068	NOP58	0	0	1
chr1:108148279\|108155068	SRSF7	1	0	0
chr1:108148279\|108155068	U2AF1	5	0	0
chr1:108148279\|108155068	KHSRP	7	0	2
chr1:108148279\|108155068	DDX54	5	3	9
chr1:108148279\|108155068	HNRNPM	0	1	0
chr1:108148279\|108155068	RBM15	4	0	0
chr1:108148279\|108155068	SF3A3	2	0	0
chr1:108148279\|108155068	FIP1L1	2	2	0
chr1:108148279\|108155068	PTBP1	7	2	0
chr1:108148279\|108155068	HNRNPC	61	2	5
chr1:108148279\|108155068	HNRNPD	1	0	0
chr1:108148279\|108155068	HNRNPA1	18	1	1
chr1:108148279\|108155068	DDX3X	8	0	0
chr1:108148279\|108155068	WDR33	0	3	0
chr1:108148279\|108155068	SMNDC1	2	0	0
chr1:108148279\|108155068	ACIN1	2	0	2
chr1:108148279\|108155068	XRCC6	1	0	0
chr1:108148279\|108155068	LIN28B	2	0	1
chr1:108148279\|108155068	LIN28A	1	0	0
chr1:108148279\|108155068	FXR1	1	0	2
chr1:108148279\|108155068	FXR2	1	0	1
chr1:108148279\|108155068	SND1	1	0	1
chr1:108148279\|108155068	IGF2BP1	4	0	2
chr1:108148279\|108155068	IGF2BP2	5	1	7
chr1:108148279\|108155068	TARDBP	9	1	0
chr1:108148279\|108155068	NCBP3	1	0	0
chr1:108148279\|108155068	YTHDC1	4	0	0
chr1:108148279\|108155068	BUD13	1	0	0
chr1:108148279\|108155068	RBM47	0	0	1
chr1:108148279\|108155068	RTCB	2	0	0
chr1:108148279\|108155068	CSTF2T	6	2	3
chr1:108148279\|108155068	SRRM4	4	0	0
chr1:108148279\|108155068	TIA1	6	0	0
chr1:108148279\|108155068	YBX3	1	0	0
chr1:108148279\|108155068	TIAL1	11	0	0
chr1:108148279\|108155068	DKC1	0	1	0
chr1:108148279\|108155068	AGO2	1	0	3
chr1:108148279\|108155068	ATXN2	1	0	0
chr1:108148279\|108155068	EIF4A3	2	1	4
chr1:108148279\|108155068	FBL	1	1	1

CircRNA Information